Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4232 and PfGW456L13_4233 are separated by 52 nucleotides PfGW456L13_4233 and PfGW456L13_4234 are separated by 173 nucleotides PfGW456L13_4234 and PfGW456L13_4235 are separated by 2 nucleotides
PfGW456L13_4232 - Permeases of the major facilitator superfamily, at 4,746,806 to 4,748,014
_4232
PfGW456L13_4233 - Transcriptional regulator, MarR family, at 4,748,067 to 4,748,471
_4233
PfGW456L13_4234 - Cobalamin synthase, at 4,748,645 to 4,749,376
_4234
PfGW456L13_4235 - Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73), at 4,749,379 to 4,749,954
_4235
Position (kb)
4748
4749 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4747.104 kb on + strand, within PfGW456L13_4232 at 4747.104 kb on + strand, within PfGW456L13_4232 at 4747.104 kb on + strand, within PfGW456L13_4232 at 4747.104 kb on + strand, within PfGW456L13_4232 at 4747.105 kb on - strand, within PfGW456L13_4232 at 4747.105 kb on - strand, within PfGW456L13_4232 at 4747.105 kb on - strand, within PfGW456L13_4232 at 4747.167 kb on + strand, within PfGW456L13_4232 at 4747.167 kb on + strand, within PfGW456L13_4232 at 4747.167 kb on + strand, within PfGW456L13_4232 at 4747.167 kb on + strand, within PfGW456L13_4232 at 4747.168 kb on - strand, within PfGW456L13_4232 at 4747.168 kb on - strand, within PfGW456L13_4232 at 4747.168 kb on - strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.224 kb on + strand, within PfGW456L13_4232 at 4747.225 kb on - strand, within PfGW456L13_4232 at 4747.225 kb on - strand, within PfGW456L13_4232 at 4747.225 kb on - strand, within PfGW456L13_4232 at 4747.225 kb on - strand, within PfGW456L13_4232 at 4747.306 kb on - strand, within PfGW456L13_4232 at 4747.669 kb on + strand, within PfGW456L13_4232 at 4747.670 kb on - strand, within PfGW456L13_4232 at 4747.997 kb on - strand at 4747.997 kb on - strand at 4747.997 kb on - strand at 4747.997 kb on - strand at 4748.018 kb on + strand at 4748.019 kb on - strand at 4748.019 kb on - strand at 4748.037 kb on + strand at 4748.094 kb on + strand at 4748.407 kb on + strand, within PfGW456L13_4233 at 4748.407 kb on + strand, within PfGW456L13_4233 at 4748.451 kb on + strand at 4748.451 kb on + strand at 4748.451 kb on + strand at 4748.452 kb on - strand at 4748.452 kb on - strand at 4748.480 kb on + strand at 4748.480 kb on + strand at 4748.481 kb on - strand at 4748.481 kb on - strand at 4748.482 kb on + strand at 4748.483 kb on - strand at 4748.485 kb on - strand at 4748.663 kb on + strand at 4748.664 kb on - strand at 4748.664 kb on - strand at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.907 kb on + strand, within PfGW456L13_4234 at 4748.908 kb on - strand, within PfGW456L13_4234 at 4748.915 kb on - strand, within PfGW456L13_4234 at 4749.016 kb on + strand, within PfGW456L13_4234 at 4749.017 kb on - strand, within PfGW456L13_4234 at 4749.260 kb on + strand, within PfGW456L13_4234 at 4749.276 kb on + strand, within PfGW456L13_4234 at 4749.276 kb on + strand, within PfGW456L13_4234 at 4749.277 kb on - strand, within PfGW456L13_4234
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 4,747,104 + PfGW456L13_4232 0.25 -0.3 4,747,104 + PfGW456L13_4232 0.25 +1.6 4,747,104 + PfGW456L13_4232 0.25 +0.3 4,747,104 + PfGW456L13_4232 0.25 -0.5 4,747,105 - PfGW456L13_4232 0.25 -0.2 4,747,105 - PfGW456L13_4232 0.25 +2.3 4,747,105 - PfGW456L13_4232 0.25 -2.1 4,747,167 + PfGW456L13_4232 0.30 -0.6 4,747,167 + PfGW456L13_4232 0.30 -2.3 4,747,167 + PfGW456L13_4232 0.30 -0.3 4,747,167 + PfGW456L13_4232 0.30 -3.0 4,747,168 - PfGW456L13_4232 0.30 +0.1 4,747,168 - PfGW456L13_4232 0.30 -0.7 4,747,168 - PfGW456L13_4232 0.30 +0.1 4,747,224 + PfGW456L13_4232 0.35 +0.6 4,747,224 + PfGW456L13_4232 0.35 +0.7 4,747,224 + PfGW456L13_4232 0.35 +2.5 4,747,224 + PfGW456L13_4232 0.35 +0.8 4,747,224 + PfGW456L13_4232 0.35 +0.7 4,747,224 + PfGW456L13_4232 0.35 -0.1 4,747,224 + PfGW456L13_4232 0.35 -0.3 4,747,224 + PfGW456L13_4232 0.35 -2.8 4,747,224 + PfGW456L13_4232 0.35 -0.8 4,747,224 + PfGW456L13_4232 0.35 -0.8 4,747,224 + PfGW456L13_4232 0.35 +0.3 4,747,224 + PfGW456L13_4232 0.35 +1.0 4,747,224 + PfGW456L13_4232 0.35 -1.4 4,747,225 - PfGW456L13_4232 0.35 -0.5 4,747,225 - PfGW456L13_4232 0.35 +0.6 4,747,225 - PfGW456L13_4232 0.35 -1.0 4,747,225 - PfGW456L13_4232 0.35 +0.6 4,747,306 - PfGW456L13_4232 0.41 -1.6 4,747,669 + PfGW456L13_4232 0.71 -1.7 4,747,670 - PfGW456L13_4232 0.71 -1.4 4,747,997 - +0.0 4,747,997 - +0.2 4,747,997 - -1.5 4,747,997 - -1.8 4,748,018 + +0.3 4,748,019 - +0.5 4,748,019 - -1.7 4,748,037 + +0.5 4,748,094 + +0.7 4,748,407 + PfGW456L13_4233 0.84 +0.9 4,748,407 + PfGW456L13_4233 0.84 +0.9 4,748,451 + +0.1 4,748,451 + +0.3 4,748,451 + +1.4 4,748,452 - +1.3 4,748,452 - -0.9 4,748,480 + -2.2 4,748,480 + +1.0 4,748,481 - +0.1 4,748,481 - +0.5 4,748,482 + -1.4 4,748,483 - -0.1 4,748,485 - -3.1 4,748,663 + +1.6 4,748,664 - -0.4 4,748,664 - -1.9 4,748,907 + PfGW456L13_4234 0.36 -1.0 4,748,907 + PfGW456L13_4234 0.36 +2.1 4,748,907 + PfGW456L13_4234 0.36 +1.1 4,748,907 + PfGW456L13_4234 0.36 +1.2 4,748,907 + PfGW456L13_4234 0.36 -1.4 4,748,907 + PfGW456L13_4234 0.36 -2.1 4,748,907 + PfGW456L13_4234 0.36 +0.2 4,748,908 - PfGW456L13_4234 0.36 +0.8 4,748,915 - PfGW456L13_4234 0.37 -1.1 4,749,016 + PfGW456L13_4234 0.51 +1.1 4,749,017 - PfGW456L13_4234 0.51 +0.4 4,749,260 + PfGW456L13_4234 0.84 +1.3 4,749,276 + PfGW456L13_4234 0.86 +0.8 4,749,276 + PfGW456L13_4234 0.86 +1.2 4,749,277 - PfGW456L13_4234 0.86 +0.6
Or see this region's nucleotide sequence