Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2815 and PfGW456L13_2816 overlap by 1 nucleotides PfGW456L13_2816 and PfGW456L13_2817 overlap by 4 nucleotides PfGW456L13_2817 and PfGW456L13_2818 overlap by 4 nucleotides PfGW456L13_2818 and PfGW456L13_2819 are separated by 165 nucleotides
PfGW456L13_2815 - Alkanesulfonates transport system permease protein, at 3,121,349 to 3,122,089
_2815
PfGW456L13_2816 - Various polyols ABC transporter, ATP-binding component, at 3,122,089 to 3,122,937
_2816
PfGW456L13_2817 - HEAT repeat-containing protein, at 3,122,934 to 3,123,896
_2817
PfGW456L13_2818 - FIG028220: hypothetical protein co-occurring with HEAT repeat protein, at 3,123,893 to 3,124,171
_2818
PfGW456L13_2819 - SOS-response repressor and protease LexA (EC 3.4.21.88), at 3,124,337 to 3,124,954
_2819
Position (kb) 3122
3123
3124 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 3121.940 kb on + strand, within PfGW456L13_2815 at 3121.940 kb on + strand, within PfGW456L13_2815 at 3121.940 kb on + strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.955 kb on + strand, within PfGW456L13_2815 at 3121.955 kb on + strand, within PfGW456L13_2815 at 3121.956 kb on - strand, within PfGW456L13_2815 at 3121.970 kb on + strand, within PfGW456L13_2815 at 3121.971 kb on - strand, within PfGW456L13_2815 at 3122.119 kb on - strand at 3122.646 kb on + strand, within PfGW456L13_2816 at 3122.953 kb on + strand at 3122.953 kb on + strand at 3123.014 kb on - strand at 3123.014 kb on - strand at 3123.227 kb on + strand, within PfGW456L13_2817 at 3123.227 kb on + strand, within PfGW456L13_2817 at 3123.296 kb on - strand, within PfGW456L13_2817 at 3123.296 kb on - strand, within PfGW456L13_2817 at 3123.815 kb on - strand at 3124.092 kb on - strand, within PfGW456L13_2818 at 3124.136 kb on + strand, within PfGW456L13_2818 at 3124.136 kb on + strand, within PfGW456L13_2818 at 3124.148 kb on + strand at 3124.148 kb on + strand at 3124.148 kb on + strand at 3124.149 kb on - strand at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.688 kb on + strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.689 kb on - strand, within PfGW456L13_2819 at 3124.877 kb on + strand, within PfGW456L13_2819 at 3124.877 kb on + strand, within PfGW456L13_2819
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 3,121,940 + PfGW456L13_2815 0.80 +0.1 3,121,940 + PfGW456L13_2815 0.80 +0.3 3,121,940 + PfGW456L13_2815 0.80 +0.1 3,121,941 - PfGW456L13_2815 0.80 -0.2 3,121,941 - PfGW456L13_2815 0.80 -0.7 3,121,941 - PfGW456L13_2815 0.80 +0.4 3,121,941 - PfGW456L13_2815 0.80 +1.5 3,121,941 - PfGW456L13_2815 0.80 -0.2 3,121,941 - PfGW456L13_2815 0.80 -0.7 3,121,955 + PfGW456L13_2815 0.82 -1.6 3,121,955 + PfGW456L13_2815 0.82 -1.8 3,121,956 - PfGW456L13_2815 0.82 -1.3 3,121,970 + PfGW456L13_2815 0.84 +0.5 3,121,971 - PfGW456L13_2815 0.84 -0.4 3,122,119 - +0.5 3,122,646 + PfGW456L13_2816 0.66 +0.5 3,122,953 + +0.4 3,122,953 + -1.4 3,123,014 - -1.1 3,123,014 - -1.5 3,123,227 + PfGW456L13_2817 0.30 -0.8 3,123,227 + PfGW456L13_2817 0.30 -1.2 3,123,296 - PfGW456L13_2817 0.38 +0.1 3,123,296 - PfGW456L13_2817 0.38 -1.0 3,123,815 - -0.3 3,124,092 - PfGW456L13_2818 0.71 +0.3 3,124,136 + PfGW456L13_2818 0.87 +2.0 3,124,136 + PfGW456L13_2818 0.87 +1.2 3,124,148 + +2.0 3,124,148 + +1.4 3,124,148 + +1.9 3,124,149 - +3.5 3,124,688 + PfGW456L13_2819 0.57 +0.5 3,124,688 + PfGW456L13_2819 0.57 +0.7 3,124,688 + PfGW456L13_2819 0.57 -2.8 3,124,688 + PfGW456L13_2819 0.57 +0.1 3,124,688 + PfGW456L13_2819 0.57 -0.1 3,124,688 + PfGW456L13_2819 0.57 -0.3 3,124,688 + -1.9 3,124,688 + PfGW456L13_2819 0.57 -0.3 3,124,688 + PfGW456L13_2819 0.57 -0.7 3,124,688 + PfGW456L13_2819 0.57 -1.3 3,124,688 + PfGW456L13_2819 0.57 -2.8 3,124,689 - PfGW456L13_2819 0.57 +0.9 3,124,689 - PfGW456L13_2819 0.57 +0.9 3,124,689 - PfGW456L13_2819 0.57 +0.1 3,124,689 - PfGW456L13_2819 0.57 +0.4 3,124,689 - PfGW456L13_2819 0.57 +0.2 3,124,877 + PfGW456L13_2819 0.87 -0.1 3,124,877 + PfGW456L13_2819 0.87 -3.1
Or see this region's nucleotide sequence