Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2940 and PfGW456L13_2941 are separated by 239 nucleotides PfGW456L13_2941 and PfGW456L13_2942 are separated by 131 nucleotides PfGW456L13_2942 and PfGW456L13_2943 are separated by 415 nucleotides
PfGW456L13_2940 - Sugar diacid utilization regulator SdaR, at 3,277,620 to 3,278,741
_2940
PfGW456L13_2941 - Glycerate kinase (EC 2.7.1.31), at 3,278,981 to 3,280,117
_2941
PfGW456L13_2942 - hypothetical protein, at 3,280,249 to 3,280,608
_2942
PfGW456L13_2943 - Aspartate aminotransferase (EC 2.6.1.1), at 3,281,024 to 3,282,211
_2943
Position (kb)
3278
3279
3280
3281 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3278.112 kb on + strand, within PfGW456L13_2940 at 3278.112 kb on + strand, within PfGW456L13_2940 at 3278.112 kb on + strand, within PfGW456L13_2940 at 3278.112 kb on + strand, within PfGW456L13_2940 at 3278.112 kb on + strand, within PfGW456L13_2940 at 3278.113 kb on - strand, within PfGW456L13_2940 at 3278.113 kb on - strand, within PfGW456L13_2940 at 3278.113 kb on - strand, within PfGW456L13_2940 at 3278.362 kb on - strand, within PfGW456L13_2940 at 3278.697 kb on + strand at 3278.697 kb on + strand at 3278.697 kb on + strand at 3278.698 kb on - strand at 3278.698 kb on - strand at 3278.698 kb on - strand at 3278.698 kb on - strand at 3278.759 kb on + strand at 3278.759 kb on + strand at 3278.759 kb on + strand at 3278.759 kb on + strand at 3278.759 kb on + strand at 3278.759 kb on + strand at 3278.760 kb on - strand at 3278.800 kb on + strand at 3278.800 kb on + strand at 3278.801 kb on - strand at 3278.801 kb on - strand at 3278.825 kb on + strand at 3278.853 kb on + strand at 3278.853 kb on + strand at 3278.853 kb on + strand at 3278.854 kb on - strand at 3278.895 kb on + strand at 3278.895 kb on + strand at 3278.895 kb on + strand at 3278.896 kb on - strand at 3278.896 kb on - strand at 3278.896 kb on - strand at 3278.896 kb on - strand at 3279.775 kb on + strand, within PfGW456L13_2941 at 3279.980 kb on + strand, within PfGW456L13_2941 at 3280.197 kb on + strand at 3280.197 kb on + strand at 3280.197 kb on + strand at 3280.197 kb on + strand at 3280.198 kb on - strand at 3280.198 kb on - strand at 3280.250 kb on + strand at 3280.251 kb on - strand at 3280.251 kb on - strand at 3280.409 kb on + strand, within PfGW456L13_2942 at 3280.410 kb on - strand, within PfGW456L13_2942 at 3280.410 kb on - strand, within PfGW456L13_2942 at 3280.468 kb on - strand, within PfGW456L13_2942 at 3280.613 kb on + strand at 3280.613 kb on + strand at 3280.613 kb on + strand at 3280.613 kb on + strand at 3280.614 kb on - strand at 3280.614 kb on - strand at 3280.614 kb on - strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.621 kb on + strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.622 kb on - strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.623 kb on + strand at 3280.624 kb on - strand at 3280.624 kb on - strand at 3280.624 kb on - strand at 3280.648 kb on + strand at 3280.649 kb on - strand at 3280.670 kb on + strand at 3280.670 kb on + strand at 3280.670 kb on + strand at 3280.670 kb on + strand at 3280.671 kb on - strand at 3280.671 kb on - strand at 3280.680 kb on - strand at 3280.695 kb on + strand at 3280.695 kb on + strand at 3280.696 kb on - strand at 3280.696 kb on - strand at 3280.696 kb on - strand at 3280.733 kb on + strand at 3280.734 kb on - strand at 3280.734 kb on - strand at 3280.734 kb on - strand at 3280.734 kb on - strand at 3280.768 kb on + strand at 3280.775 kb on + strand at 3280.775 kb on + strand at 3280.787 kb on + strand at 3280.845 kb on - strand at 3280.887 kb on - strand at 3280.892 kb on + strand at 3280.928 kb on + strand at 3280.928 kb on + strand at 3280.929 kb on - strand at 3280.934 kb on + strand at 3280.935 kb on - strand at 3280.935 kb on - strand at 3280.935 kb on - strand at 3280.935 kb on - strand at 3280.944 kb on + strand at 3280.944 kb on + strand at 3280.945 kb on - strand at 3280.945 kb on - strand at 3280.985 kb on + strand at 3280.986 kb on - strand at 3280.986 kb on - strand at 3281.004 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 3,278,112 + PfGW456L13_2940 0.44 +0.2 3,278,112 + PfGW456L13_2940 0.44 -0.0 3,278,112 + PfGW456L13_2940 0.44 -0.5 3,278,112 + PfGW456L13_2940 0.44 +0.2 3,278,112 + PfGW456L13_2940 0.44 -0.6 3,278,113 - PfGW456L13_2940 0.44 +0.6 3,278,113 - PfGW456L13_2940 0.44 -1.3 3,278,113 - PfGW456L13_2940 0.44 -0.4 3,278,362 - PfGW456L13_2940 0.66 -0.0 3,278,697 + +0.3 3,278,697 + +0.1 3,278,697 + +0.7 3,278,698 - -1.0 3,278,698 - +0.7 3,278,698 - +0.7 3,278,698 - -0.7 3,278,759 + +0.4 3,278,759 + +0.4 3,278,759 + +1.1 3,278,759 + -0.2 3,278,759 + -1.1 3,278,759 + -1.6 3,278,760 - -0.5 3,278,800 + +1.4 3,278,800 + +0.5 3,278,801 - +0.3 3,278,801 - -0.5 3,278,825 + -0.5 3,278,853 + -0.4 3,278,853 + -0.0 3,278,853 + -0.3 3,278,854 - -1.5 3,278,895 + -0.4 3,278,895 + -0.1 3,278,895 + -0.9 3,278,896 - -0.3 3,278,896 - -0.2 3,278,896 - -0.1 3,278,896 - -0.8 3,279,775 + PfGW456L13_2941 0.70 -1.1 3,279,980 + PfGW456L13_2941 0.88 -2.8 3,280,197 + +0.6 3,280,197 + -0.2 3,280,197 + +0.2 3,280,197 + +0.1 3,280,198 - +0.5 3,280,198 - +0.2 3,280,250 + +0.5 3,280,251 - -1.1 3,280,251 - -0.2 3,280,409 + PfGW456L13_2942 0.44 +0.3 3,280,410 - PfGW456L13_2942 0.45 -0.7 3,280,410 - PfGW456L13_2942 0.45 -2.1 3,280,468 - PfGW456L13_2942 0.61 +1.9 3,280,613 + -0.0 3,280,613 + -0.7 3,280,613 + -0.1 3,280,613 + +0.2 3,280,614 - -0.5 3,280,614 - -0.1 3,280,614 - -0.0 3,280,621 + +0.2 3,280,621 + +0.1 3,280,621 + -0.1 3,280,621 + -0.5 3,280,621 + +0.9 3,280,621 + +0.1 3,280,621 + +0.5 3,280,621 + -1.3 3,280,621 + +0.5 3,280,621 + +1.1 3,280,622 - -0.4 3,280,622 - -0.0 3,280,622 - -0.4 3,280,622 - -0.5 3,280,622 - -1.2 3,280,622 - +0.8 3,280,622 - +0.0 3,280,622 - +0.8 3,280,622 - +1.0 3,280,622 - +1.0 3,280,622 - +0.3 3,280,622 - +0.2 3,280,623 + -0.3 3,280,623 + +0.0 3,280,623 + -1.2 3,280,623 + +3.0 3,280,623 + +0.3 3,280,623 + +0.7 3,280,623 + -0.2 3,280,623 + +0.3 3,280,623 + +0.2 3,280,623 + +0.4 3,280,623 + -1.1 3,280,624 - +0.8 3,280,624 - +0.6 3,280,624 - -1.3 3,280,648 + -1.5 3,280,649 - -0.2 3,280,670 + -0.6 3,280,670 + -0.5 3,280,670 + +0.9 3,280,670 + +1.1 3,280,671 - +1.4 3,280,671 - -0.9 3,280,680 - -0.2 3,280,695 + +0.2 3,280,695 + +0.6 3,280,696 - +1.1 3,280,696 - -2.0 3,280,696 - -0.3 3,280,733 + -0.4 3,280,734 - +1.2 3,280,734 - +1.1 3,280,734 - +1.0 3,280,734 - -0.1 3,280,768 + +0.9 3,280,775 + +1.0 3,280,775 + -0.2 3,280,787 + -0.6 3,280,845 - -0.7 3,280,887 - -0.7 3,280,892 + +0.5 3,280,928 + -0.3 3,280,928 + +1.0 3,280,929 - -1.4 3,280,934 + +0.1 3,280,935 - -0.4 3,280,935 - +0.5 3,280,935 - -0.6 3,280,935 - +1.1 3,280,944 + +0.1 3,280,944 + -0.0 3,280,945 - -1.4 3,280,945 - +0.4 3,280,985 + -0.5 3,280,986 - -0.7 3,280,986 - +0.9 3,281,004 - -0.3
Or see this region's nucleotide sequence