Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_783 and PfGW456L13_784 are separated by 268 nucleotides PfGW456L13_784 and PfGW456L13_785 are separated by 28 nucleotides PfGW456L13_785 and PfGW456L13_786 are separated by 393 nucleotides
PfGW456L13_783 - Protein YicC, at 887,026 to 887,889
_783
PfGW456L13_784 - Ribonuclease PH (EC 2.7.7.56), at 888,158 to 888,880
_784
PfGW456L13_785 - FIG00955116: hypothetical protein, at 888,909 to 889,277
_785
PfGW456L13_786 - Sodium/glutamate symport protein, at 889,671 to 890,879
_786
Position (kb) 888
889 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 887.674 kb on - strand, within PfGW456L13_783 at 887.719 kb on + strand, within PfGW456L13_783 at 887.719 kb on + strand, within PfGW456L13_783 at 887.720 kb on - strand, within PfGW456L13_783 at 887.720 kb on - strand, within PfGW456L13_783 at 887.895 kb on + strand at 887.896 kb on - strand at 887.953 kb on + strand at 887.954 kb on - strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.115 kb on + strand at 888.116 kb on - strand at 888.116 kb on - strand at 888.116 kb on - strand at 888.116 kb on - strand at 888.117 kb on + strand at 888.118 kb on - strand at 888.145 kb on - strand at 888.150 kb on + strand at 888.150 kb on + strand at 888.151 kb on - strand at 888.151 kb on - strand at 888.151 kb on - strand at 888.151 kb on - strand at 888.151 kb on - strand at 888.157 kb on + strand at 888.158 kb on - strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.162 kb on + strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.163 kb on - strand at 888.218 kb on + strand at 888.218 kb on + strand at 888.218 kb on + strand at 888.219 kb on - strand at 888.219 kb on - strand at 888.219 kb on - strand at 888.219 kb on - strand at 888.219 kb on - strand at 888.219 kb on - strand at 888.300 kb on + strand, within PfGW456L13_784 at 888.347 kb on + strand, within PfGW456L13_784 at 888.348 kb on - strand, within PfGW456L13_784 at 888.380 kb on - strand, within PfGW456L13_784 at 888.497 kb on + strand, within PfGW456L13_784 at 888.497 kb on + strand, within PfGW456L13_784 at 888.497 kb on + strand, within PfGW456L13_784 at 888.497 kb on + strand, within PfGW456L13_784 at 888.497 kb on + strand, within PfGW456L13_784 at 888.498 kb on - strand, within PfGW456L13_784 at 888.498 kb on - strand, within PfGW456L13_784 at 888.498 kb on - strand, within PfGW456L13_784 at 888.498 kb on - strand, within PfGW456L13_784 at 888.498 kb on - strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.662 kb on + strand, within PfGW456L13_784 at 888.663 kb on - strand, within PfGW456L13_784 at 888.663 kb on - strand, within PfGW456L13_784 at 888.663 kb on - strand, within PfGW456L13_784 at 888.663 kb on - strand, within PfGW456L13_784 at 888.663 kb on - strand, within PfGW456L13_784 at 888.663 kb on - strand, within PfGW456L13_784 at 888.663 kb on - strand, within PfGW456L13_784 at 888.693 kb on - strand, within PfGW456L13_784 at 888.693 kb on - strand, within PfGW456L13_784 at 888.732 kb on + strand, within PfGW456L13_784 at 888.908 kb on + strand at 888.908 kb on + strand at 888.908 kb on + strand at 888.908 kb on + strand at 888.908 kb on + strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 888.909 kb on - strand at 889.275 kb on + strand at 889.275 kb on + strand at 889.276 kb on - strand at 889.276 kb on - strand at 889.371 kb on - strand at 889.433 kb on - strand at 889.448 kb on - strand at 889.448 kb on - strand at 889.448 kb on - strand at 889.479 kb on + strand at 889.479 kb on + strand at 889.479 kb on + strand at 889.480 kb on - strand at 889.480 kb on - strand at 889.480 kb on - strand at 889.508 kb on + strand at 889.509 kb on - strand at 889.524 kb on - strand at 889.526 kb on + strand at 889.541 kb on - strand at 889.578 kb on + strand at 889.578 kb on + strand at 889.578 kb on + strand at 889.579 kb on - strand at 889.579 kb on - strand at 889.649 kb on + strand at 889.651 kb on + strand at 889.651 kb on + strand at 889.653 kb on + strand at 889.653 kb on + strand at 889.654 kb on - strand at 889.654 kb on - strand at 889.700 kb on - strand at 889.702 kb on + strand at 889.718 kb on - strand at 889.767 kb on + strand at 889.768 kb on - strand at 889.768 kb on - strand at 889.768 kb on - strand at 889.768 kb on - strand at 889.772 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 887,674 - PfGW456L13_783 0.75 -1.8 887,719 + PfGW456L13_783 0.80 +0.6 887,719 + PfGW456L13_783 0.80 -1.5 887,720 - PfGW456L13_783 0.80 +0.3 887,720 - PfGW456L13_783 0.80 +0.9 887,895 + +0.4 887,896 - +0.0 887,953 + -1.2 887,954 - -0.6 888,115 + -0.6 888,115 + -2.0 888,115 + -0.4 888,115 + +1.5 888,115 + -1.3 888,115 + +0.5 888,115 + -0.4 888,115 + +0.0 888,115 + -2.1 888,116 - +0.0 888,116 - +0.1 888,116 - -0.1 888,116 - +1.6 888,117 + -1.6 888,118 - -1.5 888,145 - -1.9 888,150 + -0.8 888,150 + -1.1 888,151 - -0.7 888,151 - -0.7 888,151 - -1.2 888,151 - -2.1 888,151 - +0.1 888,157 + -0.3 888,158 - +0.8 888,162 + -0.9 888,162 + -1.7 888,162 + -0.3 888,162 + +0.9 888,162 + -0.9 888,162 + +0.2 888,162 + -0.8 888,162 + +0.1 888,162 + +1.4 888,162 + -0.8 888,162 + -1.9 888,162 + -1.6 888,162 + +0.3 888,163 - -1.2 888,163 - -2.6 888,163 - -0.2 888,163 - -1.9 888,163 - -1.7 888,163 - -0.9 888,163 - -0.2 888,163 - +0.1 888,163 - -0.5 888,163 - -2.6 888,163 - -1.0 888,218 + -0.4 888,218 + +0.6 888,218 + -0.4 888,219 - -2.0 888,219 - -0.9 888,219 - -1.1 888,219 - -0.6 888,219 - -2.2 888,219 - +0.6 888,300 + PfGW456L13_784 0.20 -1.9 888,347 + PfGW456L13_784 0.26 -2.8 888,348 - PfGW456L13_784 0.26 +0.2 888,380 - PfGW456L13_784 0.31 +0.2 888,497 + PfGW456L13_784 0.47 +0.2 888,497 + PfGW456L13_784 0.47 +0.2 888,497 + PfGW456L13_784 0.47 -2.4 888,497 + PfGW456L13_784 0.47 -0.5 888,497 + PfGW456L13_784 0.47 +0.5 888,498 - PfGW456L13_784 0.47 -1.1 888,498 - PfGW456L13_784 0.47 -0.1 888,498 - PfGW456L13_784 0.47 -0.2 888,498 - PfGW456L13_784 0.47 -3.6 888,498 - PfGW456L13_784 0.47 +0.6 888,662 + PfGW456L13_784 0.70 -1.2 888,662 + PfGW456L13_784 0.70 -0.5 888,662 + PfGW456L13_784 0.70 +0.2 888,662 + PfGW456L13_784 0.70 -0.8 888,662 + PfGW456L13_784 0.70 -1.3 888,662 + PfGW456L13_784 0.70 -0.7 888,662 + PfGW456L13_784 0.70 -1.1 888,662 + PfGW456L13_784 0.70 -2.5 888,662 + PfGW456L13_784 0.70 -3.7 888,662 + PfGW456L13_784 0.70 +0.9 888,662 + PfGW456L13_784 0.70 -2.5 888,662 + PfGW456L13_784 0.70 -0.8 888,662 + PfGW456L13_784 0.70 +0.1 888,663 - PfGW456L13_784 0.70 -3.2 888,663 - PfGW456L13_784 0.70 +0.6 888,663 - PfGW456L13_784 0.70 -1.2 888,663 - PfGW456L13_784 0.70 -1.7 888,663 - PfGW456L13_784 0.70 +0.9 888,663 - PfGW456L13_784 0.70 -0.8 888,663 - PfGW456L13_784 0.70 +0.2 888,693 - PfGW456L13_784 0.74 -0.9 888,693 - PfGW456L13_784 0.74 -1.3 888,732 + PfGW456L13_784 0.79 -0.2 888,908 + +0.4 888,908 + -1.6 888,908 + +0.7 888,908 + -2.6 888,908 + +0.8 888,909 - -0.4 888,909 - +0.8 888,909 - -0.8 888,909 - +0.6 888,909 - -1.6 888,909 - -0.6 888,909 - -0.6 888,909 - -0.9 888,909 - -0.2 888,909 - -0.4 889,275 + +0.8 889,275 + +1.7 889,276 - +0.2 889,276 - -2.7 889,371 - -0.9 889,433 - -1.6 889,448 - +0.3 889,448 - +0.4 889,448 - -0.2 889,479 + +0.8 889,479 + -2.6 889,479 + +0.3 889,480 - +0.2 889,480 - -1.5 889,480 - +0.4 889,508 + +0.6 889,509 - -0.2 889,524 - -0.2 889,526 + +0.2 889,541 - -1.4 889,578 + +0.9 889,578 + +0.3 889,578 + +0.5 889,579 - -0.1 889,579 - -0.0 889,649 + +1.7 889,651 + -1.1 889,651 + +0.1 889,653 + -1.4 889,653 + -0.4 889,654 - -2.0 889,654 - +0.1 889,700 - -0.3 889,702 + -0.3 889,718 - +1.9 889,767 + -0.7 889,768 - +1.0 889,768 - -0.5 889,768 - -0.0 889,768 - -1.1 889,772 + +2.6
Or see this region's nucleotide sequence