Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_871 and PfGW456L13_872 overlap by 20 nucleotides PfGW456L13_872 and PfGW456L13_873 are separated by 206 nucleotides
PfGW456L13_871 - Sterol desaturase, at 977,596 to 978,831
_871
PfGW456L13_872 - FIG139438: lipoprotein B, at 978,812 to 979,444
_872
PfGW456L13_873 - Porphobilinogen synthase (EC 4.2.1.24), at 979,651 to 980,664
_873
Position (kb) 978
979
980 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 977.867 kb on - strand, within PfGW456L13_871 at 977.869 kb on + strand, within PfGW456L13_871 at 977.869 kb on + strand, within PfGW456L13_871 at 977.869 kb on + strand, within PfGW456L13_871 at 977.870 kb on - strand, within PfGW456L13_871 at 977.870 kb on - strand, within PfGW456L13_871 at 977.870 kb on - strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.944 kb on + strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.945 kb on - strand, within PfGW456L13_871 at 977.977 kb on - strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.004 kb on + strand, within PfGW456L13_871 at 978.005 kb on - strand, within PfGW456L13_871 at 978.074 kb on - strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.178 kb on + strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.179 kb on - strand, within PfGW456L13_871 at 978.193 kb on + strand, within PfGW456L13_871 at 978.193 kb on + strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.194 kb on - strand, within PfGW456L13_871 at 978.210 kb on + strand, within PfGW456L13_871 at 978.210 kb on + strand, within PfGW456L13_871 at 978.211 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.326 kb on - strand, within PfGW456L13_871 at 978.431 kb on - strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.502 kb on + strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.503 kb on - strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.526 kb on + strand, within PfGW456L13_871 at 978.527 kb on - strand, within PfGW456L13_871 at 978.527 kb on - strand, within PfGW456L13_871 at 978.527 kb on - strand, within PfGW456L13_871 at 978.544 kb on + strand, within PfGW456L13_871 at 978.544 kb on + strand, within PfGW456L13_871 at 978.545 kb on - strand, within PfGW456L13_871 at 978.701 kb on + strand, within PfGW456L13_871 at 978.766 kb on + strand at 978.766 kb on + strand at 978.767 kb on - strand at 978.793 kb on + strand at 978.793 kb on + strand at 978.793 kb on - strand at 978.794 kb on - strand at 978.794 kb on - strand at 978.794 kb on - strand at 978.794 kb on - strand at 978.829 kb on + strand at 978.972 kb on + strand, within PfGW456L13_872 at 978.972 kb on + strand, within PfGW456L13_872 at 978.972 kb on + strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 978.973 kb on - strand, within PfGW456L13_872 at 979.020 kb on + strand, within PfGW456L13_872 at 979.140 kb on + strand, within PfGW456L13_872 at 979.269 kb on + strand, within PfGW456L13_872 at 979.269 kb on + strand, within PfGW456L13_872 at 979.269 kb on + strand, within PfGW456L13_872 at 979.270 kb on - strand, within PfGW456L13_872 at 979.270 kb on - strand, within PfGW456L13_872 at 979.290 kb on + strand, within PfGW456L13_872 at 979.290 kb on + strand, within PfGW456L13_872 at 979.290 kb on + strand, within PfGW456L13_872 at 979.291 kb on - strand, within PfGW456L13_872 at 979.291 kb on - strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.335 kb on + strand, within PfGW456L13_872 at 979.336 kb on - strand, within PfGW456L13_872 at 979.336 kb on - strand, within PfGW456L13_872 at 979.336 kb on - strand, within PfGW456L13_872 at 979.364 kb on + strand, within PfGW456L13_872 at 979.397 kb on + strand at 979.414 kb on - strand at 979.477 kb on + strand at 979.534 kb on + strand at 979.535 kb on - strand at 979.535 kb on - strand at 979.583 kb on + strand at 979.584 kb on - strand at 979.584 kb on - strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.586 kb on + strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.587 kb on - strand at 979.597 kb on + strand at 979.598 kb on - strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.608 kb on + strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.609 kb on - strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.610 kb on + strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.611 kb on - strand at 979.781 kb on + strand, within PfGW456L13_873 at 979.782 kb on - strand, within PfGW456L13_873 at 980.089 kb on + strand, within PfGW456L13_873 at 980.090 kb on - strand, within PfGW456L13_873 at 980.254 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.266 kb on + strand, within PfGW456L13_873 at 980.267 kb on - strand, within PfGW456L13_873 at 980.278 kb on + strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.279 kb on - strand, within PfGW456L13_873 at 980.282 kb on - strand, within PfGW456L13_873 at 980.344 kb on + strand, within PfGW456L13_873 at 980.345 kb on - strand, within PfGW456L13_873 at 980.443 kb on + strand, within PfGW456L13_873 at 980.443 kb on + strand, within PfGW456L13_873 at 980.443 kb on + strand, within PfGW456L13_873 at 980.444 kb on - strand, within PfGW456L13_873
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 977,867 - PfGW456L13_871 0.22 -0.9 977,869 + PfGW456L13_871 0.22 -1.7 977,869 + PfGW456L13_871 0.22 +0.3 977,869 + PfGW456L13_871 0.22 +0.8 977,870 - PfGW456L13_871 0.22 -0.2 977,870 - PfGW456L13_871 0.22 +1.9 977,870 - PfGW456L13_871 0.22 -2.3 977,944 + PfGW456L13_871 0.28 +0.7 977,944 + PfGW456L13_871 0.28 +0.6 977,944 + PfGW456L13_871 0.28 -2.1 977,944 + PfGW456L13_871 0.28 -1.1 977,945 - PfGW456L13_871 0.28 -0.2 977,945 - PfGW456L13_871 0.28 +0.5 977,945 - PfGW456L13_871 0.28 -1.4 977,945 - PfGW456L13_871 0.28 +1.4 977,945 - PfGW456L13_871 0.28 -0.9 977,945 - PfGW456L13_871 0.28 +1.6 977,945 - PfGW456L13_871 0.28 +0.2 977,977 - PfGW456L13_871 0.31 +0.9 978,004 + PfGW456L13_871 0.33 -1.8 978,004 + PfGW456L13_871 0.33 -0.2 978,004 + PfGW456L13_871 0.33 -1.1 978,004 + PfGW456L13_871 0.33 -0.0 978,004 + PfGW456L13_871 0.33 -0.4 978,005 - PfGW456L13_871 0.33 +0.7 978,074 - PfGW456L13_871 0.39 -0.5 978,178 + PfGW456L13_871 0.47 +0.7 978,178 + PfGW456L13_871 0.47 +0.2 978,178 + PfGW456L13_871 0.47 -0.4 978,178 + PfGW456L13_871 0.47 +0.4 978,178 + PfGW456L13_871 0.47 +0.9 978,178 + PfGW456L13_871 0.47 +1.5 978,178 + PfGW456L13_871 0.47 -1.8 978,179 - PfGW456L13_871 0.47 +1.6 978,179 - PfGW456L13_871 0.47 +0.1 978,179 - PfGW456L13_871 0.47 -1.1 978,179 - -0.8 978,179 - PfGW456L13_871 0.47 +0.7 978,179 - PfGW456L13_871 0.47 -0.6 978,179 - PfGW456L13_871 0.47 +0.5 978,179 - PfGW456L13_871 0.47 -1.4 978,179 - PfGW456L13_871 0.47 +0.8 978,179 - PfGW456L13_871 0.47 +0.2 978,179 - PfGW456L13_871 0.47 +1.3 978,193 + PfGW456L13_871 0.48 -0.1 978,193 + PfGW456L13_871 0.48 -0.2 978,194 - PfGW456L13_871 0.48 +1.3 978,194 - PfGW456L13_871 0.48 +0.9 978,194 - PfGW456L13_871 0.48 -1.2 978,194 - PfGW456L13_871 0.48 -0.7 978,194 - PfGW456L13_871 0.48 +0.6 978,210 + PfGW456L13_871 0.50 +0.1 978,210 + PfGW456L13_871 0.50 -0.4 978,211 - PfGW456L13_871 0.50 +0.7 978,326 - PfGW456L13_871 0.59 -0.3 978,326 - PfGW456L13_871 0.59 +0.2 978,326 - PfGW456L13_871 0.59 -1.0 978,326 - PfGW456L13_871 0.59 -0.5 978,431 - PfGW456L13_871 0.68 -0.2 978,502 + PfGW456L13_871 0.73 +1.1 978,502 + PfGW456L13_871 0.73 -2.9 978,502 + PfGW456L13_871 0.73 -1.0 978,502 + PfGW456L13_871 0.73 +0.5 978,503 - PfGW456L13_871 0.73 -0.3 978,503 - PfGW456L13_871 0.73 -0.3 978,503 - PfGW456L13_871 0.73 +0.7 978,503 - PfGW456L13_871 0.73 -2.0 978,503 - PfGW456L13_871 0.73 -0.8 978,503 - PfGW456L13_871 0.73 +0.3 978,526 + PfGW456L13_871 0.75 -0.5 978,526 + PfGW456L13_871 0.75 -1.0 978,526 + PfGW456L13_871 0.75 +0.8 978,526 + PfGW456L13_871 0.75 +0.1 978,526 + PfGW456L13_871 0.75 -1.2 978,527 - PfGW456L13_871 0.75 +1.9 978,527 - PfGW456L13_871 0.75 -0.5 978,527 - PfGW456L13_871 0.75 -0.2 978,544 + PfGW456L13_871 0.77 -1.2 978,544 + PfGW456L13_871 0.77 -1.8 978,545 - PfGW456L13_871 0.77 +0.9 978,701 + PfGW456L13_871 0.89 +0.0 978,766 + -0.6 978,766 + -0.2 978,767 - -2.0 978,793 + +0.3 978,793 + +1.0 978,793 - -1.3 978,794 - -0.8 978,794 - +0.7 978,794 - -0.6 978,794 - -0.9 978,829 + -0.4 978,972 + PfGW456L13_872 0.25 -1.4 978,972 + PfGW456L13_872 0.25 -2.0 978,972 + PfGW456L13_872 0.25 -2.0 978,973 - PfGW456L13_872 0.25 -2.2 978,973 - PfGW456L13_872 0.25 -1.2 978,973 - PfGW456L13_872 0.25 -1.1 978,973 - PfGW456L13_872 0.25 -2.4 978,973 - PfGW456L13_872 0.25 -1.0 978,973 - PfGW456L13_872 0.25 -1.7 978,973 - PfGW456L13_872 0.25 -1.5 978,973 - PfGW456L13_872 0.25 -1.3 978,973 - PfGW456L13_872 0.25 -1.2 979,020 + PfGW456L13_872 0.33 -0.8 979,140 + PfGW456L13_872 0.52 -1.1 979,269 + PfGW456L13_872 0.72 -1.8 979,269 + PfGW456L13_872 0.72 -2.0 979,269 + PfGW456L13_872 0.72 -1.9 979,270 - PfGW456L13_872 0.72 -2.8 979,270 - PfGW456L13_872 0.72 -1.6 979,290 + PfGW456L13_872 0.76 -1.0 979,290 + PfGW456L13_872 0.76 -1.4 979,290 + PfGW456L13_872 0.76 -2.4 979,291 - PfGW456L13_872 0.76 -2.8 979,291 - PfGW456L13_872 0.76 -1.4 979,335 + PfGW456L13_872 0.83 -0.2 979,335 + PfGW456L13_872 0.83 -0.7 979,335 + PfGW456L13_872 0.83 -0.0 979,335 + PfGW456L13_872 0.83 -1.3 979,336 - PfGW456L13_872 0.83 -2.0 979,336 - PfGW456L13_872 0.83 -1.3 979,336 - PfGW456L13_872 0.83 -1.6 979,364 + PfGW456L13_872 0.87 -1.1 979,397 + -1.6 979,414 - -1.6 979,477 + -0.7 979,534 + +0.7 979,535 - +0.5 979,535 - -0.0 979,583 + -1.0 979,584 - -0.4 979,584 - -1.4 979,586 + +0.8 979,586 + +1.7 979,586 + +1.6 979,586 + -0.5 979,586 + -0.0 979,586 + +0.9 979,586 + +1.2 979,587 - -1.7 979,587 - -0.1 979,587 - +0.6 979,587 - -0.4 979,587 - +1.3 979,587 - -1.2 979,587 - +0.1 979,587 - -1.8 979,587 - +0.8 979,587 - +1.1 979,587 - +1.3 979,587 - +1.6 979,587 - +0.6 979,587 - -0.2 979,597 + +1.6 979,598 - +0.6 979,608 + -2.8 979,608 + +0.3 979,608 + +0.8 979,608 + +1.7 979,608 + -0.9 979,609 - -2.0 979,609 - -0.1 979,609 - -2.5 979,609 - +2.0 979,609 - -0.8 979,609 - +1.4 979,609 - -0.5 979,610 + +0.7 979,610 + +0.6 979,610 + -0.8 979,610 + +0.4 979,610 + -0.7 979,610 + -0.0 979,610 + +0.3 979,610 + +0.1 979,610 + -0.5 979,610 + +1.7 979,610 + +0.3 979,611 - +0.4 979,611 - +0.8 979,611 - +0.2 979,611 - -0.4 979,611 - -0.2 979,611 - -0.2 979,611 - +0.2 979,781 + PfGW456L13_873 0.13 -0.0 979,782 - PfGW456L13_873 0.13 -0.2 980,089 + PfGW456L13_873 0.43 -0.0 980,090 - PfGW456L13_873 0.43 -1.0 980,254 + PfGW456L13_873 0.59 -0.3 980,266 + PfGW456L13_873 0.61 +1.5 980,266 + PfGW456L13_873 0.61 +0.7 980,266 + PfGW456L13_873 0.61 +0.7 980,266 + PfGW456L13_873 0.61 +1.0 980,266 + PfGW456L13_873 0.61 -2.5 980,266 + PfGW456L13_873 0.61 -0.5 980,267 - PfGW456L13_873 0.61 +0.1 980,278 + PfGW456L13_873 0.62 +1.7 980,279 - PfGW456L13_873 0.62 +0.9 980,279 - PfGW456L13_873 0.62 -0.4 980,279 - PfGW456L13_873 0.62 -0.1 980,279 - PfGW456L13_873 0.62 +0.4 980,279 - PfGW456L13_873 0.62 +0.4 980,282 - PfGW456L13_873 0.62 +0.9 980,344 + PfGW456L13_873 0.68 +1.6 980,345 - PfGW456L13_873 0.68 -1.6 980,443 + PfGW456L13_873 0.78 +1.3 980,443 + PfGW456L13_873 0.78 +0.3 980,443 + PfGW456L13_873 0.78 +0.2 980,444 - PfGW456L13_873 0.78 +0.2
Or see this region's nucleotide sequence