Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_258 and PfGW456L13_259 overlap by 4 nucleotides PfGW456L13_259 and PfGW456L13_260 overlap by 4 nucleotides PfGW456L13_260 and PfGW456L13_261 are separated by 16 nucleotides PfGW456L13_261 and PfGW456L13_262 are separated by 19 nucleotides
PfGW456L13_258 - General secretion pathway protein L, at 302,298 to 303,404
_258
PfGW456L13_259 - General secretion pathway protein K, at 303,401 to 304,252
_259
PfGW456L13_260 - General secretion pathway protein J, at 304,249 to 304,767
_260
PfGW456L13_261 - General secretion pathway protein I, at 304,784 to 305,140
_261
PfGW456L13_262 - hypothetical protein, at 305,160 to 305,588
_262
Position (kb) 303
304
305 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 302.754 kb on + strand, within PfGW456L13_258 at 302.754 kb on + strand, within PfGW456L13_258 at 303.176 kb on - strand, within PfGW456L13_258 at 303.237 kb on - strand, within PfGW456L13_258 at 303.237 kb on - strand, within PfGW456L13_258 at 303.237 kb on - strand, within PfGW456L13_258 at 303.237 kb on - strand, within PfGW456L13_258 at 303.237 kb on - strand, within PfGW456L13_258 at 303.237 kb on - strand, within PfGW456L13_258 at 303.388 kb on + strand at 303.422 kb on - strand at 303.540 kb on + strand, within PfGW456L13_259 at 304.055 kb on + strand, within PfGW456L13_259 at 304.214 kb on + strand at 304.214 kb on + strand at 304.214 kb on + strand at 304.215 kb on - strand at 304.215 kb on - strand at 304.215 kb on - strand at 304.215 kb on - strand at 304.215 kb on - strand at 304.215 kb on - strand at 304.215 kb on - strand at 304.215 kb on - strand at 304.342 kb on - strand, within PfGW456L13_260 at 304.342 kb on - strand, within PfGW456L13_260 at 304.497 kb on - strand, within PfGW456L13_260 at 304.504 kb on + strand, within PfGW456L13_260 at 304.505 kb on - strand, within PfGW456L13_260 at 304.786 kb on - strand at 304.802 kb on + strand at 304.821 kb on + strand, within PfGW456L13_261 at 304.871 kb on + strand, within PfGW456L13_261 at 304.872 kb on - strand, within PfGW456L13_261 at 304.979 kb on + strand, within PfGW456L13_261 at 304.980 kb on - strand, within PfGW456L13_261 at 305.055 kb on + strand, within PfGW456L13_261 at 305.056 kb on - strand, within PfGW456L13_261
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 302,754 + PfGW456L13_258 0.41 -0.2 302,754 + PfGW456L13_258 0.41 -0.8 303,176 - PfGW456L13_258 0.79 -0.7 303,237 - PfGW456L13_258 0.85 -0.3 303,237 - PfGW456L13_258 0.85 -1.2 303,237 - PfGW456L13_258 0.85 -2.3 303,237 - PfGW456L13_258 0.85 +0.2 303,237 - PfGW456L13_258 0.85 +0.9 303,237 - PfGW456L13_258 0.85 +0.9 303,388 + -0.2 303,422 - +0.9 303,540 + PfGW456L13_259 0.16 -0.3 304,055 + PfGW456L13_259 0.77 -1.3 304,214 + -0.4 304,214 + -0.1 304,214 + +0.7 304,215 - -0.2 304,215 - +0.3 304,215 - +0.4 304,215 - +0.2 304,215 - -0.1 304,215 - +1.7 304,215 - -3.3 304,215 - -2.5 304,342 - PfGW456L13_260 0.18 +0.4 304,342 - PfGW456L13_260 0.18 -0.2 304,497 - PfGW456L13_260 0.48 +0.1 304,504 + PfGW456L13_260 0.49 -0.5 304,505 - PfGW456L13_260 0.49 -0.1 304,786 - -0.3 304,802 + -0.7 304,821 + PfGW456L13_261 0.10 -3.1 304,871 + PfGW456L13_261 0.24 -0.6 304,872 - PfGW456L13_261 0.25 +0.8 304,979 + PfGW456L13_261 0.55 -0.3 304,980 - PfGW456L13_261 0.55 -1.0 305,055 + PfGW456L13_261 0.76 -1.0 305,056 - PfGW456L13_261 0.76 -0.0
Or see this region's nucleotide sequence