Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4617 and PfGW456L13_4618 are separated by 105 nucleotides PfGW456L13_4618 and PfGW456L13_4619 are separated by 165 nucleotides PfGW456L13_4619 and PfGW456L13_4620 are separated by 5 nucleotides
PfGW456L13_4617 - Na+/H+ antiporter NhaA type, at 5,154,402 to 5,155,589
_4617
PfGW456L13_4618 - Outer membrane lipoprotein, at 5,155,695 to 5,156,159
_4618
PfGW456L13_4619 - Ribosomal protein S3, at 5,156,325 to 5,156,561
_4619
PfGW456L13_4620 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 5,156,567 to 5,157,214
_4620
Position (kb)
5155
5156
5157 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 5155.600 kb on + strand at 5155.696 kb on + strand at 5156.071 kb on + strand, within PfGW456L13_4618 at 5156.071 kb on + strand, within PfGW456L13_4618 at 5156.071 kb on + strand, within PfGW456L13_4618 at 5156.072 kb on - strand, within PfGW456L13_4618 at 5156.072 kb on - strand, within PfGW456L13_4618 at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.153 kb on + strand at 5156.154 kb on - strand at 5156.154 kb on - strand at 5156.154 kb on - strand at 5156.154 kb on - strand at 5156.154 kb on - strand at 5156.154 kb on - strand at 5156.154 kb on - strand at 5156.154 kb on - strand at 5156.159 kb on + strand at 5156.159 kb on + strand at 5156.159 kb on + strand at 5156.159 kb on + strand at 5156.159 kb on + strand at 5156.159 kb on + strand at 5156.159 kb on + strand at 5156.160 kb on - strand at 5156.160 kb on - strand at 5156.160 kb on - strand at 5156.190 kb on + strand at 5156.191 kb on - strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.331 kb on + strand at 5156.332 kb on - strand at 5156.332 kb on - strand at 5156.332 kb on - strand at 5156.332 kb on - strand at 5156.332 kb on - strand at 5156.336 kb on + strand at 5156.337 kb on - strand at 5156.367 kb on + strand, within PfGW456L13_4619 at 5156.368 kb on - strand, within PfGW456L13_4619 at 5156.368 kb on - strand, within PfGW456L13_4619 at 5156.386 kb on - strand, within PfGW456L13_4619 at 5156.559 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 5,155,600 + +0.5 5,155,696 + +0.1 5,156,071 + PfGW456L13_4618 0.81 -1.5 5,156,071 + PfGW456L13_4618 0.81 -1.4 5,156,071 + PfGW456L13_4618 0.81 -3.9 5,156,072 - PfGW456L13_4618 0.81 -2.6 5,156,072 - PfGW456L13_4618 0.81 -3.0 5,156,153 + -2.4 5,156,153 + -1.5 5,156,153 + -1.6 5,156,153 + +0.4 5,156,153 + -1.5 5,156,153 + -1.7 5,156,153 + -0.9 5,156,153 + -1.4 5,156,153 + -0.8 5,156,153 + -1.9 5,156,153 + -2.6 5,156,154 - -0.5 5,156,154 - -2.2 5,156,154 - -0.3 5,156,154 - +0.2 5,156,154 - -1.0 5,156,154 - -0.0 5,156,154 - -1.9 5,156,154 - -2.0 5,156,159 + -1.1 5,156,159 + -0.3 5,156,159 + -0.2 5,156,159 + -0.8 5,156,159 + +0.4 5,156,159 + -2.1 5,156,159 + -0.8 5,156,160 - -2.0 5,156,160 - -1.5 5,156,160 - -0.7 5,156,190 + -2.5 5,156,191 - -0.8 5,156,331 + -0.2 5,156,331 + -0.8 5,156,331 + +0.7 5,156,331 + -1.6 5,156,331 + -0.8 5,156,331 + -1.9 5,156,331 + -0.8 5,156,331 + -0.9 5,156,331 + -0.7 5,156,332 - +1.3 5,156,332 - +0.5 5,156,332 - +1.3 5,156,332 - +0.4 5,156,332 - +0.5 5,156,336 + -0.0 5,156,337 - +1.5 5,156,367 + PfGW456L13_4619 0.18 -1.7 5,156,368 - PfGW456L13_4619 0.18 +1.9 5,156,368 - PfGW456L13_4619 0.18 -0.9 5,156,386 - PfGW456L13_4619 0.26 +0.4 5,156,559 + -0.4
Or see this region's nucleotide sequence