Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4040 and PfGW456L13_4041 are separated by 29 nucleotides PfGW456L13_4041 and PfGW456L13_4042 are separated by 619 nucleotides
PfGW456L13_4040 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 4,532,353 to 4,533,528
_4040
PfGW456L13_4041 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 4,533,558 to 4,535,705
_4041
PfGW456L13_4042 - FIG00953628: hypothetical protein, at 4,536,325 to 4,536,744
_4042
Position (kb)
4533
4534
4535
4536 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4532.901 kb on - strand, within PfGW456L13_4040 at 4532.934 kb on - strand, within PfGW456L13_4040 at 4533.102 kb on - strand, within PfGW456L13_4040 at 4533.156 kb on + strand, within PfGW456L13_4040 at 4533.157 kb on - strand, within PfGW456L13_4040 at 4533.513 kb on + strand at 4533.514 kb on - strand at 4533.514 kb on - strand at 4533.528 kb on + strand at 4533.529 kb on - strand at 4533.529 kb on - strand at 4533.529 kb on - strand at 4533.529 kb on - strand at 4533.529 kb on - strand at 4533.545 kb on + strand at 4533.546 kb on - strand at 4533.546 kb on - strand at 4533.546 kb on - strand at 4533.617 kb on - strand at 4533.617 kb on - strand at 4533.638 kb on - strand at 4533.686 kb on - strand at 4533.938 kb on - strand at 4534.042 kb on - strand, within PfGW456L13_4041 at 4534.265 kb on - strand, within PfGW456L13_4041 at 4534.786 kb on + strand, within PfGW456L13_4041 at 4534.786 kb on + strand, within PfGW456L13_4041 at 4535.270 kb on - strand, within PfGW456L13_4041 at 4535.270 kb on - strand, within PfGW456L13_4041 at 4535.574 kb on + strand at 4535.691 kb on - strand at 4535.698 kb on + strand at 4535.699 kb on - strand at 4535.739 kb on - strand at 4535.739 kb on - strand at 4535.739 kb on - strand at 4535.790 kb on - strand at 4535.790 kb on - strand at 4535.854 kb on - strand at 4535.870 kb on + strand at 4535.871 kb on - strand at 4535.871 kb on - strand at 4535.962 kb on + strand at 4535.982 kb on + strand at 4535.983 kb on - strand at 4536.012 kb on + strand at 4536.012 kb on + strand at 4536.013 kb on - strand at 4536.060 kb on + strand at 4536.068 kb on + strand at 4536.068 kb on + strand at 4536.069 kb on - strand at 4536.069 kb on - strand at 4536.069 kb on - strand at 4536.069 kb on - strand at 4536.069 kb on - strand at 4536.069 kb on - strand at 4536.122 kb on + strand at 4536.122 kb on + strand at 4536.122 kb on + strand at 4536.122 kb on + strand at 4536.123 kb on - strand at 4536.123 kb on - strand at 4536.123 kb on - strand at 4536.123 kb on - strand at 4536.194 kb on - strand at 4536.194 kb on - strand at 4536.215 kb on + strand at 4536.392 kb on + strand, within PfGW456L13_4042 at 4536.393 kb on - strand, within PfGW456L13_4042 at 4536.393 kb on - strand, within PfGW456L13_4042 at 4536.429 kb on - strand, within PfGW456L13_4042 at 4536.499 kb on - strand, within PfGW456L13_4042 at 4536.527 kb on + strand, within PfGW456L13_4042 at 4536.528 kb on - strand, within PfGW456L13_4042
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 4,532,901 - PfGW456L13_4040 0.47 -0.2 4,532,934 - PfGW456L13_4040 0.49 +0.6 4,533,102 - PfGW456L13_4040 0.64 +0.6 4,533,156 + PfGW456L13_4040 0.68 -1.0 4,533,157 - PfGW456L13_4040 0.68 +1.1 4,533,513 + -2.4 4,533,514 - +1.4 4,533,514 - -0.6 4,533,528 + +0.5 4,533,529 - -1.0 4,533,529 - +0.3 4,533,529 - -1.2 4,533,529 - -0.6 4,533,529 - -0.7 4,533,545 + -1.8 4,533,546 - -2.6 4,533,546 - +1.9 4,533,546 - -0.7 4,533,617 - +0.6 4,533,617 - -0.3 4,533,638 - +1.0 4,533,686 - -0.0 4,533,938 - -0.0 4,534,042 - PfGW456L13_4041 0.23 +0.3 4,534,265 - PfGW456L13_4041 0.33 -1.8 4,534,786 + PfGW456L13_4041 0.57 -1.2 4,534,786 + PfGW456L13_4041 0.57 -1.0 4,535,270 - PfGW456L13_4041 0.80 -1.8 4,535,270 - PfGW456L13_4041 0.80 -0.6 4,535,574 + +0.3 4,535,691 - -0.8 4,535,698 + +0.4 4,535,699 - +0.7 4,535,739 - +0.2 4,535,739 - -0.6 4,535,739 - -1.7 4,535,790 - -0.2 4,535,790 - +0.4 4,535,854 - +1.3 4,535,870 + -0.8 4,535,871 - -0.3 4,535,871 - -0.4 4,535,962 + -2.1 4,535,982 + +1.8 4,535,983 - +1.0 4,536,012 + -0.3 4,536,012 + -1.2 4,536,013 - -0.4 4,536,060 + -2.0 4,536,068 + +0.3 4,536,068 + +0.1 4,536,069 - -0.4 4,536,069 - -0.2 4,536,069 - +0.9 4,536,069 - +0.5 4,536,069 - -1.0 4,536,069 - -0.4 4,536,122 + +0.7 4,536,122 + +1.0 4,536,122 + -3.1 4,536,122 + +0.5 4,536,123 - +1.6 4,536,123 - -0.5 4,536,123 - -0.2 4,536,123 - +0.9 4,536,194 - +0.1 4,536,194 - -0.0 4,536,215 + +0.4 4,536,392 + PfGW456L13_4042 0.16 +1.8 4,536,393 - PfGW456L13_4042 0.16 +0.9 4,536,393 - PfGW456L13_4042 0.16 -0.6 4,536,429 - PfGW456L13_4042 0.25 +0.0 4,536,499 - PfGW456L13_4042 0.41 -2.0 4,536,527 + PfGW456L13_4042 0.48 +1.0 4,536,528 - PfGW456L13_4042 0.48 +0.2
Or see this region's nucleotide sequence