Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2572 and PfGW456L13_2573 are separated by 121 nucleotides PfGW456L13_2573 and PfGW456L13_2574 are separated by 268 nucleotides
PfGW456L13_2572 - Phosphonate uptake and metabolism regulator, LysR-family, at 2,857,941 to 2,858,804
_2572
PfGW456L13_2573 - transcriptional regulator, MerR family, at 2,858,926 to 2,859,798
_2573
PfGW456L13_2574 - Glycerol-3-phosphate transporter, at 2,860,067 to 2,861,392
_2574
Position (kb)
2858
2859
2860 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2858.067 kb on + strand, within PfGW456L13_2572 at 2858.068 kb on - strand, within PfGW456L13_2572 at 2858.468 kb on + strand, within PfGW456L13_2572 at 2858.468 kb on + strand, within PfGW456L13_2572 at 2858.742 kb on - strand at 2858.742 kb on - strand at 2858.742 kb on - strand at 2858.802 kb on + strand at 2858.802 kb on + strand at 2858.802 kb on + strand at 2858.866 kb on + strand at 2858.867 kb on - strand at 2858.877 kb on + strand at 2858.877 kb on + strand at 2858.878 kb on - strand at 2859.226 kb on + strand, within PfGW456L13_2573 at 2859.226 kb on + strand, within PfGW456L13_2573 at 2859.227 kb on - strand, within PfGW456L13_2573 at 2859.386 kb on + strand, within PfGW456L13_2573 at 2859.386 kb on + strand, within PfGW456L13_2573 at 2859.387 kb on - strand, within PfGW456L13_2573 at 2859.738 kb on + strand at 2859.739 kb on - strand at 2859.739 kb on - strand at 2859.943 kb on + strand at 2859.943 kb on + strand at 2860.145 kb on + strand at 2860.146 kb on - strand at 2860.244 kb on + strand, within PfGW456L13_2574 at 2860.244 kb on + strand at 2860.244 kb on + strand, within PfGW456L13_2574 at 2860.244 kb on + strand, within PfGW456L13_2574 at 2860.244 kb on + strand, within PfGW456L13_2574 at 2860.244 kb on + strand, within PfGW456L13_2574 at 2860.245 kb on - strand, within PfGW456L13_2574 at 2860.245 kb on - strand, within PfGW456L13_2574 at 2860.245 kb on - strand, within PfGW456L13_2574 at 2860.245 kb on - strand, within PfGW456L13_2574 at 2860.245 kb on - strand, within PfGW456L13_2574 at 2860.245 kb on - strand, within PfGW456L13_2574 at 2860.256 kb on + strand, within PfGW456L13_2574 at 2860.257 kb on - strand, within PfGW456L13_2574 at 2860.390 kb on + strand, within PfGW456L13_2574 at 2860.404 kb on + strand, within PfGW456L13_2574 at 2860.404 kb on + strand, within PfGW456L13_2574 at 2860.404 kb on + strand, within PfGW456L13_2574 at 2860.404 kb on + strand, within PfGW456L13_2574 at 2860.404 kb on + strand, within PfGW456L13_2574 at 2860.405 kb on - strand, within PfGW456L13_2574 at 2860.405 kb on - strand, within PfGW456L13_2574 at 2860.405 kb on - strand, within PfGW456L13_2574 at 2860.405 kb on - strand, within PfGW456L13_2574 at 2860.405 kb on - strand, within PfGW456L13_2574 at 2860.405 kb on - strand, within PfGW456L13_2574 at 2860.489 kb on - strand, within PfGW456L13_2574 at 2860.511 kb on + strand, within PfGW456L13_2574 at 2860.559 kb on + strand, within PfGW456L13_2574 at 2860.559 kb on + strand, within PfGW456L13_2574 at 2860.559 kb on + strand, within PfGW456L13_2574 at 2860.560 kb on - strand, within PfGW456L13_2574 at 2860.796 kb on + strand, within PfGW456L13_2574 at 2860.796 kb on + strand, within PfGW456L13_2574 at 2860.797 kb on - strand, within PfGW456L13_2574 at 2860.797 kb on - strand, within PfGW456L13_2574 at 2860.797 kb on - strand, within PfGW456L13_2574 at 2860.797 kb on - strand, within PfGW456L13_2574 at 2860.797 kb on - strand, within PfGW456L13_2574
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 2,858,067 + PfGW456L13_2572 0.15 -0.6 2,858,068 - PfGW456L13_2572 0.15 +0.3 2,858,468 + PfGW456L13_2572 0.61 +0.9 2,858,468 + PfGW456L13_2572 0.61 -0.9 2,858,742 - -0.2 2,858,742 - +1.2 2,858,742 - +0.1 2,858,802 + -0.7 2,858,802 + -0.2 2,858,802 + -1.1 2,858,866 + +0.7 2,858,867 - -1.8 2,858,877 + -1.8 2,858,877 + +1.7 2,858,878 - -0.9 2,859,226 + PfGW456L13_2573 0.34 -1.0 2,859,226 + PfGW456L13_2573 0.34 -0.8 2,859,227 - PfGW456L13_2573 0.34 +0.2 2,859,386 + PfGW456L13_2573 0.53 -0.6 2,859,386 + PfGW456L13_2573 0.53 -1.9 2,859,387 - PfGW456L13_2573 0.53 -0.6 2,859,738 + -1.3 2,859,739 - +0.5 2,859,739 - -1.2 2,859,943 + +1.6 2,859,943 + +0.2 2,860,145 + +1.9 2,860,146 - -0.2 2,860,244 + PfGW456L13_2574 0.13 -2.6 2,860,244 + +0.8 2,860,244 + PfGW456L13_2574 0.13 +1.2 2,860,244 + PfGW456L13_2574 0.13 -0.1 2,860,244 + PfGW456L13_2574 0.13 +1.1 2,860,244 + PfGW456L13_2574 0.13 +0.6 2,860,245 - PfGW456L13_2574 0.13 -0.3 2,860,245 - PfGW456L13_2574 0.13 -0.1 2,860,245 - PfGW456L13_2574 0.13 -1.2 2,860,245 - PfGW456L13_2574 0.13 -0.5 2,860,245 - PfGW456L13_2574 0.13 -0.5 2,860,245 - PfGW456L13_2574 0.13 -0.8 2,860,256 + PfGW456L13_2574 0.14 -1.6 2,860,257 - PfGW456L13_2574 0.14 -1.5 2,860,390 + PfGW456L13_2574 0.24 +0.2 2,860,404 + PfGW456L13_2574 0.25 -0.1 2,860,404 + PfGW456L13_2574 0.25 -0.2 2,860,404 + PfGW456L13_2574 0.25 -1.0 2,860,404 + PfGW456L13_2574 0.25 -1.8 2,860,404 + PfGW456L13_2574 0.25 -0.2 2,860,405 - PfGW456L13_2574 0.25 -1.1 2,860,405 - PfGW456L13_2574 0.25 -0.4 2,860,405 - PfGW456L13_2574 0.25 +0.6 2,860,405 - PfGW456L13_2574 0.25 -0.2 2,860,405 - PfGW456L13_2574 0.25 +1.6 2,860,405 - PfGW456L13_2574 0.25 -1.6 2,860,489 - PfGW456L13_2574 0.32 -1.7 2,860,511 + PfGW456L13_2574 0.33 +1.0 2,860,559 + PfGW456L13_2574 0.37 -0.3 2,860,559 + PfGW456L13_2574 0.37 -0.5 2,860,559 + PfGW456L13_2574 0.37 +0.3 2,860,560 - PfGW456L13_2574 0.37 +1.2 2,860,796 + PfGW456L13_2574 0.55 +0.2 2,860,796 + PfGW456L13_2574 0.55 -0.1 2,860,797 - PfGW456L13_2574 0.55 +1.1 2,860,797 - PfGW456L13_2574 0.55 +0.2 2,860,797 - PfGW456L13_2574 0.55 -0.3 2,860,797 - PfGW456L13_2574 0.55 -0.5 2,860,797 - PfGW456L13_2574 0.55 +0.3
Or see this region's nucleotide sequence