Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_58 and PfGW456L13_59 are separated by 127 nucleotides PfGW456L13_59 and PfGW456L13_60 are separated by 65 nucleotides PfGW456L13_60 and PfGW456L13_61 are separated by 187 nucleotides
PfGW456L13_58 - Phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 68,061 to 69,356
_58
PfGW456L13_59 - Sensor histidine kinase/response regulator, at 69,484 to 72,234
_59
PfGW456L13_60 - membrane protein, MarC family, at 72,300 to 72,896
_60
PfGW456L13_61 - hypothetical protein, at 73,084 to 73,407
_61
Position (kb)
69
70
71
72
73 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 69.355 kb on - strand at 69.355 kb on - strand at 69.355 kb on - strand at 69.355 kb on - strand at 69.359 kb on + strand at 69.359 kb on + strand at 69.359 kb on + strand at 69.360 kb on - strand at 69.389 kb on + strand at 69.390 kb on - strand at 69.400 kb on + strand at 69.421 kb on + strand at 69.421 kb on + strand at 69.422 kb on - strand at 69.422 kb on - strand at 69.422 kb on - strand at 69.423 kb on + strand at 69.423 kb on + strand at 69.423 kb on + strand at 69.424 kb on - strand at 69.424 kb on - strand at 69.424 kb on - strand at 69.424 kb on - strand at 69.439 kb on + strand at 69.439 kb on + strand at 69.440 kb on - strand at 69.479 kb on + strand at 69.479 kb on + strand at 69.480 kb on - strand at 69.519 kb on - strand at 69.607 kb on + strand at 69.607 kb on + strand at 69.608 kb on - strand at 69.754 kb on + strand at 69.754 kb on + strand at 69.754 kb on + strand at 69.755 kb on - strand at 69.881 kb on + strand, within PfGW456L13_59 at 69.882 kb on - strand, within PfGW456L13_59 at 69.882 kb on - strand, within PfGW456L13_59 at 69.882 kb on - strand, within PfGW456L13_59 at 69.882 kb on - strand, within PfGW456L13_59 at 69.919 kb on + strand, within PfGW456L13_59 at 69.919 kb on + strand, within PfGW456L13_59 at 69.920 kb on - strand, within PfGW456L13_59 at 69.920 kb on - strand, within PfGW456L13_59 at 69.920 kb on - strand, within PfGW456L13_59 at 69.920 kb on - strand, within PfGW456L13_59 at 69.976 kb on + strand, within PfGW456L13_59 at 69.976 kb on + strand, within PfGW456L13_59 at 69.977 kb on - strand, within PfGW456L13_59 at 70.030 kb on + strand at 70.179 kb on - strand, within PfGW456L13_59 at 70.179 kb on - strand, within PfGW456L13_59 at 70.179 kb on - strand, within PfGW456L13_59 at 70.311 kb on + strand, within PfGW456L13_59 at 70.336 kb on + strand, within PfGW456L13_59 at 70.337 kb on - strand, within PfGW456L13_59 at 70.346 kb on + strand, within PfGW456L13_59 at 70.759 kb on + strand, within PfGW456L13_59 at 70.764 kb on - strand, within PfGW456L13_59 at 71.522 kb on - strand, within PfGW456L13_59 at 71.531 kb on + strand, within PfGW456L13_59 at 71.531 kb on + strand, within PfGW456L13_59 at 71.531 kb on + strand, within PfGW456L13_59 at 71.531 kb on + strand, within PfGW456L13_59 at 71.531 kb on + strand, within PfGW456L13_59 at 71.532 kb on - strand, within PfGW456L13_59 at 71.532 kb on - strand, within PfGW456L13_59 at 71.532 kb on - strand, within PfGW456L13_59 at 72.085 kb on - strand at 72.100 kb on - strand at 72.259 kb on + strand at 72.259 kb on + strand at 72.259 kb on + strand at 72.260 kb on - strand at 72.325 kb on - strand at 72.346 kb on - strand at 72.393 kb on + strand, within PfGW456L13_60 at 72.430 kb on + strand, within PfGW456L13_60 at 72.465 kb on + strand, within PfGW456L13_60 at 72.465 kb on + strand, within PfGW456L13_60 at 72.465 kb on + strand, within PfGW456L13_60 at 72.465 kb on + strand, within PfGW456L13_60 at 72.466 kb on - strand, within PfGW456L13_60 at 72.466 kb on - strand, within PfGW456L13_60 at 72.466 kb on - strand, within PfGW456L13_60 at 72.504 kb on - strand, within PfGW456L13_60 at 72.743 kb on + strand, within PfGW456L13_60 at 72.743 kb on + strand, within PfGW456L13_60 at 72.744 kb on - strand, within PfGW456L13_60 at 73.028 kb on - strand at 73.061 kb on + strand at 73.061 kb on + strand at 73.061 kb on + strand at 73.061 kb on + strand at 73.062 kb on - strand at 73.062 kb on - strand at 73.062 kb on - strand at 73.062 kb on - strand at 73.156 kb on + strand, within PfGW456L13_61 at 73.157 kb on - strand, within PfGW456L13_61
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 69,355 - +1.2 69,355 - -0.1 69,355 - +0.6 69,355 - -0.1 69,359 + -1.6 69,359 + -0.5 69,359 + -1.1 69,360 - +0.9 69,389 + +2.5 69,390 - +0.3 69,400 + +1.4 69,421 + +1.8 69,421 + -0.1 69,422 - +0.3 69,422 - +0.2 69,422 - -0.1 69,423 + +1.5 69,423 + +1.4 69,423 + +1.1 69,424 - -0.7 69,424 - -0.5 69,424 - +0.8 69,424 - +0.0 69,439 + -1.1 69,439 + +2.5 69,440 - -0.1 69,479 + -2.1 69,479 + -0.9 69,480 - -2.1 69,519 - -2.0 69,607 + -0.5 69,607 + +1.5 69,608 - +0.2 69,754 + -1.4 69,754 + -1.7 69,754 + -2.4 69,755 - +0.1 69,881 + PfGW456L13_59 0.14 +0.5 69,882 - PfGW456L13_59 0.14 +0.1 69,882 - PfGW456L13_59 0.14 +0.1 69,882 - PfGW456L13_59 0.14 +0.6 69,882 - PfGW456L13_59 0.14 -1.0 69,919 + PfGW456L13_59 0.16 -0.8 69,919 + PfGW456L13_59 0.16 -0.4 69,920 - PfGW456L13_59 0.16 -0.4 69,920 - PfGW456L13_59 0.16 -0.9 69,920 - PfGW456L13_59 0.16 -0.1 69,920 - PfGW456L13_59 0.16 -2.0 69,976 + PfGW456L13_59 0.18 +0.1 69,976 + PfGW456L13_59 0.18 -2.9 69,977 - PfGW456L13_59 0.18 +2.0 70,030 + -0.9 70,179 - PfGW456L13_59 0.25 -1.2 70,179 - PfGW456L13_59 0.25 -2.4 70,179 - PfGW456L13_59 0.25 -1.1 70,311 + PfGW456L13_59 0.30 -0.1 70,336 + PfGW456L13_59 0.31 -2.1 70,337 - PfGW456L13_59 0.31 +0.5 70,346 + PfGW456L13_59 0.31 -1.7 70,759 + PfGW456L13_59 0.46 -1.4 70,764 - PfGW456L13_59 0.47 -1.5 71,522 - PfGW456L13_59 0.74 -0.4 71,531 + PfGW456L13_59 0.74 -1.1 71,531 + PfGW456L13_59 0.74 +0.5 71,531 + PfGW456L13_59 0.74 -1.7 71,531 + PfGW456L13_59 0.74 -1.5 71,531 + PfGW456L13_59 0.74 -0.5 71,532 - PfGW456L13_59 0.74 +0.9 71,532 - PfGW456L13_59 0.74 -1.4 71,532 - PfGW456L13_59 0.74 -0.9 72,085 - -1.0 72,100 - +1.1 72,259 + +1.1 72,259 + +1.1 72,259 + -0.8 72,260 - +1.3 72,325 - +0.3 72,346 - -2.0 72,393 + PfGW456L13_60 0.16 -1.6 72,430 + PfGW456L13_60 0.22 +0.6 72,465 + PfGW456L13_60 0.28 -0.5 72,465 + PfGW456L13_60 0.28 -0.2 72,465 + PfGW456L13_60 0.28 +0.2 72,465 + PfGW456L13_60 0.28 -0.5 72,466 - PfGW456L13_60 0.28 +0.3 72,466 - PfGW456L13_60 0.28 -0.5 72,466 - PfGW456L13_60 0.28 -1.0 72,504 - PfGW456L13_60 0.34 -0.1 72,743 + PfGW456L13_60 0.74 -1.9 72,743 + PfGW456L13_60 0.74 +2.0 72,744 - PfGW456L13_60 0.74 -0.5 73,028 - +2.0 73,061 + +0.9 73,061 + +0.2 73,061 + -0.9 73,061 + +0.4 73,062 - -1.6 73,062 - +0.0 73,062 - -0.8 73,062 - +0.3 73,156 + PfGW456L13_61 0.22 +0.5 73,157 - PfGW456L13_61 0.23 -0.2
Or see this region's nucleotide sequence