Experiment: Glucuronamide (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06755 and ABID97_RS06760 are separated by 125 nucleotides ABID97_RS06760 and ABID97_RS06765 are separated by 1 nucleotides ABID97_RS06765 and ABID97_RS06770 are separated by 82 nucleotides
ABID97_RS06755: ABID97_RS06755 - putative Na+/H+ antiporter, at 1,424,563 to 1,425,822
_RS06755
ABID97_RS06760: ABID97_RS06760 - XRE family transcriptional regulator, at 1,425,948 to 1,426,535
_RS06760
ABID97_RS06765: ABID97_RS06765 - GNAT family N-acetyltransferase, at 1,426,537 to 1,427,076
_RS06765
ABID97_RS06770: ABID97_RS06770 - CapA family protein, at 1,427,159 to 1,430,422
_RS06770
Position (kb)
1426
1427
1428 Strain fitness (log2 ratio)
-1
0
1
2 at 1425.598 kb on + strand, within ABID97_RS06755 at 1425.599 kb on - strand, within ABID97_RS06755 at 1425.640 kb on + strand, within ABID97_RS06755 at 1425.640 kb on + strand, within ABID97_RS06755 at 1425.640 kb on + strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.934 kb on - strand at 1426.323 kb on + strand, within ABID97_RS06760 at 1426.323 kb on + strand, within ABID97_RS06760 at 1426.464 kb on + strand, within ABID97_RS06760 at 1426.464 kb on + strand, within ABID97_RS06760 at 1426.465 kb on - strand, within ABID97_RS06760 at 1426.465 kb on - strand, within ABID97_RS06760 at 1426.465 kb on - strand, within ABID97_RS06760 at 1426.467 kb on + strand, within ABID97_RS06760 at 1426.467 kb on + strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.495 kb on - strand at 1426.495 kb on - strand at 1426.972 kb on + strand, within ABID97_RS06765 at 1426.973 kb on - strand, within ABID97_RS06765 at 1427.053 kb on + strand at 1427.053 kb on + strand at 1427.053 kb on + strand at 1427.053 kb on + strand at 1427.053 kb on + strand at 1427.054 kb on - strand at 1427.054 kb on - strand at 1427.480 kb on + strand at 1427.481 kb on - strand at 1427.481 kb on - strand at 1427.481 kb on - strand at 1427.481 kb on - strand at 1427.481 kb on - strand at 1427.481 kb on - strand at 1427.561 kb on + strand, within ABID97_RS06770 at 1427.561 kb on + strand, within ABID97_RS06770 at 1427.561 kb on + strand, within ABID97_RS06770 at 1427.562 kb on - strand, within ABID97_RS06770 at 1427.696 kb on + strand, within ABID97_RS06770 at 1427.696 kb on + strand, within ABID97_RS06770 at 1427.814 kb on - strand, within ABID97_RS06770 at 1427.814 kb on - strand, within ABID97_RS06770 at 1427.891 kb on + strand, within ABID97_RS06770 at 1427.891 kb on + strand, within ABID97_RS06770 at 1427.891 kb on + strand, within ABID97_RS06770 at 1427.892 kb on - strand, within ABID97_RS06770 at 1427.892 kb on - strand, within ABID97_RS06770 at 1427.921 kb on + strand, within ABID97_RS06770 at 1427.921 kb on + strand, within ABID97_RS06770 at 1427.921 kb on + strand, within ABID97_RS06770 at 1428.050 kb on + strand, within ABID97_RS06770
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (C) remove 1,425,598 + ABID97_RS06755 0.82 -0.4 1,425,599 - ABID97_RS06755 0.82 -0.2 1,425,640 + ABID97_RS06755 0.85 -0.1 1,425,640 + ABID97_RS06755 0.85 -0.3 1,425,640 + ABID97_RS06755 0.85 +0.5 1,425,641 - ABID97_RS06755 0.86 +0.2 1,425,641 - ABID97_RS06755 0.86 +0.1 1,425,641 - ABID97_RS06755 0.86 +0.2 1,425,641 - ABID97_RS06755 0.86 +0.4 1,425,641 - ABID97_RS06755 0.86 -0.2 1,425,641 - ABID97_RS06755 0.86 -0.2 1,425,934 - +0.4 1,426,323 + ABID97_RS06760 0.64 +1.2 1,426,323 + ABID97_RS06760 0.64 +2.5 1,426,464 + ABID97_RS06760 0.88 +0.0 1,426,464 + ABID97_RS06760 0.88 -0.5 1,426,465 - ABID97_RS06760 0.88 -0.4 1,426,465 - ABID97_RS06760 0.88 -0.5 1,426,465 - ABID97_RS06760 0.88 -0.0 1,426,467 + ABID97_RS06760 0.88 +0.4 1,426,467 + ABID97_RS06760 0.88 +0.1 1,426,468 - ABID97_RS06760 0.88 -0.1 1,426,468 - ABID97_RS06760 0.88 -0.1 1,426,468 - ABID97_RS06760 0.88 +0.4 1,426,468 - ABID97_RS06760 0.88 +0.1 1,426,468 - ABID97_RS06760 0.88 +1.5 1,426,468 - ABID97_RS06760 0.88 +1.0 1,426,495 - +1.8 1,426,495 - +0.1 1,426,972 + ABID97_RS06765 0.81 -0.8 1,426,973 - ABID97_RS06765 0.81 -1.3 1,427,053 + -0.9 1,427,053 + +0.4 1,427,053 + +0.5 1,427,053 + +1.4 1,427,053 + -0.1 1,427,054 - -0.3 1,427,054 - -0.5 1,427,480 + -0.2 1,427,481 - -0.2 1,427,481 - -0.2 1,427,481 - +0.4 1,427,481 - +0.1 1,427,481 - -0.1 1,427,481 - +0.2 1,427,561 + ABID97_RS06770 0.12 -0.4 1,427,561 + ABID97_RS06770 0.12 +0.2 1,427,561 + ABID97_RS06770 0.12 -0.0 1,427,562 - ABID97_RS06770 0.12 -0.1 1,427,696 + ABID97_RS06770 0.16 +0.4 1,427,696 + ABID97_RS06770 0.16 +0.3 1,427,814 - ABID97_RS06770 0.20 -0.1 1,427,814 - ABID97_RS06770 0.20 +1.1 1,427,891 + ABID97_RS06770 0.22 +2.0 1,427,891 + ABID97_RS06770 0.22 +0.4 1,427,891 + ABID97_RS06770 0.22 -0.0 1,427,892 - ABID97_RS06770 0.22 -0.2 1,427,892 - ABID97_RS06770 0.22 +0.1 1,427,921 + ABID97_RS06770 0.23 +1.2 1,427,921 + ABID97_RS06770 0.23 +0.6 1,427,921 + ABID97_RS06770 0.23 -0.0 1,428,050 + ABID97_RS06770 0.27 -0.1
Or see this region's nucleotide sequence