Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_236 and PfGW456L13_237 are separated by 9 nucleotides PfGW456L13_237 and PfGW456L13_238 overlap by 4 nucleotides PfGW456L13_238 and PfGW456L13_239 overlap by 4 nucleotides PfGW456L13_239 and PfGW456L13_240 are separated by 19 nucleotides PfGW456L13_240 and PfGW456L13_241 overlap by 4 nucleotides
PfGW456L13_236 - Acyl carrier protein (ACP1), at 281,307 to 281,582
_236
PfGW456L13_237 - Acyl carrier protein, at 281,592 to 281,846
_237
PfGW456L13_238 - FIG017861: hypothetical protein, at 281,843 to 282,388
_238
PfGW456L13_239 - FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase (EC 4.2.1.-), at 282,385 to 284,064
_239
PfGW456L13_240 - FIG143263: Glycosyl transferase, at 284,084 to 284,791
_240
PfGW456L13_241 - Lysophospholipid acyltransferase, at 284,788 to 285,729
_241
Position (kb) 282
283
284
285 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 281.484 kb on + strand, within PfGW456L13_236 at 281.485 kb on - strand, within PfGW456L13_236 at 281.535 kb on - strand, within PfGW456L13_236 at 281.689 kb on - strand, within PfGW456L13_237 at 281.877 kb on + strand at 281.877 kb on + strand at 281.878 kb on - strand at 281.878 kb on - strand at 281.889 kb on - strand at 281.903 kb on + strand, within PfGW456L13_238 at 281.903 kb on + strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.202 kb on + strand, within PfGW456L13_238 at 282.303 kb on - strand, within PfGW456L13_238 at 282.303 kb on - strand, within PfGW456L13_238 at 282.330 kb on + strand, within PfGW456L13_238 at 282.330 kb on + strand, within PfGW456L13_238 at 282.331 kb on - strand, within PfGW456L13_238 at 282.360 kb on + strand at 282.360 kb on + strand at 282.361 kb on - strand at 282.366 kb on + strand at 282.372 kb on + strand at 282.373 kb on - strand at 282.396 kb on - strand at 282.745 kb on - strand, within PfGW456L13_239 at 282.745 kb on - strand, within PfGW456L13_239 at 282.907 kb on + strand, within PfGW456L13_239 at 282.907 kb on + strand, within PfGW456L13_239 at 282.907 kb on + strand, within PfGW456L13_239 at 282.908 kb on - strand, within PfGW456L13_239 at 283.297 kb on + strand, within PfGW456L13_239 at 283.297 kb on + strand, within PfGW456L13_239 at 283.297 kb on + strand, within PfGW456L13_239 at 283.298 kb on - strand, within PfGW456L13_239 at 283.301 kb on + strand, within PfGW456L13_239 at 283.795 kb on + strand, within PfGW456L13_239 at 283.796 kb on - strand, within PfGW456L13_239 at 283.796 kb on - strand, within PfGW456L13_239 at 283.969 kb on + strand at 283.993 kb on + strand at 283.994 kb on - strand at 283.994 kb on - strand at 284.063 kb on - strand at 284.087 kb on + strand at 284.087 kb on + strand at 284.087 kb on + strand at 284.087 kb on + strand at 284.087 kb on + strand at 284.088 kb on - strand at 284.088 kb on - strand at 284.088 kb on - strand at 284.414 kb on + strand, within PfGW456L13_240 at 284.444 kb on + strand, within PfGW456L13_240 at 284.445 kb on - strand, within PfGW456L13_240 at 284.445 kb on - strand, within PfGW456L13_240 at 284.453 kb on + strand, within PfGW456L13_240 at 284.889 kb on - strand, within PfGW456L13_241 at 284.905 kb on + strand, within PfGW456L13_241 at 284.906 kb on - strand, within PfGW456L13_241 at 284.965 kb on + strand, within PfGW456L13_241 at 284.966 kb on - strand, within PfGW456L13_241
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 281,484 + PfGW456L13_236 0.64 +0.2 281,485 - PfGW456L13_236 0.64 -0.5 281,535 - PfGW456L13_236 0.83 +0.9 281,689 - PfGW456L13_237 0.38 -0.4 281,877 + -1.1 281,877 + -2.6 281,878 - +0.3 281,878 - -0.2 281,889 - -1.1 281,903 + PfGW456L13_238 0.11 -0.1 281,903 + PfGW456L13_238 0.11 -0.5 282,201 - PfGW456L13_238 0.66 -1.0 282,201 - PfGW456L13_238 0.66 +1.1 282,201 - PfGW456L13_238 0.66 +0.6 282,201 - PfGW456L13_238 0.66 +0.3 282,202 + PfGW456L13_238 0.66 +0.3 282,303 - PfGW456L13_238 0.84 -1.8 282,303 - PfGW456L13_238 0.84 +0.6 282,330 + PfGW456L13_238 0.89 -0.2 282,330 + PfGW456L13_238 0.89 -1.4 282,331 - PfGW456L13_238 0.89 +0.5 282,360 + +0.2 282,360 + -1.6 282,361 - +1.0 282,366 + -0.2 282,372 + +1.9 282,373 - -2.7 282,396 - +1.0 282,745 - PfGW456L13_239 0.21 +1.2 282,745 - PfGW456L13_239 0.21 -1.4 282,907 + PfGW456L13_239 0.31 -1.4 282,907 + PfGW456L13_239 0.31 -0.5 282,907 + PfGW456L13_239 0.31 -0.5 282,908 - PfGW456L13_239 0.31 -1.4 283,297 + PfGW456L13_239 0.54 -0.9 283,297 + PfGW456L13_239 0.54 +0.0 283,297 + PfGW456L13_239 0.54 -0.9 283,298 - PfGW456L13_239 0.54 -1.2 283,301 + PfGW456L13_239 0.55 -3.3 283,795 + PfGW456L13_239 0.84 +1.0 283,796 - PfGW456L13_239 0.84 -1.1 283,796 - PfGW456L13_239 0.84 +0.3 283,969 + -1.5 283,993 + -2.1 283,994 - -0.0 283,994 - -0.4 284,063 - -0.4 284,087 + -0.4 284,087 + +0.2 284,087 + -1.0 284,087 + -0.5 284,087 + -0.6 284,088 - +0.7 284,088 - -1.8 284,088 - +0.2 284,414 + PfGW456L13_240 0.47 +0.1 284,444 + PfGW456L13_240 0.51 -2.0 284,445 - PfGW456L13_240 0.51 +0.3 284,445 - PfGW456L13_240 0.51 +0.2 284,453 + PfGW456L13_240 0.52 -0.1 284,889 - PfGW456L13_241 0.11 -0.2 284,905 + PfGW456L13_241 0.12 -1.1 284,906 - PfGW456L13_241 0.13 +0.9 284,965 + PfGW456L13_241 0.19 +0.0 284,966 - PfGW456L13_241 0.19 -0.0
Or see this region's nucleotide sequence