Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5088 and PfGW456L13_5089 are separated by 27 nucleotides PfGW456L13_5089 and PfGW456L13_5090 are separated by 59 nucleotides PfGW456L13_5090 and PfGW456L13_5242 are separated by 141 nucleotides PfGW456L13_5242 and PfGW456L13_5243 are separated by 100 nucleotides
PfGW456L13_5088 - Translation initiation factor 2, at 5,675,317 to 5,677,842
_5088
PfGW456L13_5089 - Transcription termination protein NusA, at 5,677,870 to 5,679,351
_5089
PfGW456L13_5090 - FIG000325: clustered with transcription termination protein NusA, at 5,679,411 to 5,679,869
_5090
PfGW456L13_5242 - tRNA-Met-CAT, at 5,680,011 to 5,680,084
_5242
PfGW456L13_5243 - tRNA-Leu-GAG, at 5,680,185 to 5,680,267
_5243
Position (kb)
5677
5678
5679
5680 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5677.872 kb on - strand at 5677.957 kb on - strand at 5677.957 kb on - strand at 5678.086 kb on - strand, within PfGW456L13_5089 at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.890 kb on - strand at 5679.901 kb on - strand at 5679.901 kb on - strand at 5679.990 kb on - strand at 5680.004 kb on - strand at 5680.048 kb on - strand, within PfGW456L13_5242 at 5680.106 kb on - strand at 5680.271 kb on - strand at 5680.274 kb on - strand at 5680.274 kb on - strand at 5680.292 kb on - strand at 5680.292 kb on - strand at 5680.292 kb on - strand at 5680.292 kb on - strand at 5680.292 kb on - strand at 5680.292 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 5,677,872 - +0.2 5,677,957 - +0.1 5,677,957 - +0.8 5,678,086 - PfGW456L13_5089 0.15 -2.0 5,679,890 - -2.2 5,679,890 - +0.6 5,679,890 - +1.0 5,679,890 - +0.7 5,679,890 - +2.0 5,679,890 - +1.1 5,679,890 - +1.4 5,679,890 - -0.2 5,679,890 - -0.1 5,679,890 - +1.8 5,679,890 - -0.5 5,679,890 - -1.2 5,679,890 - -0.2 5,679,890 - -1.0 5,679,890 - -0.3 5,679,890 - -0.4 5,679,890 - +0.6 5,679,890 - +1.1 5,679,890 - -1.0 5,679,890 - -0.4 5,679,890 - +0.7 5,679,890 - -1.0 5,679,890 - -0.2 5,679,890 - -0.8 5,679,890 - +2.2 5,679,890 - +0.9 5,679,890 - -1.4 5,679,890 - -1.8 5,679,890 - -0.2 5,679,890 - +1.5 5,679,890 - +0.7 5,679,890 - +1.4 5,679,890 - +0.5 5,679,890 - -2.4 5,679,890 - +0.6 5,679,901 - -0.6 5,679,901 - +0.0 5,679,990 - -0.6 5,680,004 - -2.0 5,680,048 - PfGW456L13_5242 0.50 +0.6 5,680,106 - +0.7 5,680,271 - -0.2 5,680,274 - -0.6 5,680,274 - -0.8 5,680,292 - +0.4 5,680,292 - -0.2 5,680,292 - -0.6 5,680,292 - -0.8 5,680,292 - +0.9 5,680,292 - +0.8
Or see this region's nucleotide sequence