Experiment: Glucuronamide (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02710 and ABID97_RS02715 are separated by 12 nucleotides ABID97_RS02715 and ABID97_RS02720 are separated by 151 nucleotides ABID97_RS02720 and ABID97_RS02725 overlap by 4 nucleotides
ABID97_RS02710: ABID97_RS02710 - metallophosphoesterase, at 552,703 to 553,890
_RS02710
ABID97_RS02715: ABID97_RS02715 - polyhydroxyalkanoate granule-associated phasin, at 553,903 to 554,400
_RS02715
ABID97_RS02720: ABID97_RS02720 - lysylphosphatidylglycerol synthase domain-containing protein, at 554,552 to 555,520
_RS02720
ABID97_RS02725: ABID97_RS02725 - cardiolipin synthase ClsB, at 555,517 to 556,797
_RS02725
Position (kb) 554
555
556 Strain fitness (log2 ratio) -2
-1
0
1
2 at 553.795 kb on + strand at 553.795 kb on + strand at 553.795 kb on + strand at 553.795 kb on + strand at 553.795 kb on + strand at 553.796 kb on - strand at 553.796 kb on - strand at 553.796 kb on - strand at 553.796 kb on - strand at 553.796 kb on - strand at 553.796 kb on - strand at 553.980 kb on + strand, within ABID97_RS02715 at 553.980 kb on + strand, within ABID97_RS02715 at 553.981 kb on - strand, within ABID97_RS02715 at 553.981 kb on - strand, within ABID97_RS02715 at 554.434 kb on + strand at 554.434 kb on + strand at 554.435 kb on - strand at 554.435 kb on - strand at 554.436 kb on + strand at 554.436 kb on + strand at 554.436 kb on + strand at 554.436 kb on + strand at 554.436 kb on + strand at 554.436 kb on + strand at 554.437 kb on - strand at 554.437 kb on - strand at 554.437 kb on - strand at 554.437 kb on - strand at 554.437 kb on - strand at 554.437 kb on - strand at 554.544 kb on + strand at 554.553 kb on + strand at 554.607 kb on + strand at 554.608 kb on - strand at 554.640 kb on + strand at 554.640 kb on + strand at 554.640 kb on + strand at 554.640 kb on + strand at 554.640 kb on + strand at 554.640 kb on + strand at 554.641 kb on - strand at 554.641 kb on - strand at 554.641 kb on - strand at 554.643 kb on + strand at 554.643 kb on + strand at 554.643 kb on + strand at 554.644 kb on - strand at 554.644 kb on - strand at 554.644 kb on - strand at 554.644 kb on - strand at 554.655 kb on + strand, within ABID97_RS02720 at 554.656 kb on - strand, within ABID97_RS02720 at 554.656 kb on - strand, within ABID97_RS02720 at 554.806 kb on - strand, within ABID97_RS02720 at 554.971 kb on - strand, within ABID97_RS02720 at 554.971 kb on - strand, within ABID97_RS02720 at 554.990 kb on + strand, within ABID97_RS02720 at 554.990 kb on + strand, within ABID97_RS02720 at 554.990 kb on + strand, within ABID97_RS02720 at 554.991 kb on - strand, within ABID97_RS02720 at 554.991 kb on - strand, within ABID97_RS02720 at 555.090 kb on + strand, within ABID97_RS02720 at 555.165 kb on + strand, within ABID97_RS02720 at 555.165 kb on + strand, within ABID97_RS02720 at 555.166 kb on - strand, within ABID97_RS02720 at 555.166 kb on - strand, within ABID97_RS02720 at 555.225 kb on + strand, within ABID97_RS02720 at 555.225 kb on + strand, within ABID97_RS02720 at 555.225 kb on + strand, within ABID97_RS02720 at 555.226 kb on - strand, within ABID97_RS02720 at 555.226 kb on - strand, within ABID97_RS02720 at 555.300 kb on + strand, within ABID97_RS02720 at 555.300 kb on + strand, within ABID97_RS02720 at 555.300 kb on + strand, within ABID97_RS02720 at 555.300 kb on + strand, within ABID97_RS02720 at 555.300 kb on + strand, within ABID97_RS02720 at 555.300 kb on + strand, within ABID97_RS02720 at 555.300 kb on + strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.301 kb on - strand, within ABID97_RS02720 at 555.309 kb on + strand, within ABID97_RS02720 at 555.309 kb on + strand, within ABID97_RS02720 at 555.309 kb on + strand, within ABID97_RS02720 at 555.310 kb on - strand, within ABID97_RS02720 at 555.310 kb on - strand, within ABID97_RS02720 at 555.310 kb on - strand, within ABID97_RS02720 at 555.470 kb on + strand at 555.471 kb on - strand at 555.662 kb on + strand, within ABID97_RS02725 at 555.971 kb on + strand, within ABID97_RS02725 at 555.972 kb on - strand, within ABID97_RS02725 at 555.972 kb on - strand, within ABID97_RS02725 at 556.097 kb on + strand, within ABID97_RS02725 at 556.098 kb on - strand, within ABID97_RS02725 at 556.098 kb on - strand, within ABID97_RS02725 at 556.098 kb on - strand, within ABID97_RS02725 at 556.098 kb on - strand, within ABID97_RS02725 at 556.098 kb on - strand, within ABID97_RS02725 at 556.148 kb on + strand, within ABID97_RS02725 at 556.148 kb on + strand, within ABID97_RS02725 at 556.352 kb on + strand, within ABID97_RS02725 at 556.352 kb on + strand, within ABID97_RS02725 at 556.400 kb on + strand, within ABID97_RS02725 at 556.401 kb on - strand, within ABID97_RS02725 at 556.401 kb on - strand, within ABID97_RS02725 at 556.401 kb on - strand, within ABID97_RS02725
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (C) remove 553,795 + +0.4 553,795 + +1.0 553,795 + -0.1 553,795 + -0.1 553,795 + -0.4 553,796 - +0.9 553,796 - +0.2 553,796 - -0.4 553,796 - +0.5 553,796 - +0.0 553,796 - +0.1 553,980 + ABID97_RS02715 0.15 -0.7 553,980 + ABID97_RS02715 0.15 -1.4 553,981 - ABID97_RS02715 0.16 -0.1 553,981 - ABID97_RS02715 0.16 -1.2 554,434 + -1.0 554,434 + -0.8 554,435 - -0.6 554,435 - +0.1 554,436 + -0.1 554,436 + -0.1 554,436 + -0.2 554,436 + +0.4 554,436 + +0.5 554,436 + -0.2 554,437 - -0.3 554,437 - +0.1 554,437 - -0.2 554,437 - +0.3 554,437 - -0.2 554,437 - +0.1 554,544 + -0.4 554,553 + +0.1 554,607 + +0.2 554,608 - +0.1 554,640 + -0.8 554,640 + -0.4 554,640 + +0.8 554,640 + -0.3 554,640 + -0.7 554,640 + -0.6 554,641 - -1.0 554,641 - +1.0 554,641 - -0.2 554,643 + -0.2 554,643 + -0.2 554,643 + -0.4 554,644 - +1.0 554,644 - +1.4 554,644 - -0.2 554,644 - +0.1 554,655 + ABID97_RS02720 0.11 -0.5 554,656 - ABID97_RS02720 0.11 -0.0 554,656 - ABID97_RS02720 0.11 -0.2 554,806 - ABID97_RS02720 0.26 +0.6 554,971 - ABID97_RS02720 0.43 -0.5 554,971 - ABID97_RS02720 0.43 +0.9 554,990 + ABID97_RS02720 0.45 -0.4 554,990 + ABID97_RS02720 0.45 -0.5 554,990 + ABID97_RS02720 0.45 -0.1 554,991 - ABID97_RS02720 0.45 -0.5 554,991 - ABID97_RS02720 0.45 -1.0 555,090 + ABID97_RS02720 0.56 -0.5 555,165 + ABID97_RS02720 0.63 -0.9 555,165 + ABID97_RS02720 0.63 +0.4 555,166 - ABID97_RS02720 0.63 +0.0 555,166 - ABID97_RS02720 0.63 -0.5 555,225 + ABID97_RS02720 0.69 -0.3 555,225 + ABID97_RS02720 0.69 -0.6 555,225 + ABID97_RS02720 0.69 -0.5 555,226 - ABID97_RS02720 0.70 -0.0 555,226 - ABID97_RS02720 0.70 -0.3 555,300 + ABID97_RS02720 0.77 -0.0 555,300 + ABID97_RS02720 0.77 -0.6 555,300 + ABID97_RS02720 0.77 +0.5 555,300 + ABID97_RS02720 0.77 -0.4 555,300 + ABID97_RS02720 0.77 -0.5 555,300 + ABID97_RS02720 0.77 -0.9 555,300 + ABID97_RS02720 0.77 -0.3 555,301 - ABID97_RS02720 0.77 -0.2 555,301 - ABID97_RS02720 0.77 +0.3 555,301 - ABID97_RS02720 0.77 +0.1 555,301 - ABID97_RS02720 0.77 -0.4 555,301 - ABID97_RS02720 0.77 -0.0 555,301 - ABID97_RS02720 0.77 +0.8 555,301 - ABID97_RS02720 0.77 -0.2 555,301 - ABID97_RS02720 0.77 -0.2 555,301 - ABID97_RS02720 0.77 +1.8 555,301 - ABID97_RS02720 0.77 +0.4 555,301 - ABID97_RS02720 0.77 -1.3 555,309 + ABID97_RS02720 0.78 -1.2 555,309 + ABID97_RS02720 0.78 -0.2 555,309 + ABID97_RS02720 0.78 -0.9 555,310 - ABID97_RS02720 0.78 -0.6 555,310 - ABID97_RS02720 0.78 -0.1 555,310 - ABID97_RS02720 0.78 -1.0 555,470 + +0.8 555,471 - +0.3 555,662 + ABID97_RS02725 0.11 -0.5 555,971 + ABID97_RS02725 0.35 -0.4 555,972 - ABID97_RS02725 0.36 +0.1 555,972 - ABID97_RS02725 0.36 +0.2 556,097 + ABID97_RS02725 0.45 -1.3 556,098 - ABID97_RS02725 0.45 +0.1 556,098 - ABID97_RS02725 0.45 +0.1 556,098 - ABID97_RS02725 0.45 -2.4 556,098 - ABID97_RS02725 0.45 -0.1 556,098 - ABID97_RS02725 0.45 -1.4 556,148 + ABID97_RS02725 0.49 +0.4 556,148 + ABID97_RS02725 0.49 -0.1 556,352 + ABID97_RS02725 0.65 -0.0 556,352 + ABID97_RS02725 0.65 +1.2 556,400 + ABID97_RS02725 0.69 +0.4 556,401 - ABID97_RS02725 0.69 +0.1 556,401 - ABID97_RS02725 0.69 -0.4 556,401 - ABID97_RS02725 0.69 -0.2
Or see this region's nucleotide sequence