Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4049 and PfGW456L13_4050 are separated by 126 nucleotides PfGW456L13_4050 and PfGW456L13_4051 are separated by 191 nucleotides PfGW456L13_4051 and PfGW456L13_4052 are separated by 222 nucleotides
PfGW456L13_4049 - Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps, at 4,545,361 to 4,546,755
_4049
PfGW456L13_4050 - tRNA 5-methylaminomethyl-2-thiouridine synthase TusA, at 4,546,882 to 4,547,133
_4050
PfGW456L13_4051 - LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM, at 4,547,325 to 4,548,398
_4051
PfGW456L13_4052 - Aconitate hydratase (EC 4.2.1.3), at 4,548,621 to 4,551,362
_4052
Position (kb)
4547
4548
4549 Strain fitness (log2 ratio)
-2
-1
0
1 at 4546.410 kb on + strand, within PfGW456L13_4049 at 4546.411 kb on - strand, within PfGW456L13_4049 at 4546.411 kb on - strand, within PfGW456L13_4049 at 4546.423 kb on + strand, within PfGW456L13_4049 at 4546.423 kb on + strand, within PfGW456L13_4049 at 4546.423 kb on + strand, within PfGW456L13_4049 at 4546.423 kb on + strand, within PfGW456L13_4049 at 4546.424 kb on - strand, within PfGW456L13_4049 at 4546.471 kb on + strand, within PfGW456L13_4049 at 4546.483 kb on + strand, within PfGW456L13_4049 at 4546.483 kb on + strand, within PfGW456L13_4049 at 4546.865 kb on + strand at 4546.865 kb on + strand at 4546.865 kb on + strand at 4546.866 kb on - strand at 4547.179 kb on + strand at 4547.179 kb on + strand at 4547.180 kb on - strand at 4547.212 kb on + strand at 4547.213 kb on - strand at 4547.213 kb on - strand at 4547.213 kb on - strand at 4547.213 kb on - strand at 4547.213 kb on - strand at 4547.393 kb on - strand at 4547.479 kb on + strand, within PfGW456L13_4051 at 4547.480 kb on - strand, within PfGW456L13_4051 at 4548.304 kb on + strand at 4548.305 kb on - strand at 4548.383 kb on + strand at 4548.384 kb on - strand at 4548.400 kb on - strand at 4548.400 kb on - strand at 4548.402 kb on + strand at 4548.403 kb on - strand at 4548.403 kb on - strand at 4548.417 kb on + strand at 4548.418 kb on - strand at 4548.522 kb on - strand at 4548.522 kb on - strand at 4548.533 kb on - strand at 4548.544 kb on - strand at 4548.558 kb on + strand at 4548.558 kb on + strand at 4548.558 kb on + strand at 4548.559 kb on - strand at 4548.559 kb on - strand at 4548.564 kb on + strand at 4548.564 kb on + strand at 4548.565 kb on - strand at 4548.644 kb on + strand at 4548.678 kb on + strand at 4548.679 kb on - strand at 4548.679 kb on - strand at 4548.679 kb on - strand at 4548.679 kb on - strand at 4548.679 kb on - strand at 4548.679 kb on - strand at 4548.684 kb on + strand at 4548.684 kb on + strand at 4548.684 kb on + strand at 4548.685 kb on - strand at 4548.685 kb on - strand at 4548.685 kb on - strand at 4548.685 kb on - strand at 4549.179 kb on + strand, within PfGW456L13_4052 at 4549.179 kb on + strand, within PfGW456L13_4052 at 4549.179 kb on + strand, within PfGW456L13_4052 at 4549.179 kb on + strand, within PfGW456L13_4052 at 4549.180 kb on - strand, within PfGW456L13_4052 at 4549.224 kb on + strand, within PfGW456L13_4052 at 4549.225 kb on - strand, within PfGW456L13_4052 at 4549.225 kb on - strand, within PfGW456L13_4052
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 4,546,410 + PfGW456L13_4049 0.75 -0.6 4,546,411 - PfGW456L13_4049 0.75 -0.8 4,546,411 - PfGW456L13_4049 0.75 -0.5 4,546,423 + PfGW456L13_4049 0.76 -0.6 4,546,423 + PfGW456L13_4049 0.76 -1.0 4,546,423 + PfGW456L13_4049 0.76 +0.6 4,546,423 + PfGW456L13_4049 0.76 -0.1 4,546,424 - PfGW456L13_4049 0.76 +0.5 4,546,471 + PfGW456L13_4049 0.80 -0.3 4,546,483 + PfGW456L13_4049 0.80 -0.4 4,546,483 + PfGW456L13_4049 0.80 +1.0 4,546,865 + +0.5 4,546,865 + +0.1 4,546,865 + -0.2 4,546,866 - +1.2 4,547,179 + -0.5 4,547,179 + -1.4 4,547,180 - +0.0 4,547,212 + -0.1 4,547,213 - +0.3 4,547,213 - +0.3 4,547,213 - +0.3 4,547,213 - +0.2 4,547,213 - -1.0 4,547,393 - -0.2 4,547,479 + PfGW456L13_4051 0.14 -0.3 4,547,480 - PfGW456L13_4051 0.14 -1.4 4,548,304 + +1.0 4,548,305 - -1.6 4,548,383 + -1.5 4,548,384 - +1.6 4,548,400 - +1.4 4,548,400 - -0.2 4,548,402 + -0.1 4,548,403 - +0.6 4,548,403 - +1.5 4,548,417 + -1.5 4,548,418 - +0.3 4,548,522 - -0.4 4,548,522 - +0.2 4,548,533 - -0.7 4,548,544 - -1.6 4,548,558 + +0.4 4,548,558 + -1.2 4,548,558 + +0.6 4,548,559 - +0.4 4,548,559 - -0.9 4,548,564 + -0.2 4,548,564 + -0.6 4,548,565 - -2.1 4,548,644 + +0.6 4,548,678 + -2.6 4,548,679 - +0.9 4,548,679 - -0.1 4,548,679 - -0.3 4,548,679 - -1.5 4,548,679 - -2.1 4,548,679 - -1.8 4,548,684 + +0.4 4,548,684 + +0.3 4,548,684 + -1.8 4,548,685 - -0.5 4,548,685 - +0.8 4,548,685 - -0.2 4,548,685 - +0.1 4,549,179 + PfGW456L13_4052 0.20 +0.6 4,549,179 + PfGW456L13_4052 0.20 -1.4 4,549,179 + PfGW456L13_4052 0.20 -0.2 4,549,179 + PfGW456L13_4052 0.20 -0.0 4,549,180 - PfGW456L13_4052 0.20 +1.3 4,549,224 + PfGW456L13_4052 0.22 -0.5 4,549,225 - PfGW456L13_4052 0.22 -0.1 4,549,225 - PfGW456L13_4052 0.22 -1.6
Or see this region's nucleotide sequence