Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_840 and PfGW456L13_841 are separated by 186 nucleotides PfGW456L13_841 and PfGW456L13_842 overlap by 4 nucleotides PfGW456L13_842 and PfGW456L13_843 are separated by 2 nucleotides PfGW456L13_843 and PfGW456L13_844 are separated by 13 nucleotides
PfGW456L13_840 - FIG00953808: hypothetical protein, at 948,570 to 948,893
_840
PfGW456L13_841 - Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase, at 949,080 to 949,787
_841
PfGW456L13_842 - Tyrosine recombinase XerC, at 949,784 to 950,683
_842
PfGW456L13_843 - Protein of unknown function DUF484, at 950,686 to 951,411
_843
PfGW456L13_844 - Diaminopimelate epimerase (EC 5.1.1.7), at 951,425 to 952,255
_844
Position (kb) 949
950
951 Strain fitness (log2 ratio) -2
-1
0
1
2 at 948.873 kb on + strand at 948.873 kb on + strand at 948.874 kb on - strand at 948.888 kb on - strand at 948.908 kb on + strand at 949.026 kb on + strand at 949.026 kb on + strand at 949.026 kb on + strand at 949.026 kb on + strand at 949.027 kb on - strand at 949.039 kb on - strand at 949.039 kb on - strand at 949.363 kb on + strand, within PfGW456L13_841 at 949.364 kb on - strand, within PfGW456L13_841 at 949.364 kb on - strand, within PfGW456L13_841 at 949.497 kb on + strand, within PfGW456L13_841 at 949.498 kb on - strand, within PfGW456L13_841 at 949.498 kb on - strand, within PfGW456L13_841 at 949.781 kb on + strand at 949.781 kb on + strand at 949.782 kb on - strand at 949.833 kb on + strand at 949.834 kb on - strand at 949.869 kb on + strand at 949.869 kb on + strand at 949.869 kb on + strand at 949.870 kb on - strand at 949.870 kb on - strand at 949.870 kb on - strand at 950.147 kb on + strand, within PfGW456L13_842 at 950.262 kb on + strand, within PfGW456L13_842 at 950.262 kb on + strand, within PfGW456L13_842 at 950.262 kb on + strand, within PfGW456L13_842 at 950.262 kb on + strand, within PfGW456L13_842 at 950.262 kb on + strand, within PfGW456L13_842 at 950.263 kb on - strand, within PfGW456L13_842 at 950.263 kb on - strand, within PfGW456L13_842 at 950.263 kb on - strand, within PfGW456L13_842 at 950.263 kb on - strand, within PfGW456L13_842 at 950.263 kb on - strand, within PfGW456L13_842 at 950.436 kb on + strand, within PfGW456L13_842 at 950.442 kb on + strand, within PfGW456L13_842 at 950.442 kb on + strand, within PfGW456L13_842 at 950.443 kb on - strand, within PfGW456L13_842 at 950.443 kb on - strand, within PfGW456L13_842 at 950.465 kb on + strand, within PfGW456L13_842 at 950.661 kb on + strand at 950.662 kb on - strand at 950.692 kb on + strand at 950.750 kb on + strand at 950.750 kb on + strand at 950.750 kb on + strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.784 kb on - strand, within PfGW456L13_843 at 950.784 kb on - strand, within PfGW456L13_843 at 951.270 kb on + strand, within PfGW456L13_843 at 951.338 kb on - strand, within PfGW456L13_843 at 951.338 kb on - strand, within PfGW456L13_843 at 951.447 kb on + strand at 951.447 kb on + strand at 951.447 kb on + strand at 951.447 kb on + strand at 951.448 kb on - strand at 951.448 kb on - strand at 951.448 kb on - strand at 951.448 kb on - strand at 951.449 kb on + strand at 951.449 kb on + strand at 951.449 kb on + strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.537 kb on - strand, within PfGW456L13_844
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 948,873 + -1.4 948,873 + +1.2 948,874 - +0.1 948,888 - -0.0 948,908 + -0.8 949,026 + +0.3 949,026 + +1.3 949,026 + +0.2 949,026 + -0.2 949,027 - +0.1 949,039 - -2.3 949,039 - -0.1 949,363 + PfGW456L13_841 0.40 +0.5 949,364 - PfGW456L13_841 0.40 -2.5 949,364 - PfGW456L13_841 0.40 -0.5 949,497 + PfGW456L13_841 0.59 -1.2 949,498 - PfGW456L13_841 0.59 -0.5 949,498 - PfGW456L13_841 0.59 -0.5 949,781 + -1.4 949,781 + -0.0 949,782 - +0.0 949,833 + +0.3 949,834 - -1.4 949,869 + -0.0 949,869 + -0.7 949,869 + -0.5 949,870 - -2.2 949,870 - +1.0 949,870 - -0.7 950,147 + PfGW456L13_842 0.40 +0.3 950,262 + PfGW456L13_842 0.53 -0.0 950,262 + PfGW456L13_842 0.53 +0.1 950,262 + PfGW456L13_842 0.53 -0.9 950,262 + PfGW456L13_842 0.53 +0.1 950,262 + PfGW456L13_842 0.53 -1.1 950,263 - PfGW456L13_842 0.53 -1.6 950,263 - PfGW456L13_842 0.53 -0.8 950,263 - PfGW456L13_842 0.53 -1.6 950,263 - PfGW456L13_842 0.53 -0.9 950,263 - PfGW456L13_842 0.53 -1.5 950,436 + PfGW456L13_842 0.72 -1.3 950,442 + PfGW456L13_842 0.73 -0.4 950,442 + PfGW456L13_842 0.73 +0.2 950,443 - PfGW456L13_842 0.73 -2.1 950,443 - PfGW456L13_842 0.73 -0.3 950,465 + PfGW456L13_842 0.76 -1.2 950,661 + +0.5 950,662 - -1.5 950,692 + -0.6 950,750 + -0.5 950,750 + +0.2 950,750 + -0.3 950,751 - +0.1 950,751 - -1.5 950,751 - -0.9 950,751 - -1.2 950,751 - +0.1 950,751 - -2.6 950,751 - -1.9 950,751 - -2.1 950,784 - PfGW456L13_843 0.13 +0.2 950,784 - PfGW456L13_843 0.13 +1.9 951,270 + PfGW456L13_843 0.80 +1.0 951,338 - PfGW456L13_843 0.90 +0.2 951,338 - PfGW456L13_843 0.90 -1.9 951,447 + -0.8 951,447 + +0.7 951,447 + +0.6 951,447 + -2.0 951,448 - -1.3 951,448 - -0.2 951,448 - +1.0 951,448 - -0.4 951,449 + -2.7 951,449 + +0.4 951,449 + -2.3 951,450 - +0.2 951,450 - -0.9 951,450 - -0.2 951,450 - +1.1 951,450 - -0.8 951,450 - -0.0 951,450 - -0.9 951,450 - -0.1 951,450 - +0.7 951,450 - +0.1 951,450 - -0.5 951,450 - -0.2 951,450 - -0.7 951,450 - -0.1 951,450 - +0.5 951,450 - -0.8 951,537 - PfGW456L13_844 0.13 +0.1
Or see this region's nucleotide sequence