Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_171 and PfGW456L13_172 are separated by 128 nucleotides PfGW456L13_172 and PfGW456L13_173 are separated by 135 nucleotides
PfGW456L13_171 - Phosphatidylserine decarboxylase (EC 4.1.1.65), at 195,436 to 196,296
_171
PfGW456L13_172 - Phosphoserine phosphatase (EC 3.1.3.3), at 196,425 to 197,639
_172
PfGW456L13_173 - HAMP domain protein, at 197,775 to 199,292
_173
Position (kb) 196
197
198 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.307 kb on + strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.308 kb on - strand at 196.314 kb on - strand at 196.407 kb on + strand at 196.408 kb on - strand at 196.408 kb on - strand at 196.408 kb on - strand at 196.408 kb on - strand at 196.408 kb on - strand at 196.408 kb on - strand at 196.426 kb on + strand at 196.427 kb on - strand at 196.462 kb on + strand at 196.462 kb on + strand at 196.462 kb on + strand at 196.462 kb on + strand at 196.735 kb on + strand, within PfGW456L13_172 at 196.735 kb on + strand, within PfGW456L13_172 at 196.735 kb on + strand, within PfGW456L13_172 at 196.736 kb on - strand, within PfGW456L13_172 at 196.736 kb on - strand, within PfGW456L13_172 at 196.736 kb on - strand, within PfGW456L13_172 at 196.736 kb on - strand, within PfGW456L13_172 at 196.774 kb on + strand, within PfGW456L13_172 at 196.774 kb on + strand, within PfGW456L13_172 at 196.774 kb on + strand, within PfGW456L13_172 at 196.774 kb on + strand, within PfGW456L13_172 at 196.775 kb on - strand, within PfGW456L13_172 at 196.775 kb on - strand, within PfGW456L13_172 at 196.808 kb on - strand, within PfGW456L13_172 at 196.808 kb on - strand, within PfGW456L13_172 at 196.808 kb on - strand, within PfGW456L13_172 at 197.275 kb on + strand, within PfGW456L13_172 at 197.275 kb on + strand, within PfGW456L13_172 at 197.276 kb on - strand, within PfGW456L13_172 at 197.383 kb on + strand, within PfGW456L13_172 at 197.384 kb on - strand, within PfGW456L13_172 at 197.431 kb on + strand, within PfGW456L13_172 at 197.432 kb on - strand, within PfGW456L13_172 at 197.432 kb on - strand, within PfGW456L13_172 at 197.619 kb on + strand at 197.674 kb on + strand at 197.674 kb on + strand at 197.675 kb on - strand at 197.675 kb on - strand at 197.733 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 196,307 + -0.9 196,307 + +1.4 196,307 + +1.0 196,307 + -0.5 196,307 + -0.3 196,307 + -0.1 196,307 + +0.5 196,307 + -1.2 196,307 + +0.4 196,307 + -0.4 196,307 + +0.2 196,308 - -0.3 196,308 - +0.5 196,308 - +0.1 196,308 - +0.8 196,308 - -0.1 196,308 - +1.0 196,308 - +1.3 196,308 - +0.7 196,308 - -0.9 196,308 - -0.1 196,308 - -1.9 196,308 - -1.1 196,308 - +0.5 196,308 - -1.7 196,308 - +0.2 196,314 - +0.3 196,407 + +1.4 196,408 - -0.7 196,408 - +0.3 196,408 - +0.5 196,408 - -2.8 196,408 - -0.4 196,408 - -1.3 196,426 + +2.6 196,427 - -0.8 196,462 + -1.1 196,462 + -0.0 196,462 + -1.8 196,462 + +0.5 196,735 + PfGW456L13_172 0.26 -0.6 196,735 + PfGW456L13_172 0.26 -1.6 196,735 + PfGW456L13_172 0.26 -0.1 196,736 - PfGW456L13_172 0.26 -1.8 196,736 - PfGW456L13_172 0.26 -0.2 196,736 - PfGW456L13_172 0.26 -2.0 196,736 - PfGW456L13_172 0.26 -1.4 196,774 + PfGW456L13_172 0.29 -3.0 196,774 + PfGW456L13_172 0.29 -0.6 196,774 + PfGW456L13_172 0.29 -2.0 196,774 + PfGW456L13_172 0.29 -0.1 196,775 - PfGW456L13_172 0.29 -2.5 196,775 - PfGW456L13_172 0.29 -0.3 196,808 - PfGW456L13_172 0.32 +1.1 196,808 - PfGW456L13_172 0.32 -0.5 196,808 - PfGW456L13_172 0.32 -0.4 197,275 + PfGW456L13_172 0.70 -2.9 197,275 + PfGW456L13_172 0.70 -1.3 197,276 - PfGW456L13_172 0.70 -0.7 197,383 + PfGW456L13_172 0.79 -0.4 197,384 - PfGW456L13_172 0.79 -0.8 197,431 + PfGW456L13_172 0.83 -1.2 197,432 - PfGW456L13_172 0.83 +1.0 197,432 - PfGW456L13_172 0.83 -0.8 197,619 + -0.1 197,674 + -0.5 197,674 + -0.4 197,675 - +0.3 197,675 - -3.2 197,733 + +1.0
Or see this region's nucleotide sequence