Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4669 and PfGW456L13_4670 are separated by 118 nucleotides PfGW456L13_4670 and PfGW456L13_4671 are separated by 173 nucleotides PfGW456L13_4671 and PfGW456L13_4672 are separated by 209 nucleotides
PfGW456L13_4669 - C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS, at 5,207,821 to 5,208,321
_4669
PfGW456L13_4670 - Holin, at 5,208,440 to 5,208,781
_4670
PfGW456L13_4671 - Transcriptional regulator, Cro/CI family, at 5,208,955 to 5,209,689
_4671
PfGW456L13_4672 - DNA mismatch repair protein MutS, at 5,209,899 to 5,212,478
_4672
Position (kb) 5208
5209
5210 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5208.038 kb on + strand, within PfGW456L13_4669 at 5208.038 kb on + strand, within PfGW456L13_4669 at 5208.038 kb on + strand at 5208.039 kb on - strand, within PfGW456L13_4669 at 5208.039 kb on - strand, within PfGW456L13_4669 at 5208.039 kb on - strand, within PfGW456L13_4669 at 5208.045 kb on + strand, within PfGW456L13_4669 at 5208.046 kb on - strand, within PfGW456L13_4669 at 5208.161 kb on + strand, within PfGW456L13_4669 at 5208.161 kb on + strand, within PfGW456L13_4669 at 5208.161 kb on + strand, within PfGW456L13_4669 at 5208.162 kb on - strand, within PfGW456L13_4669 at 5208.171 kb on - strand, within PfGW456L13_4669 at 5208.171 kb on - strand, within PfGW456L13_4669 at 5208.171 kb on - strand, within PfGW456L13_4669 at 5208.171 kb on - strand, within PfGW456L13_4669 at 5208.357 kb on + strand at 5208.357 kb on + strand at 5208.357 kb on + strand at 5208.357 kb on + strand at 5208.357 kb on + strand at 5208.357 kb on + strand at 5208.358 kb on - strand at 5208.402 kb on + strand at 5208.402 kb on + strand at 5208.402 kb on + strand at 5208.402 kb on + strand at 5208.466 kb on + strand at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.504 kb on + strand at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.504 kb on + strand, within PfGW456L13_4670 at 5208.505 kb on - strand, within PfGW456L13_4670 at 5208.505 kb on - strand, within PfGW456L13_4670 at 5208.505 kb on - strand, within PfGW456L13_4670 at 5208.765 kb on + strand at 5208.798 kb on + strand at 5208.798 kb on + strand at 5208.799 kb on - strand at 5208.822 kb on + strand at 5208.823 kb on - strand at 5208.823 kb on - strand at 5208.881 kb on - strand at 5208.887 kb on - strand at 5208.965 kb on + strand at 5208.965 kb on + strand at 5208.965 kb on + strand at 5208.965 kb on + strand at 5208.965 kb on + strand at 5208.966 kb on - strand at 5208.966 kb on - strand at 5208.966 kb on - strand at 5208.966 kb on - strand at 5208.966 kb on - strand at 5208.966 kb on - strand at 5208.969 kb on + strand at 5208.969 kb on + strand at 5208.970 kb on - strand at 5208.970 kb on - strand at 5208.970 kb on - strand at 5208.970 kb on - strand at 5208.970 kb on - strand at 5208.970 kb on - strand at 5208.997 kb on + strand at 5209.031 kb on + strand, within PfGW456L13_4671 at 5209.031 kb on + strand, within PfGW456L13_4671 at 5209.031 kb on + strand, within PfGW456L13_4671 at 5209.032 kb on - strand, within PfGW456L13_4671 at 5209.032 kb on - strand, within PfGW456L13_4671 at 5209.032 kb on - strand, within PfGW456L13_4671 at 5209.032 kb on - strand, within PfGW456L13_4671 at 5209.032 kb on - strand, within PfGW456L13_4671 at 5209.032 kb on - strand, within PfGW456L13_4671 at 5209.136 kb on + strand, within PfGW456L13_4671 at 5209.208 kb on - strand, within PfGW456L13_4671 at 5209.208 kb on - strand, within PfGW456L13_4671 at 5209.306 kb on - strand, within PfGW456L13_4671 at 5209.306 kb on - strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.423 kb on + strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.424 kb on - strand, within PfGW456L13_4671 at 5209.425 kb on + strand, within PfGW456L13_4671 at 5209.425 kb on + strand, within PfGW456L13_4671 at 5209.425 kb on + strand, within PfGW456L13_4671 at 5209.426 kb on - strand, within PfGW456L13_4671 at 5209.426 kb on - strand, within PfGW456L13_4671 at 5209.426 kb on - strand, within PfGW456L13_4671 at 5209.426 kb on - strand, within PfGW456L13_4671 at 5209.520 kb on + strand, within PfGW456L13_4671 at 5209.660 kb on + strand at 5209.661 kb on - strand at 5209.663 kb on + strand at 5209.663 kb on + strand at 5209.663 kb on + strand at 5209.663 kb on + strand at 5209.663 kb on + strand at 5209.664 kb on - strand at 5209.664 kb on - strand at 5209.664 kb on - strand at 5209.664 kb on - strand at 5209.668 kb on + strand at 5209.668 kb on + strand at 5209.669 kb on - strand at 5209.672 kb on + strand at 5209.672 kb on + strand at 5209.672 kb on + strand at 5209.672 kb on + strand at 5209.673 kb on - strand at 5209.673 kb on - strand at 5209.690 kb on - strand at 5209.749 kb on + strand at 5209.749 kb on + strand at 5209.750 kb on - strand at 5209.768 kb on + strand at 5209.768 kb on + strand at 5209.818 kb on + strand at 5209.904 kb on + strand at 5209.905 kb on - strand at 5210.010 kb on + strand at 5210.011 kb on - strand at 5210.011 kb on - strand at 5210.022 kb on + strand at 5210.022 kb on + strand at 5210.022 kb on + strand at 5210.022 kb on + strand at 5210.023 kb on - strand at 5210.023 kb on - strand at 5210.118 kb on + strand at 5210.118 kb on + strand at 5210.137 kb on - strand at 5210.234 kb on - strand, within PfGW456L13_4672 at 5210.434 kb on + strand, within PfGW456L13_4672 at 5210.434 kb on + strand, within PfGW456L13_4672 at 5210.434 kb on + strand, within PfGW456L13_4672 at 5210.434 kb on + strand, within PfGW456L13_4672 at 5210.434 kb on + strand, within PfGW456L13_4672 at 5210.434 kb on + strand, within PfGW456L13_4672 at 5210.435 kb on - strand, within PfGW456L13_4672 at 5210.435 kb on - strand, within PfGW456L13_4672 at 5210.435 kb on - strand, within PfGW456L13_4672
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 5,208,038 + PfGW456L13_4669 0.43 -0.1 5,208,038 + PfGW456L13_4669 0.43 -0.6 5,208,038 + +1.2 5,208,039 - PfGW456L13_4669 0.44 +0.2 5,208,039 - PfGW456L13_4669 0.44 -0.6 5,208,039 - PfGW456L13_4669 0.44 +0.3 5,208,045 + PfGW456L13_4669 0.45 -0.8 5,208,046 - PfGW456L13_4669 0.45 +0.3 5,208,161 + PfGW456L13_4669 0.68 +1.4 5,208,161 + PfGW456L13_4669 0.68 +1.0 5,208,161 + PfGW456L13_4669 0.68 +0.9 5,208,162 - PfGW456L13_4669 0.68 +0.1 5,208,171 - PfGW456L13_4669 0.70 +0.5 5,208,171 - PfGW456L13_4669 0.70 +0.3 5,208,171 - PfGW456L13_4669 0.70 -1.0 5,208,171 - PfGW456L13_4669 0.70 +1.2 5,208,357 + -1.1 5,208,357 + +0.6 5,208,357 + -1.9 5,208,357 + -0.2 5,208,357 + -1.7 5,208,357 + -0.0 5,208,358 - -0.7 5,208,402 + +0.1 5,208,402 + -0.3 5,208,402 + -0.2 5,208,402 + +0.4 5,208,466 + +0.5 5,208,504 + PfGW456L13_4670 0.19 +0.5 5,208,504 + -1.1 5,208,504 + PfGW456L13_4670 0.19 -0.1 5,208,504 + PfGW456L13_4670 0.19 +1.0 5,208,504 + PfGW456L13_4670 0.19 +1.2 5,208,504 + PfGW456L13_4670 0.19 -1.3 5,208,504 + PfGW456L13_4670 0.19 +0.2 5,208,504 + PfGW456L13_4670 0.19 +0.3 5,208,504 + PfGW456L13_4670 0.19 +1.0 5,208,505 - PfGW456L13_4670 0.19 +0.2 5,208,505 - PfGW456L13_4670 0.19 +0.1 5,208,505 - PfGW456L13_4670 0.19 +0.2 5,208,765 + +0.3 5,208,798 + +0.4 5,208,798 + -0.9 5,208,799 - +0.0 5,208,822 + +0.2 5,208,823 - -2.6 5,208,823 - -1.1 5,208,881 - +0.7 5,208,887 - -0.8 5,208,965 + -0.6 5,208,965 + -0.2 5,208,965 + +1.5 5,208,965 + +0.3 5,208,965 + +0.9 5,208,966 - -1.9 5,208,966 - -4.9 5,208,966 - -2.8 5,208,966 - -3.4 5,208,966 - -4.2 5,208,966 - -3.4 5,208,969 + -0.3 5,208,969 + -0.3 5,208,970 - -2.2 5,208,970 - -2.3 5,208,970 - -2.8 5,208,970 - -3.5 5,208,970 - -3.6 5,208,970 - -1.8 5,208,997 + -0.0 5,209,031 + PfGW456L13_4671 0.10 -0.1 5,209,031 + PfGW456L13_4671 0.10 +0.1 5,209,031 + PfGW456L13_4671 0.10 -1.1 5,209,032 - PfGW456L13_4671 0.10 -0.9 5,209,032 - PfGW456L13_4671 0.10 -2.1 5,209,032 - PfGW456L13_4671 0.10 -3.2 5,209,032 - PfGW456L13_4671 0.10 +0.0 5,209,032 - PfGW456L13_4671 0.10 -2.5 5,209,032 - PfGW456L13_4671 0.10 -3.6 5,209,136 + PfGW456L13_4671 0.25 +2.5 5,209,208 - PfGW456L13_4671 0.34 -3.8 5,209,208 - PfGW456L13_4671 0.34 -1.6 5,209,306 - PfGW456L13_4671 0.48 -3.7 5,209,306 - PfGW456L13_4671 0.48 -2.0 5,209,423 + PfGW456L13_4671 0.64 -2.2 5,209,423 + PfGW456L13_4671 0.64 -2.8 5,209,423 + PfGW456L13_4671 0.64 -1.7 5,209,423 + PfGW456L13_4671 0.64 -1.7 5,209,423 + PfGW456L13_4671 0.64 -4.5 5,209,423 + PfGW456L13_4671 0.64 -4.0 5,209,423 + PfGW456L13_4671 0.64 -0.9 5,209,423 + PfGW456L13_4671 0.64 -1.3 5,209,423 + PfGW456L13_4671 0.64 -1.7 5,209,423 + PfGW456L13_4671 0.64 -1.6 5,209,423 + PfGW456L13_4671 0.64 -2.2 5,209,423 + PfGW456L13_4671 0.64 -1.6 5,209,423 + PfGW456L13_4671 0.64 -3.1 5,209,423 + PfGW456L13_4671 0.64 -1.0 5,209,423 + PfGW456L13_4671 0.64 -1.9 5,209,423 + PfGW456L13_4671 0.64 -1.0 5,209,423 + PfGW456L13_4671 0.64 -2.6 5,209,423 + PfGW456L13_4671 0.64 -2.5 5,209,423 + PfGW456L13_4671 0.64 -2.7 5,209,423 + PfGW456L13_4671 0.64 -2.0 5,209,423 + PfGW456L13_4671 0.64 -1.8 5,209,423 + PfGW456L13_4671 0.64 -2.4 5,209,423 + PfGW456L13_4671 0.64 -2.1 5,209,423 + PfGW456L13_4671 0.64 -1.8 5,209,424 - PfGW456L13_4671 0.64 -1.1 5,209,424 - PfGW456L13_4671 0.64 -2.7 5,209,424 - PfGW456L13_4671 0.64 -3.0 5,209,424 - PfGW456L13_4671 0.64 -1.9 5,209,424 - PfGW456L13_4671 0.64 -0.9 5,209,424 - PfGW456L13_4671 0.64 -2.1 5,209,424 - PfGW456L13_4671 0.64 -4.1 5,209,424 - PfGW456L13_4671 0.64 -2.1 5,209,424 - PfGW456L13_4671 0.64 -3.7 5,209,424 - PfGW456L13_4671 0.64 -1.3 5,209,424 - PfGW456L13_4671 0.64 -2.8 5,209,424 - PfGW456L13_4671 0.64 -3.8 5,209,424 - PfGW456L13_4671 0.64 -2.6 5,209,424 - PfGW456L13_4671 0.64 +0.1 5,209,424 - PfGW456L13_4671 0.64 -3.0 5,209,424 - PfGW456L13_4671 0.64 -5.3 5,209,424 - PfGW456L13_4671 0.64 -2.9 5,209,424 - PfGW456L13_4671 0.64 -2.3 5,209,424 - PfGW456L13_4671 0.64 -1.8 5,209,424 - PfGW456L13_4671 0.64 -2.8 5,209,424 - PfGW456L13_4671 0.64 -2.8 5,209,424 - PfGW456L13_4671 0.64 -2.8 5,209,424 - PfGW456L13_4671 0.64 -1.3 5,209,424 - PfGW456L13_4671 0.64 -3.5 5,209,424 - PfGW456L13_4671 0.64 -4.2 5,209,425 + PfGW456L13_4671 0.64 -2.8 5,209,425 + PfGW456L13_4671 0.64 -4.0 5,209,425 + PfGW456L13_4671 0.64 -1.6 5,209,426 - PfGW456L13_4671 0.64 -2.1 5,209,426 - PfGW456L13_4671 0.64 -3.1 5,209,426 - PfGW456L13_4671 0.64 -3.2 5,209,426 - PfGW456L13_4671 0.64 -3.3 5,209,520 + PfGW456L13_4671 0.77 -0.8 5,209,660 + -2.2 5,209,661 - -4.4 5,209,663 + -2.1 5,209,663 + -1.3 5,209,663 + -2.1 5,209,663 + -2.5 5,209,663 + -1.6 5,209,664 - -2.2 5,209,664 - -1.6 5,209,664 - -1.8 5,209,664 - -2.8 5,209,668 + -1.8 5,209,668 + -2.7 5,209,669 - -1.8 5,209,672 + -2.3 5,209,672 + -2.7 5,209,672 + -3.5 5,209,672 + -2.7 5,209,673 - -1.8 5,209,673 - -3.4 5,209,690 - +0.4 5,209,749 + -0.8 5,209,749 + -0.7 5,209,750 - +0.5 5,209,768 + -1.9 5,209,768 + +1.7 5,209,818 + +1.1 5,209,904 + -1.7 5,209,905 - +0.9 5,210,010 + +0.4 5,210,011 - +0.3 5,210,011 - -0.7 5,210,022 + +0.5 5,210,022 + -0.2 5,210,022 + +0.5 5,210,022 + +0.3 5,210,023 - -0.5 5,210,023 - +0.9 5,210,118 + -1.4 5,210,118 + -0.6 5,210,137 - -0.6 5,210,234 - PfGW456L13_4672 0.13 +0.5 5,210,434 + PfGW456L13_4672 0.21 +0.1 5,210,434 + PfGW456L13_4672 0.21 +0.1 5,210,434 + PfGW456L13_4672 0.21 -2.7 5,210,434 + PfGW456L13_4672 0.21 -0.6 5,210,434 + PfGW456L13_4672 0.21 +0.1 5,210,434 + PfGW456L13_4672 0.21 -0.1 5,210,435 - PfGW456L13_4672 0.21 -0.7 5,210,435 - PfGW456L13_4672 0.21 +1.5 5,210,435 - PfGW456L13_4672 0.21 -0.3
Or see this region's nucleotide sequence