Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3308 and PfGW456L13_3309 overlap by 4 nucleotides PfGW456L13_3309 and PfGW456L13_3310 are separated by 116 nucleotides PfGW456L13_3310 and PfGW456L13_3311 overlap by 4 nucleotides PfGW456L13_3311 and PfGW456L13_3312 are separated by 115 nucleotides PfGW456L13_3312 and PfGW456L13_3313 are separated by 216 nucleotides PfGW456L13_3313 and PfGW456L13_3314 are separated by 156 nucleotides
PfGW456L13_3308 - Exonuclease SbcC, at 3,717,436 to 3,721,077
_3308
PfGW456L13_3309 - Glutathione S-transferase family protein, at 3,721,074 to 3,721,670
_3309
PfGW456L13_3310 - hypothetical protein, at 3,721,787 to 3,722,044
_3310
PfGW456L13_3311 - hypothetical protein, at 3,722,041 to 3,722,253
_3311
PfGW456L13_3312 - hypothetical protein, at 3,722,369 to 3,722,494
_3312
PfGW456L13_3313 - FIG00957600: hypothetical protein, at 3,722,711 to 3,722,890
_3313
PfGW456L13_3314 - D-galactono-lactonase (EC 3.1.1.-) (from data) , at 3,723,047 to 3,724,216
_3314
Position (kb)
3722
3723 Strain fitness (log2 ratio)
-2
-1
0
1 at 3721.087 kb on - strand at 3721.087 kb on - strand at 3721.087 kb on - strand at 3721.087 kb on - strand at 3721.107 kb on + strand at 3721.500 kb on + strand, within PfGW456L13_3309 at 3721.501 kb on - strand, within PfGW456L13_3309 at 3721.668 kb on + strand at 3721.668 kb on + strand at 3721.669 kb on - strand at 3721.669 kb on - strand at 3721.683 kb on + strand at 3721.734 kb on + strand at 3721.734 kb on + strand at 3721.735 kb on - strand at 3721.735 kb on - strand at 3721.760 kb on + strand at 3721.760 kb on + strand at 3721.761 kb on - strand at 3721.761 kb on - strand at 3722.195 kb on + strand, within PfGW456L13_3311 at 3722.214 kb on - strand, within PfGW456L13_3311 at 3722.329 kb on + strand at 3722.742 kb on + strand, within PfGW456L13_3313 at 3722.743 kb on - strand, within PfGW456L13_3313 at 3722.766 kb on + strand, within PfGW456L13_3313 at 3722.767 kb on - strand, within PfGW456L13_3313 at 3722.778 kb on + strand, within PfGW456L13_3313 at 3722.778 kb on + strand, within PfGW456L13_3313 at 3722.778 kb on + strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.779 kb on - strand, within PfGW456L13_3313 at 3722.896 kb on + strand at 3722.948 kb on + strand at 3722.948 kb on + strand at 3722.982 kb on + strand at 3722.982 kb on + strand at 3722.982 kb on + strand at 3722.982 kb on + strand at 3722.982 kb on + strand at 3722.982 kb on + strand at 3722.982 kb on + strand at 3722.983 kb on - strand at 3722.983 kb on - strand at 3722.983 kb on - strand at 3722.995 kb on + strand at 3723.010 kb on + strand at 3723.010 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 3,721,087 - +0.0 3,721,087 - +0.5 3,721,087 - -0.9 3,721,087 - +0.5 3,721,107 + +0.0 3,721,500 + PfGW456L13_3309 0.71 +0.1 3,721,501 - PfGW456L13_3309 0.72 +0.1 3,721,668 + +1.2 3,721,668 + -0.6 3,721,669 - -0.2 3,721,669 - +0.8 3,721,683 + +0.1 3,721,734 + -0.4 3,721,734 + +0.4 3,721,735 - +0.3 3,721,735 - -2.0 3,721,760 + -1.0 3,721,760 + +0.2 3,721,761 - +0.2 3,721,761 - +0.7 3,722,195 + PfGW456L13_3311 0.72 -0.8 3,722,214 - PfGW456L13_3311 0.81 -0.4 3,722,329 + +0.1 3,722,742 + PfGW456L13_3313 0.17 +0.4 3,722,743 - PfGW456L13_3313 0.18 +0.6 3,722,766 + PfGW456L13_3313 0.31 +0.7 3,722,767 - PfGW456L13_3313 0.31 +0.4 3,722,778 + PfGW456L13_3313 0.37 -1.9 3,722,778 + PfGW456L13_3313 0.37 +0.1 3,722,778 + PfGW456L13_3313 0.37 -0.4 3,722,779 - PfGW456L13_3313 0.38 -0.7 3,722,779 - PfGW456L13_3313 0.38 -1.6 3,722,779 - PfGW456L13_3313 0.38 +0.8 3,722,779 - PfGW456L13_3313 0.38 -1.0 3,722,779 - PfGW456L13_3313 0.38 +0.9 3,722,779 - PfGW456L13_3313 0.38 +0.3 3,722,779 - PfGW456L13_3313 0.38 +0.7 3,722,779 - PfGW456L13_3313 0.38 +1.0 3,722,896 + -1.3 3,722,948 + -0.6 3,722,948 + +0.0 3,722,982 + -1.4 3,722,982 + +0.6 3,722,982 + +1.5 3,722,982 + -0.3 3,722,982 + -0.7 3,722,982 + +0.9 3,722,982 + +0.4 3,722,983 - -1.7 3,722,983 - -0.0 3,722,983 - -0.9 3,722,995 + -0.2 3,723,010 + +0.2 3,723,010 + -0.6
Or see this region's nucleotide sequence