Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4206 and PfGW456L13_4207 are separated by 369 nucleotides PfGW456L13_4207 and PfGW456L13_4208 are separated by 145 nucleotides
PfGW456L13_4206 - Quinone oxidoreductase (EC 1.6.5.5), at 4,717,024 to 4,717,722
_4206
PfGW456L13_4207 - Periplasmic protease, at 4,718,092 to 4,720,206
_4207
PfGW456L13_4208 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 4,720,352 to 4,722,142
_4208
Position (kb)
4718
4719
4720
4721 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4717.358 kb on + strand, within PfGW456L13_4206 at 4717.359 kb on - strand, within PfGW456L13_4206 at 4717.359 kb on - strand, within PfGW456L13_4206 at 4717.466 kb on + strand, within PfGW456L13_4206 at 4717.466 kb on + strand, within PfGW456L13_4206 at 4717.810 kb on + strand at 4717.810 kb on + strand at 4717.903 kb on + strand at 4717.903 kb on + strand at 4717.903 kb on + strand at 4717.903 kb on + strand at 4717.904 kb on - strand at 4717.904 kb on - strand at 4717.904 kb on - strand at 4717.904 kb on - strand at 4717.905 kb on + strand at 4717.905 kb on + strand at 4717.905 kb on + strand at 4717.906 kb on - strand at 4717.906 kb on - strand at 4717.952 kb on - strand at 4718.023 kb on + strand at 4718.023 kb on + strand at 4718.024 kb on - strand at 4718.088 kb on + strand at 4718.089 kb on - strand at 4718.089 kb on - strand at 4718.089 kb on - strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.091 kb on + strand at 4718.092 kb on - strand at 4718.092 kb on - strand at 4718.160 kb on - strand at 4718.197 kb on - strand at 4718.197 kb on - strand at 4718.197 kb on - strand at 4718.197 kb on - strand at 4718.212 kb on - strand at 4718.212 kb on - strand at 4718.291 kb on - strand at 4718.333 kb on - strand, within PfGW456L13_4207 at 4718.333 kb on - strand, within PfGW456L13_4207 at 4718.333 kb on - strand, within PfGW456L13_4207 at 4718.341 kb on + strand, within PfGW456L13_4207 at 4718.342 kb on - strand, within PfGW456L13_4207 at 4718.342 kb on - strand, within PfGW456L13_4207 at 4718.371 kb on + strand, within PfGW456L13_4207 at 4718.467 kb on + strand, within PfGW456L13_4207 at 4718.468 kb on - strand, within PfGW456L13_4207 at 4718.511 kb on + strand, within PfGW456L13_4207 at 4718.771 kb on - strand, within PfGW456L13_4207 at 4718.771 kb on - strand, within PfGW456L13_4207 at 4718.771 kb on - strand, within PfGW456L13_4207 at 4718.771 kb on - strand, within PfGW456L13_4207 at 4718.771 kb on - strand, within PfGW456L13_4207 at 4718.771 kb on - strand, within PfGW456L13_4207 at 4718.812 kb on + strand, within PfGW456L13_4207 at 4718.812 kb on + strand, within PfGW456L13_4207 at 4719.214 kb on + strand, within PfGW456L13_4207 at 4719.214 kb on + strand, within PfGW456L13_4207 at 4719.214 kb on + strand, within PfGW456L13_4207 at 4719.214 kb on + strand, within PfGW456L13_4207 at 4719.215 kb on - strand, within PfGW456L13_4207 at 4719.215 kb on - strand, within PfGW456L13_4207 at 4719.248 kb on - strand, within PfGW456L13_4207 at 4719.502 kb on + strand, within PfGW456L13_4207 at 4719.502 kb on + strand, within PfGW456L13_4207 at 4719.581 kb on - strand, within PfGW456L13_4207 at 4720.138 kb on + strand at 4720.139 kb on - strand at 4720.233 kb on + strand at 4720.233 kb on + strand at 4720.233 kb on + strand at 4720.234 kb on - strand at 4720.285 kb on + strand at 4720.285 kb on + strand at 4720.286 kb on - strand at 4720.286 kb on - strand at 4720.286 kb on - strand at 4720.308 kb on + strand at 4720.308 kb on + strand at 4720.308 kb on + strand at 4720.408 kb on - strand at 4720.408 kb on - strand at 4720.832 kb on + strand, within PfGW456L13_4208 at 4720.860 kb on + strand, within PfGW456L13_4208 at 4720.871 kb on + strand, within PfGW456L13_4208 at 4720.991 kb on - strand, within PfGW456L13_4208
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 4,717,358 + PfGW456L13_4206 0.48 +0.1 4,717,359 - PfGW456L13_4206 0.48 -1.4 4,717,359 - PfGW456L13_4206 0.48 +2.0 4,717,466 + PfGW456L13_4206 0.63 +1.5 4,717,466 + PfGW456L13_4206 0.63 -0.8 4,717,810 + +0.6 4,717,810 + -0.9 4,717,903 + +1.1 4,717,903 + +1.3 4,717,903 + -0.4 4,717,903 + -1.0 4,717,904 - -2.5 4,717,904 - -0.7 4,717,904 - -1.7 4,717,904 - +0.3 4,717,905 + +2.0 4,717,905 + -1.6 4,717,905 + -1.3 4,717,906 - +0.5 4,717,906 - -0.3 4,717,952 - -0.1 4,718,023 + -0.7 4,718,023 + -0.9 4,718,024 - -2.6 4,718,088 + +1.4 4,718,089 - -2.0 4,718,089 - -0.3 4,718,089 - -2.9 4,718,091 + -0.3 4,718,091 + -0.2 4,718,091 + -2.7 4,718,091 + -3.5 4,718,091 + -0.7 4,718,091 + -0.7 4,718,092 - -1.5 4,718,092 - -0.3 4,718,160 - -2.6 4,718,197 - -2.0 4,718,197 - +0.1 4,718,197 - -1.3 4,718,197 - -1.8 4,718,212 - +0.0 4,718,212 - -1.8 4,718,291 - -1.5 4,718,333 - PfGW456L13_4207 0.11 -3.2 4,718,333 - PfGW456L13_4207 0.11 +0.0 4,718,333 - PfGW456L13_4207 0.11 -3.2 4,718,341 + PfGW456L13_4207 0.12 +2.8 4,718,342 - PfGW456L13_4207 0.12 +0.0 4,718,342 - PfGW456L13_4207 0.12 -1.1 4,718,371 + PfGW456L13_4207 0.13 -2.9 4,718,467 + PfGW456L13_4207 0.18 +1.0 4,718,468 - PfGW456L13_4207 0.18 -1.6 4,718,511 + PfGW456L13_4207 0.20 -2.8 4,718,771 - PfGW456L13_4207 0.32 -3.4 4,718,771 - PfGW456L13_4207 0.32 +1.3 4,718,771 - PfGW456L13_4207 0.32 -1.0 4,718,771 - PfGW456L13_4207 0.32 -2.3 4,718,771 - PfGW456L13_4207 0.32 -1.6 4,718,771 - PfGW456L13_4207 0.32 -2.6 4,718,812 + PfGW456L13_4207 0.34 -2.2 4,718,812 + PfGW456L13_4207 0.34 -2.2 4,719,214 + PfGW456L13_4207 0.53 -3.3 4,719,214 + PfGW456L13_4207 0.53 -2.3 4,719,214 + PfGW456L13_4207 0.53 -1.8 4,719,214 + PfGW456L13_4207 0.53 -2.5 4,719,215 - PfGW456L13_4207 0.53 -2.2 4,719,215 - PfGW456L13_4207 0.53 -2.6 4,719,248 - PfGW456L13_4207 0.55 +1.0 4,719,502 + PfGW456L13_4207 0.67 -1.2 4,719,502 + PfGW456L13_4207 0.67 +0.7 4,719,581 - PfGW456L13_4207 0.70 -0.4 4,720,138 + -0.8 4,720,139 - -1.6 4,720,233 + -0.7 4,720,233 + +0.6 4,720,233 + -1.6 4,720,234 - -1.0 4,720,285 + +0.5 4,720,285 + +0.1 4,720,286 - +0.9 4,720,286 - +1.0 4,720,286 - +0.0 4,720,308 + -1.3 4,720,308 + +2.5 4,720,308 + -0.9 4,720,408 - -0.8 4,720,408 - -0.4 4,720,832 + PfGW456L13_4208 0.27 +0.2 4,720,860 + PfGW456L13_4208 0.28 -0.2 4,720,871 + PfGW456L13_4208 0.29 +0.9 4,720,991 - PfGW456L13_4208 0.36 +0.6
Or see this region's nucleotide sequence