Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2601 and PfGW456L13_2602 are separated by 29 nucleotides PfGW456L13_2602 and PfGW456L13_2603 are separated by 237 nucleotides PfGW456L13_2603 and PfGW456L13_2604 are separated by 11 nucleotides
PfGW456L13_2601 - Uncharacterized protein YtfM precursor, at 2,889,881 to 2,891,608
_2601
PfGW456L13_2602 - putative exported protein, at 2,891,638 to 2,895,276
_2602
PfGW456L13_2603 - Transcriptional regulator, MarR family, at 2,895,514 to 2,895,987
_2603
PfGW456L13_2604 - Outer membrane component of tripartite multidrug resistance system, at 2,895,999 to 2,897,453
_2604
Position (kb)
2891
2892
2893
2894
2895
2896 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2890.769 kb on + strand, within PfGW456L13_2601 at 2890.769 kb on + strand, within PfGW456L13_2601 at 2890.770 kb on - strand, within PfGW456L13_2601 at 2890.770 kb on - strand, within PfGW456L13_2601 at 2890.770 kb on - strand, within PfGW456L13_2601 at 2890.820 kb on + strand, within PfGW456L13_2601 at 2890.820 kb on + strand, within PfGW456L13_2601 at 2890.821 kb on - strand, within PfGW456L13_2601 at 2891.000 kb on + strand, within PfGW456L13_2601 at 2891.000 kb on + strand, within PfGW456L13_2601 at 2891.029 kb on + strand, within PfGW456L13_2601 at 2891.030 kb on - strand, within PfGW456L13_2601 at 2891.054 kb on + strand, within PfGW456L13_2601 at 2891.054 kb on + strand, within PfGW456L13_2601 at 2891.055 kb on - strand, within PfGW456L13_2601 at 2891.055 kb on - strand, within PfGW456L13_2601 at 2891.055 kb on - strand, within PfGW456L13_2601 at 2891.055 kb on - strand, within PfGW456L13_2601 at 2891.055 kb on - strand, within PfGW456L13_2601 at 2891.060 kb on + strand, within PfGW456L13_2601 at 2891.060 kb on + strand, within PfGW456L13_2601 at 2891.061 kb on - strand, within PfGW456L13_2601 at 2891.315 kb on + strand, within PfGW456L13_2601 at 2891.315 kb on + strand, within PfGW456L13_2601 at 2891.321 kb on + strand, within PfGW456L13_2601 at 2891.321 kb on + strand, within PfGW456L13_2601 at 2891.322 kb on - strand, within PfGW456L13_2601 at 2891.372 kb on + strand, within PfGW456L13_2601 at 2891.372 kb on + strand, within PfGW456L13_2601 at 2891.372 kb on + strand, within PfGW456L13_2601 at 2891.373 kb on - strand, within PfGW456L13_2601 at 2891.373 kb on - strand, within PfGW456L13_2601 at 2891.396 kb on + strand, within PfGW456L13_2601 at 2891.397 kb on - strand, within PfGW456L13_2601 at 2891.397 kb on - strand, within PfGW456L13_2601 at 2891.402 kb on + strand, within PfGW456L13_2601 at 2891.970 kb on - strand at 2892.652 kb on + strand, within PfGW456L13_2602 at 2892.677 kb on + strand, within PfGW456L13_2602 at 2892.678 kb on - strand, within PfGW456L13_2602 at 2892.709 kb on + strand, within PfGW456L13_2602 at 2892.710 kb on - strand, within PfGW456L13_2602 at 2892.724 kb on + strand, within PfGW456L13_2602 at 2892.724 kb on + strand, within PfGW456L13_2602 at 2892.725 kb on - strand, within PfGW456L13_2602 at 2892.725 kb on - strand, within PfGW456L13_2602 at 2892.725 kb on - strand, within PfGW456L13_2602 at 2892.812 kb on - strand, within PfGW456L13_2602 at 2892.931 kb on + strand, within PfGW456L13_2602 at 2892.931 kb on + strand, within PfGW456L13_2602 at 2893.104 kb on + strand, within PfGW456L13_2602 at 2893.105 kb on - strand, within PfGW456L13_2602 at 2893.416 kb on - strand, within PfGW456L13_2602 at 2893.721 kb on - strand, within PfGW456L13_2602 at 2893.721 kb on - strand, within PfGW456L13_2602 at 2894.216 kb on + strand, within PfGW456L13_2602 at 2894.216 kb on + strand, within PfGW456L13_2602 at 2894.217 kb on - strand, within PfGW456L13_2602 at 2894.298 kb on + strand, within PfGW456L13_2602 at 2894.803 kb on + strand, within PfGW456L13_2602 at 2894.932 kb on + strand at 2894.933 kb on - strand at 2894.933 kb on - strand at 2894.933 kb on - strand at 2895.018 kb on + strand at 2895.019 kb on - strand at 2895.019 kb on - strand at 2895.019 kb on - strand at 2895.124 kb on - strand at 2895.124 kb on - strand at 2895.124 kb on - strand at 2895.124 kb on - strand at 2895.178 kb on - strand at 2895.178 kb on - strand at 2895.215 kb on - strand at 2895.259 kb on + strand at 2895.259 kb on + strand at 2895.260 kb on - strand at 2895.260 kb on - strand at 2895.274 kb on + strand at 2895.275 kb on - strand at 2895.275 kb on - strand at 2895.417 kb on + strand at 2895.433 kb on + strand at 2895.434 kb on - strand at 2895.434 kb on - strand at 2895.437 kb on + strand at 2895.437 kb on + strand at 2895.437 kb on + strand at 2895.437 kb on + strand at 2895.438 kb on - strand at 2895.460 kb on - strand at 2895.467 kb on - strand at 2895.492 kb on + strand at 2895.500 kb on + strand at 2895.500 kb on + strand at 2895.501 kb on - strand at 2895.692 kb on + strand, within PfGW456L13_2603 at 2895.693 kb on - strand, within PfGW456L13_2603 at 2895.974 kb on + strand at 2895.975 kb on - strand at 2895.993 kb on - strand at 2896.056 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 2,890,769 + PfGW456L13_2601 0.51 -0.5 2,890,769 + PfGW456L13_2601 0.51 +0.1 2,890,770 - PfGW456L13_2601 0.51 -2.7 2,890,770 - PfGW456L13_2601 0.51 -2.0 2,890,770 - PfGW456L13_2601 0.51 -0.9 2,890,820 + PfGW456L13_2601 0.54 -1.3 2,890,820 + PfGW456L13_2601 0.54 -0.5 2,890,821 - PfGW456L13_2601 0.54 -0.8 2,891,000 + PfGW456L13_2601 0.65 -0.6 2,891,000 + PfGW456L13_2601 0.65 +0.0 2,891,029 + PfGW456L13_2601 0.66 -1.7 2,891,030 - PfGW456L13_2601 0.66 -2.0 2,891,054 + PfGW456L13_2601 0.68 -0.7 2,891,054 + PfGW456L13_2601 0.68 -1.4 2,891,055 - PfGW456L13_2601 0.68 +0.0 2,891,055 - PfGW456L13_2601 0.68 -0.5 2,891,055 - PfGW456L13_2601 0.68 -2.7 2,891,055 - PfGW456L13_2601 0.68 -0.2 2,891,055 - PfGW456L13_2601 0.68 +1.2 2,891,060 + PfGW456L13_2601 0.68 +0.6 2,891,060 + PfGW456L13_2601 0.68 +1.7 2,891,061 - PfGW456L13_2601 0.68 -0.3 2,891,315 + PfGW456L13_2601 0.83 +0.2 2,891,315 + PfGW456L13_2601 0.83 -1.5 2,891,321 + PfGW456L13_2601 0.83 -1.7 2,891,321 + PfGW456L13_2601 0.83 -1.2 2,891,322 - PfGW456L13_2601 0.83 +0.2 2,891,372 + PfGW456L13_2601 0.86 +0.4 2,891,372 + PfGW456L13_2601 0.86 -0.5 2,891,372 + PfGW456L13_2601 0.86 -1.2 2,891,373 - PfGW456L13_2601 0.86 -1.6 2,891,373 - PfGW456L13_2601 0.86 -1.2 2,891,396 + PfGW456L13_2601 0.88 -3.3 2,891,397 - PfGW456L13_2601 0.88 -1.3 2,891,397 - PfGW456L13_2601 0.88 -0.9 2,891,402 + PfGW456L13_2601 0.88 +0.9 2,891,970 - +0.5 2,892,652 + PfGW456L13_2602 0.28 -2.4 2,892,677 + PfGW456L13_2602 0.29 -1.1 2,892,678 - PfGW456L13_2602 0.29 -1.1 2,892,709 + PfGW456L13_2602 0.29 -1.8 2,892,710 - PfGW456L13_2602 0.29 +0.3 2,892,724 + PfGW456L13_2602 0.30 -0.4 2,892,724 + PfGW456L13_2602 0.30 -1.0 2,892,725 - PfGW456L13_2602 0.30 -0.9 2,892,725 - PfGW456L13_2602 0.30 +0.2 2,892,725 - PfGW456L13_2602 0.30 -0.1 2,892,812 - PfGW456L13_2602 0.32 -0.8 2,892,931 + PfGW456L13_2602 0.36 -3.3 2,892,931 + PfGW456L13_2602 0.36 -0.6 2,893,104 + PfGW456L13_2602 0.40 -0.8 2,893,105 - PfGW456L13_2602 0.40 -1.0 2,893,416 - PfGW456L13_2602 0.49 -1.7 2,893,721 - PfGW456L13_2602 0.57 -0.4 2,893,721 - PfGW456L13_2602 0.57 -0.0 2,894,216 + PfGW456L13_2602 0.71 -0.0 2,894,216 + PfGW456L13_2602 0.71 -2.5 2,894,217 - PfGW456L13_2602 0.71 -0.5 2,894,298 + PfGW456L13_2602 0.73 -1.0 2,894,803 + PfGW456L13_2602 0.87 -1.3 2,894,932 + -1.2 2,894,933 - -0.4 2,894,933 - -0.7 2,894,933 - -0.5 2,895,018 + -1.3 2,895,019 - -0.8 2,895,019 - -0.8 2,895,019 - -2.7 2,895,124 - -1.4 2,895,124 - -0.6 2,895,124 - -0.1 2,895,124 - -1.3 2,895,178 - -1.2 2,895,178 - +0.5 2,895,215 - -0.3 2,895,259 + -0.7 2,895,259 + -0.9 2,895,260 - -0.2 2,895,260 - +0.0 2,895,274 + -0.5 2,895,275 - -0.4 2,895,275 - +0.1 2,895,417 + +0.2 2,895,433 + +1.5 2,895,434 - -1.7 2,895,434 - +0.2 2,895,437 + -1.7 2,895,437 + +0.1 2,895,437 + -0.8 2,895,437 + -1.1 2,895,438 - -0.5 2,895,460 - +0.2 2,895,467 - -0.3 2,895,492 + -0.3 2,895,500 + -0.7 2,895,500 + -1.4 2,895,501 - -0.1 2,895,692 + PfGW456L13_2603 0.38 +0.4 2,895,693 - PfGW456L13_2603 0.38 -2.2 2,895,974 + +0.1 2,895,975 - +0.6 2,895,993 - -0.3 2,896,056 + +0.4
Or see this region's nucleotide sequence