Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_705

Experiment: Aluminum chloride 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_704 and PfGW456L13_705 are separated by 132 nucleotidesPfGW456L13_705 and PfGW456L13_706 are separated by 89 nucleotides PfGW456L13_704 - Cardiolipin synthetase (EC 2.7.8.-), at 802,546 to 803,985 _704 PfGW456L13_705 - FIG00953800: hypothetical protein, at 804,118 to 804,639 _705 PfGW456L13_706 - Threonyl-tRNA synthetase (EC 6.1.1.3), at 804,729 to 805,616 _706 Position (kb) 804 805Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.252 kb on + strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.253 kb on - strand, within PfGW456L13_704at 803.358 kb on + strand, within PfGW456L13_704at 803.359 kb on - strand, within PfGW456L13_704at 803.447 kb on + strand, within PfGW456L13_704at 803.447 kb on + strand, within PfGW456L13_704at 803.447 kb on + strand, within PfGW456L13_704at 803.447 kb on + strand, within PfGW456L13_704at 803.448 kb on - strand, within PfGW456L13_704at 803.448 kb on - strand, within PfGW456L13_704at 803.448 kb on - strand, within PfGW456L13_704at 803.448 kb on - strand, within PfGW456L13_704at 803.456 kb on + strand, within PfGW456L13_704at 803.456 kb on + strand, within PfGW456L13_704at 803.457 kb on - strand, within PfGW456L13_704at 803.457 kb on - strand, within PfGW456L13_704at 803.457 kb on - strand, within PfGW456L13_704at 803.457 kb on - strand, within PfGW456L13_704at 803.465 kb on - strand, within PfGW456L13_704at 803.595 kb on + strand, within PfGW456L13_704at 803.595 kb on + strand, within PfGW456L13_704at 803.595 kb on + strand, within PfGW456L13_704at 803.595 kb on + strand, within PfGW456L13_704at 803.596 kb on - strand, within PfGW456L13_704at 803.596 kb on - strand, within PfGW456L13_704at 803.682 kb on - strand, within PfGW456L13_704at 803.716 kb on + strand, within PfGW456L13_704at 803.789 kb on + strand, within PfGW456L13_704at 803.789 kb on + strand, within PfGW456L13_704at 803.789 kb on + strandat 803.789 kb on + strand, within PfGW456L13_704at 803.789 kb on + strand, within PfGW456L13_704at 803.790 kb on - strand, within PfGW456L13_704at 803.790 kb on - strand, within PfGW456L13_704at 803.790 kb on - strand, within PfGW456L13_704at 803.790 kb on - strand, within PfGW456L13_704at 803.841 kb on - strand, within PfGW456L13_704at 803.911 kb on + strandat 803.912 kb on - strandat 803.912 kb on - strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.952 kb on + strandat 803.953 kb on - strandat 803.953 kb on - strandat 803.953 kb on - strandat 803.953 kb on - strandat 803.953 kb on - strandat 803.953 kb on - strandat 803.953 kb on - strandat 803.954 kb on + strandat 803.964 kb on + strandat 803.964 kb on + strandat 803.964 kb on + strandat 803.965 kb on - strandat 803.965 kb on - strandat 803.965 kb on - strandat 803.978 kb on + strandat 803.978 kb on + strandat 803.978 kb on + strandat 804.018 kb on + strandat 804.019 kb on - strandat 804.019 kb on - strandat 804.019 kb on - strandat 804.019 kb on - strandat 804.019 kb on - strandat 804.048 kb on + strandat 804.052 kb on + strandat 804.052 kb on + strandat 804.053 kb on - strandat 804.088 kb on + strandat 804.089 kb on - strandat 804.099 kb on - strandat 804.099 kb on - strandat 804.099 kb on - strandat 804.112 kb on + strandat 804.246 kb on + strand, within PfGW456L13_705at 804.624 kb on - strandat 804.637 kb on + strandat 804.637 kb on + strandat 804.637 kb on + strandat 804.674 kb on + strandat 804.674 kb on + strandat 804.674 kb on + strandat 804.675 kb on - strandat 804.756 kb on + strandat 804.756 kb on + strandat 804.898 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.976 kb on + strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 804.977 kb on - strand, within PfGW456L13_706at 805.069 kb on + strand, within PfGW456L13_706at 805.070 kb on - strand, within PfGW456L13_706at 805.070 kb on - strand, within PfGW456L13_706at 805.160 kb on - strand, within PfGW456L13_706at 805.160 kb on - strand, within PfGW456L13_706at 805.160 kb on - strand, within PfGW456L13_706at 805.180 kb on + strand, within PfGW456L13_706at 805.180 kb on + strand, within PfGW456L13_706at 805.260 kb on + strand, within PfGW456L13_706at 805.260 kb on + strand, within PfGW456L13_706at 805.309 kb on + strand, within PfGW456L13_706at 805.310 kb on - strand, within PfGW456L13_706at 805.310 kb on - strand, within PfGW456L13_706at 805.310 kb on - strand, within PfGW456L13_706at 805.471 kb on + strand, within PfGW456L13_706at 805.471 kb on + strand, within PfGW456L13_706at 805.489 kb on - strand, within PfGW456L13_706at 805.576 kb on + strandat 805.577 kb on - strandat 805.625 kb on + strandat 805.626 kb on - strandat 805.626 kb on - strandat 805.626 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM
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803,252 + PfGW456L13_704 0.49 +0.4
803,252 + PfGW456L13_704 0.49 -1.4
803,252 + PfGW456L13_704 0.49 -0.9
803,252 + PfGW456L13_704 0.49 -0.5
803,252 + PfGW456L13_704 0.49 +0.9
803,252 + PfGW456L13_704 0.49 +1.8
803,252 + PfGW456L13_704 0.49 -0.5
803,252 + PfGW456L13_704 0.49 +1.2
803,252 + PfGW456L13_704 0.49 +0.8
803,252 + PfGW456L13_704 0.49 +0.1
803,252 + PfGW456L13_704 0.49 -0.4
803,252 + PfGW456L13_704 0.49 -1.8
803,253 - PfGW456L13_704 0.49 -3.2
803,253 - PfGW456L13_704 0.49 -0.8
803,253 - PfGW456L13_704 0.49 +1.1
803,253 - PfGW456L13_704 0.49 +0.6
803,253 - PfGW456L13_704 0.49 +0.3
803,253 - PfGW456L13_704 0.49 -0.1
803,253 - PfGW456L13_704 0.49 +0.6
803,253 - PfGW456L13_704 0.49 +0.7
803,253 - PfGW456L13_704 0.49 +0.1
803,253 - PfGW456L13_704 0.49 +0.1
803,253 - PfGW456L13_704 0.49 +0.4
803,253 - PfGW456L13_704 0.49 +0.5
803,253 - PfGW456L13_704 0.49 +0.6
803,253 - PfGW456L13_704 0.49 -1.4
803,253 - PfGW456L13_704 0.49 -1.2
803,253 - PfGW456L13_704 0.49 +0.4
803,253 - PfGW456L13_704 0.49 +0.8
803,253 - PfGW456L13_704 0.49 -1.9
803,358 + PfGW456L13_704 0.56 -0.6
803,359 - PfGW456L13_704 0.56 +0.8
803,447 + PfGW456L13_704 0.63 -0.6
803,447 + PfGW456L13_704 0.63 -0.6
803,447 + PfGW456L13_704 0.63 -0.2
803,447 + PfGW456L13_704 0.63 -0.3
803,448 - PfGW456L13_704 0.63 -0.2
803,448 - PfGW456L13_704 0.63 +0.5
803,448 - PfGW456L13_704 0.63 -1.5
803,448 - PfGW456L13_704 0.63 +0.4
803,456 + PfGW456L13_704 0.63 -0.2
803,456 + PfGW456L13_704 0.63 +0.3
803,457 - PfGW456L13_704 0.63 -0.4
803,457 - PfGW456L13_704 0.63 +0.3
803,457 - PfGW456L13_704 0.63 -1.3
803,457 - PfGW456L13_704 0.63 +0.8
803,465 - PfGW456L13_704 0.64 +0.4
803,595 + PfGW456L13_704 0.73 +0.1
803,595 + PfGW456L13_704 0.73 -0.2
803,595 + PfGW456L13_704 0.73 -1.4
803,595 + PfGW456L13_704 0.73 -0.3
803,596 - PfGW456L13_704 0.73 +0.3
803,596 - PfGW456L13_704 0.73 +0.5
803,682 - PfGW456L13_704 0.79 +1.1
803,716 + PfGW456L13_704 0.81 -0.0
803,789 + PfGW456L13_704 0.86 -0.5
803,789 + PfGW456L13_704 0.86 -0.5
803,789 + +0.3
803,789 + PfGW456L13_704 0.86 +1.8
803,789 + PfGW456L13_704 0.86 -0.1
803,790 - PfGW456L13_704 0.86 -0.2
803,790 - PfGW456L13_704 0.86 -1.2
803,790 - PfGW456L13_704 0.86 +1.1
803,790 - PfGW456L13_704 0.86 +1.3
803,841 - PfGW456L13_704 0.90 -0.1
803,911 + +1.5
803,912 - -0.6
803,912 - -2.1
803,952 + -0.9
803,952 + -1.2
803,952 + +0.2
803,952 + +0.7
803,952 + +1.8
803,952 + +0.0
803,952 + -1.8
803,952 + -0.5
803,952 + -0.0
803,953 - -2.2
803,953 - +1.5
803,953 - -0.0
803,953 - -0.1
803,953 - -0.3
803,953 - +1.2
803,953 - +0.3
803,954 + -0.5
803,964 + +0.5
803,964 + -1.1
803,964 + +0.7
803,965 - +1.1
803,965 - -1.1
803,965 - +1.1
803,978 + +0.9
803,978 + -0.1
803,978 + -0.4
804,018 + -0.4
804,019 - -0.1
804,019 - -1.8
804,019 - -0.1
804,019 - +0.1
804,019 - +2.4
804,048 + +1.3
804,052 + +0.3
804,052 + +0.2
804,053 - -0.7
804,088 + -0.9
804,089 - +1.1
804,099 - +1.3
804,099 - +0.7
804,099 - -0.2
804,112 + +0.2
804,246 + PfGW456L13_705 0.25 -2.4
804,624 - -0.7
804,637 + -1.3
804,637 + -0.4
804,637 + +0.2
804,674 + +0.4
804,674 + +0.8
804,674 + +0.2
804,675 - -1.3
804,756 + +0.3
804,756 + -0.6
804,898 + PfGW456L13_706 0.19 -1.3
804,976 + PfGW456L13_706 0.28 +0.9
804,976 + PfGW456L13_706 0.28 -0.4
804,976 + PfGW456L13_706 0.28 +0.4
804,976 + PfGW456L13_706 0.28 -0.4
804,976 + PfGW456L13_706 0.28 +0.0
804,976 + PfGW456L13_706 0.28 -0.2
804,976 + PfGW456L13_706 0.28 +0.6
804,976 + PfGW456L13_706 0.28 -0.3
804,977 - PfGW456L13_706 0.28 +0.8
804,977 - PfGW456L13_706 0.28 +0.2
804,977 - PfGW456L13_706 0.28 +1.1
804,977 - PfGW456L13_706 0.28 -0.6
804,977 - PfGW456L13_706 0.28 +1.0
804,977 - PfGW456L13_706 0.28 -0.1
804,977 - PfGW456L13_706 0.28 +0.8
804,977 - PfGW456L13_706 0.28 +0.1
805,069 + PfGW456L13_706 0.38 +0.2
805,070 - PfGW456L13_706 0.38 -0.5
805,070 - PfGW456L13_706 0.38 -0.2
805,160 - PfGW456L13_706 0.49 -0.1
805,160 - PfGW456L13_706 0.49 -1.2
805,160 - PfGW456L13_706 0.49 -0.5
805,180 + PfGW456L13_706 0.51 +0.1
805,180 + PfGW456L13_706 0.51 +1.3
805,260 + PfGW456L13_706 0.60 -0.6
805,260 + PfGW456L13_706 0.60 +0.9
805,309 + PfGW456L13_706 0.65 +1.2
805,310 - PfGW456L13_706 0.65 +0.1
805,310 - PfGW456L13_706 0.65 +0.1
805,310 - PfGW456L13_706 0.65 -0.9
805,471 + PfGW456L13_706 0.84 -2.5
805,471 + PfGW456L13_706 0.84 -1.1
805,489 - PfGW456L13_706 0.86 -0.1
805,576 + -0.2
805,577 - +1.2
805,625 + -1.2
805,626 - -1.3
805,626 - +0.6
805,626 - -1.2

Or see this region's nucleotide sequence