Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2559

Experiment: Aluminum chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 5 mM
2,828,941	+				-0.2
2,828,941	+				+2.3
2,828,942	-				+0.7
2,828,942	-				-2.1
2,828,984	-		PfGW456L13_2558	0.10	+1.3
2,829,018	+		PfGW456L13_2558	0.13	+0.0
2,829,018	+		PfGW456L13_2558	0.13	-0.2
2,829,018	+		PfGW456L13_2558	0.13	-1.5
2,829,018	+		PfGW456L13_2558	0.13	+0.6
2,829,019	-		PfGW456L13_2558	0.14	+0.1
2,829,019	-		PfGW456L13_2558	0.14	-1.5
2,829,022	+		PfGW456L13_2558	0.14	+0.3
2,829,023	-		PfGW456L13_2558	0.14	+0.3
2,829,023	-		PfGW456L13_2558	0.14	-1.5
2,829,370	+		PfGW456L13_2558	0.48	+0.7
2,829,370	+		PfGW456L13_2558	0.48	-0.7
2,829,371	-		PfGW456L13_2558	0.48	-0.4
2,829,371	-		PfGW456L13_2558	0.48	-0.5
2,829,496	+		PfGW456L13_2558	0.60	+0.0
2,829,496	+		PfGW456L13_2558	0.60	+2.0
2,829,496	+		PfGW456L13_2558	0.60	-0.7
2,829,496	+		PfGW456L13_2558	0.60	+0.2
2,829,497	-		PfGW456L13_2558	0.60	+1.3
2,829,497	-		PfGW456L13_2558	0.60	-0.8
2,829,497	-		PfGW456L13_2558	0.60	+0.0
2,829,505	+		PfGW456L13_2558	0.61	-0.0
2,829,506	-		PfGW456L13_2558	0.61	+0.2
2,829,506	-		PfGW456L13_2558	0.61	+1.7
2,829,506	-		PfGW456L13_2558	0.61	+1.8
2,829,520	+		PfGW456L13_2558	0.62	+0.3
2,829,520	+		PfGW456L13_2558	0.62	-1.9
2,829,521	-		PfGW456L13_2558	0.62	-1.2
2,829,574	+		PfGW456L13_2558	0.68	-0.1
2,829,586	+		PfGW456L13_2558	0.69	-0.1
2,829,586	+		PfGW456L13_2558	0.69	+0.1
2,829,586	+		PfGW456L13_2558	0.69	+0.1
2,829,586	+		PfGW456L13_2558	0.69	-0.2
2,829,586	+		PfGW456L13_2558	0.69	-0.0
2,829,586	+		PfGW456L13_2558	0.69	+0.1
2,829,586	+		PfGW456L13_2558	0.69	-1.0
2,829,586	+		PfGW456L13_2558	0.69	-1.4
2,829,586	+		PfGW456L13_2558	0.69	+2.8
2,829,587	-		PfGW456L13_2558	0.69	+1.3
2,829,587	-		PfGW456L13_2558	0.69	-1.2
2,829,587	-		PfGW456L13_2558	0.69	-0.9
2,829,587	-		PfGW456L13_2558	0.69	+1.3
2,829,587	-		PfGW456L13_2558	0.69	-1.9
2,829,587	-		PfGW456L13_2558	0.69	-0.3
2,829,587	-		PfGW456L13_2558	0.69	+1.4
2,829,587	-		PfGW456L13_2558	0.69	+0.6
2,829,755	-		PfGW456L13_2558	0.85	-0.2
2,829,812	-				+0.6
2,829,837	+				-0.1
2,829,837	+				-0.7
2,829,838	-				+1.3
2,829,924	+				-0.7
2,829,925	-				+1.1
2,829,985	+				-1.8
2,829,986	-				-3.9
2,830,235	+		PfGW456L13_2559	0.28	-0.2
2,830,235	+		PfGW456L13_2559	0.28	-0.1
2,830,236	-		PfGW456L13_2559	0.28	-1.6
2,830,236	-		PfGW456L13_2559	0.28	-2.3
2,830,236	-		PfGW456L13_2559	0.28	-0.5
2,830,236	-		PfGW456L13_2559	0.28	-0.2
2,830,236	-		PfGW456L13_2559	0.28	-1.7
2,830,236	-		PfGW456L13_2559	0.28	-0.3
2,830,260	+		PfGW456L13_2559	0.30	-0.2
2,830,260	+		PfGW456L13_2559	0.30	-0.3
2,830,260	+		PfGW456L13_2559	0.30	-2.7
2,830,261	-		PfGW456L13_2559	0.30	-1.2
2,830,296	-		PfGW456L13_2559	0.33	-1.7
2,830,385	+		PfGW456L13_2559	0.41	-1.4
2,830,385	+		PfGW456L13_2559	0.41	-1.0
2,830,386	-		PfGW456L13_2559	0.41	-0.4
2,830,386	-		PfGW456L13_2559	0.41	-1.3
2,830,386	-		PfGW456L13_2559	0.41	+0.4
2,830,386	-		PfGW456L13_2559	0.41	-1.0
2,830,446	+		PfGW456L13_2559	0.46	-2.1
2,830,447	-		PfGW456L13_2559	0.46	+0.4
2,830,566	+		PfGW456L13_2559	0.57	-1.4
2,830,567	-		PfGW456L13_2559	0.57	-0.6
2,830,567	-		PfGW456L13_2559	0.57	-1.9
2,830,595	-		PfGW456L13_2559	0.59	+0.6
2,830,713	+		PfGW456L13_2559	0.70	-2.6
2,830,713	+		PfGW456L13_2559	0.70	-0.5
2,830,714	-		PfGW456L13_2559	0.70	-0.0
2,830,822	-		PfGW456L13_2559	0.79	-1.8
2,830,822	-		PfGW456L13_2559	0.79	-2.0
2,830,860	+		PfGW456L13_2559	0.83	+0.7
2,830,959	+				-0.7
2,830,959	+				-3.3
2,830,959	+				-0.9
2,830,960	-				+0.3
2,830,960	-				+0.3
2,830,960	-				-0.3
2,830,960	-				-1.2
2,830,995	+				+0.0
2,830,995	+				-2.2
2,831,286	+				-0.4
2,831,286	+				+0.9
2,831,286	+				-0.1
2,831,287	-				-0.6
2,831,287	-				-0.2
2,831,361	+				+0.5
2,831,550	+		PfGW456L13_2560	0.22	-2.1
2,831,665	-		PfGW456L13_2560	0.31	-0.7
2,831,665	-		PfGW456L13_2560	0.31	-0.2
2,831,830	-		PfGW456L13_2560	0.43	-0.3
2,831,912	-		PfGW456L13_2560	0.49	+0.3
2,831,961	+		PfGW456L13_2560	0.53	-1.4
2,831,961	+		PfGW456L13_2560	0.53	-0.4
2,831,961	+		PfGW456L13_2560	0.53	-0.1
2,831,961	+		PfGW456L13_2560	0.53	+0.8
2,831,962	-		PfGW456L13_2560	0.53	-2.3
2,831,962	-		PfGW456L13_2560	0.53	+0.8
2,831,962	-		PfGW456L13_2560	0.53	+1.2