Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2053 and PfGW456L13_2054 are separated by 8 nucleotides PfGW456L13_2054 and PfGW456L13_2055 are separated by 69 nucleotides PfGW456L13_2055 and PfGW456L13_2056 are separated by 213 nucleotides
PfGW456L13_2053 - Glutathione S-transferase (EC 2.5.1.18), at 2,256,136 to 2,256,795
_2053
PfGW456L13_2054 - Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit, at 2,256,804 to 2,257,610
_2054
PfGW456L13_2055 - Putative membrane protein, at 2,257,680 to 2,258,735
_2055
PfGW456L13_2056 - Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23), at 2,258,949 to 2,259,647
_2056
Position (kb)
2257
2258
2259 Strain fitness (log2 ratio)
-2
-1
0
1 at 2256.759 kb on + strand at 2256.760 kb on - strand at 2256.763 kb on - strand at 2256.763 kb on - strand at 2256.799 kb on + strand at 2256.799 kb on + strand at 2256.850 kb on + strand at 2256.954 kb on + strand, within PfGW456L13_2054 at 2256.955 kb on - strand, within PfGW456L13_2054 at 2256.955 kb on - strand, within PfGW456L13_2054 at 2257.041 kb on + strand, within PfGW456L13_2054 at 2257.042 kb on - strand, within PfGW456L13_2054 at 2257.049 kb on - strand, within PfGW456L13_2054 at 2257.197 kb on + strand, within PfGW456L13_2054 at 2257.221 kb on + strand, within PfGW456L13_2054 at 2257.221 kb on + strand, within PfGW456L13_2054 at 2257.222 kb on - strand, within PfGW456L13_2054 at 2257.222 kb on - strand, within PfGW456L13_2054 at 2257.222 kb on - strand, within PfGW456L13_2054 at 2257.222 kb on - strand, within PfGW456L13_2054 at 2257.272 kb on + strand, within PfGW456L13_2054 at 2257.273 kb on - strand, within PfGW456L13_2054 at 2257.302 kb on + strand, within PfGW456L13_2054 at 2257.303 kb on - strand, within PfGW456L13_2054 at 2257.303 kb on - strand, within PfGW456L13_2054 at 2257.600 kb on + strand at 2257.630 kb on + strand at 2257.630 kb on + strand at 2257.630 kb on + strand at 2257.631 kb on - strand at 2257.631 kb on - strand at 2257.951 kb on + strand, within PfGW456L13_2055 at 2258.051 kb on + strand, within PfGW456L13_2055 at 2258.052 kb on - strand, within PfGW456L13_2055 at 2258.052 kb on - strand, within PfGW456L13_2055 at 2258.094 kb on + strand, within PfGW456L13_2055 at 2258.094 kb on + strand at 2258.094 kb on + strand, within PfGW456L13_2055 at 2258.095 kb on - strand, within PfGW456L13_2055 at 2258.111 kb on + strand, within PfGW456L13_2055 at 2258.193 kb on + strand, within PfGW456L13_2055 at 2258.193 kb on + strand, within PfGW456L13_2055 at 2258.193 kb on + strand, within PfGW456L13_2055 at 2258.225 kb on - strand, within PfGW456L13_2055 at 2258.225 kb on - strand, within PfGW456L13_2055 at 2258.225 kb on - strand, within PfGW456L13_2055 at 2258.265 kb on + strand, within PfGW456L13_2055 at 2258.265 kb on + strand, within PfGW456L13_2055 at 2258.265 kb on + strand, within PfGW456L13_2055 at 2258.268 kb on + strand, within PfGW456L13_2055 at 2258.268 kb on + strand, within PfGW456L13_2055 at 2258.268 kb on + strand, within PfGW456L13_2055 at 2258.268 kb on + strand, within PfGW456L13_2055 at 2258.268 kb on + strand, within PfGW456L13_2055 at 2258.268 kb on + strand, within PfGW456L13_2055 at 2258.268 kb on + strand, within PfGW456L13_2055 at 2258.269 kb on - strand, within PfGW456L13_2055 at 2258.269 kb on - strand, within PfGW456L13_2055 at 2258.269 kb on - strand, within PfGW456L13_2055 at 2258.269 kb on - strand, within PfGW456L13_2055 at 2258.269 kb on - strand, within PfGW456L13_2055 at 2258.269 kb on - strand, within PfGW456L13_2055 at 2258.269 kb on - strand, within PfGW456L13_2055 at 2258.497 kb on + strand, within PfGW456L13_2055 at 2258.498 kb on - strand, within PfGW456L13_2055 at 2258.498 kb on - strand, within PfGW456L13_2055 at 2258.498 kb on - strand, within PfGW456L13_2055 at 2258.498 kb on - strand, within PfGW456L13_2055 at 2258.498 kb on - strand, within PfGW456L13_2055 at 2258.676 kb on + strand at 2258.676 kb on + strand at 2258.677 kb on - strand at 2258.844 kb on + strand at 2258.844 kb on + strand at 2258.845 kb on - strand at 2258.910 kb on - strand at 2259.645 kb on + strand at 2259.646 kb on - strand at 2259.655 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 2,256,759 + +1.1 2,256,760 - -0.0 2,256,763 - -0.4 2,256,763 - -1.4 2,256,799 + +0.9 2,256,799 + -0.9 2,256,850 + +0.6 2,256,954 + PfGW456L13_2054 0.19 +0.7 2,256,955 - PfGW456L13_2054 0.19 -0.1 2,256,955 - PfGW456L13_2054 0.19 +1.0 2,257,041 + PfGW456L13_2054 0.29 +0.7 2,257,042 - PfGW456L13_2054 0.29 +1.0 2,257,049 - PfGW456L13_2054 0.30 -0.1 2,257,197 + PfGW456L13_2054 0.49 +1.1 2,257,221 + PfGW456L13_2054 0.52 +0.3 2,257,221 + PfGW456L13_2054 0.52 +0.8 2,257,222 - PfGW456L13_2054 0.52 +1.5 2,257,222 - PfGW456L13_2054 0.52 -1.0 2,257,222 - PfGW456L13_2054 0.52 +0.4 2,257,222 - PfGW456L13_2054 0.52 +0.5 2,257,272 + PfGW456L13_2054 0.58 +0.3 2,257,273 - PfGW456L13_2054 0.58 -0.5 2,257,302 + PfGW456L13_2054 0.62 -0.0 2,257,303 - PfGW456L13_2054 0.62 +0.3 2,257,303 - PfGW456L13_2054 0.62 +1.1 2,257,600 + -1.2 2,257,630 + -0.8 2,257,630 + +0.1 2,257,630 + +0.8 2,257,631 - -0.3 2,257,631 - -0.6 2,257,951 + PfGW456L13_2055 0.26 +0.1 2,258,051 + PfGW456L13_2055 0.35 +0.2 2,258,052 - PfGW456L13_2055 0.35 -1.0 2,258,052 - PfGW456L13_2055 0.35 -1.5 2,258,094 + PfGW456L13_2055 0.39 +0.0 2,258,094 + +0.1 2,258,094 + PfGW456L13_2055 0.39 +0.9 2,258,095 - PfGW456L13_2055 0.39 -0.6 2,258,111 + PfGW456L13_2055 0.41 -2.0 2,258,193 + PfGW456L13_2055 0.49 +0.9 2,258,193 + PfGW456L13_2055 0.49 +1.3 2,258,193 + PfGW456L13_2055 0.49 -0.1 2,258,225 - PfGW456L13_2055 0.52 +0.8 2,258,225 - PfGW456L13_2055 0.52 +0.2 2,258,225 - PfGW456L13_2055 0.52 -0.3 2,258,265 + PfGW456L13_2055 0.55 +0.9 2,258,265 + PfGW456L13_2055 0.55 -0.8 2,258,265 + PfGW456L13_2055 0.55 -1.3 2,258,268 + PfGW456L13_2055 0.56 -1.1 2,258,268 + PfGW456L13_2055 0.56 -0.2 2,258,268 + PfGW456L13_2055 0.56 +0.3 2,258,268 + PfGW456L13_2055 0.56 -1.3 2,258,268 + PfGW456L13_2055 0.56 -0.1 2,258,268 + PfGW456L13_2055 0.56 +0.6 2,258,268 + PfGW456L13_2055 0.56 -1.7 2,258,269 - PfGW456L13_2055 0.56 +0.5 2,258,269 - PfGW456L13_2055 0.56 +0.3 2,258,269 - PfGW456L13_2055 0.56 -1.6 2,258,269 - PfGW456L13_2055 0.56 +0.3 2,258,269 - PfGW456L13_2055 0.56 -0.2 2,258,269 - PfGW456L13_2055 0.56 -0.6 2,258,269 - PfGW456L13_2055 0.56 +0.4 2,258,497 + PfGW456L13_2055 0.77 +1.3 2,258,498 - PfGW456L13_2055 0.77 +1.1 2,258,498 - PfGW456L13_2055 0.77 -0.9 2,258,498 - PfGW456L13_2055 0.77 -0.5 2,258,498 - PfGW456L13_2055 0.77 -1.7 2,258,498 - PfGW456L13_2055 0.77 +0.5 2,258,676 + -1.9 2,258,676 + -1.0 2,258,677 - -1.5 2,258,844 + +1.2 2,258,844 + -0.2 2,258,845 - +0.1 2,258,910 - +0.6 2,259,645 + -1.5 2,259,646 - +0.6 2,259,655 + -0.1
Or see this region's nucleotide sequence