Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_143 and PfGW456L13_144 overlap by 4 nucleotides PfGW456L13_144 and PfGW456L13_5158 are separated by 225 nucleotides PfGW456L13_5158 and PfGW456L13_5159 are separated by 170 nucleotides PfGW456L13_5159 and PfGW456L13_145 are separated by 276 nucleotides
PfGW456L13_143 - 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-), at 163,298 to 164,065
_143
PfGW456L13_144 - 3'-to-5' exoribonuclease RNase R, at 164,062 to 166,689
_144
PfGW456L13_5158 - tRNA-Leu-CAG, at 166,915 to 166,998
_5158
PfGW456L13_5159 - tRNA-Leu-CAG, at 167,169 to 167,252
_5159
PfGW456L13_145 - Ferric iron ABC transporter, iron-binding protein, at 167,529 to 168,539
_145
Position (kb)
164
165
166
167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 163.142 kb on + strand at 163.143 kb on - strand at 163.154 kb on - strand at 163.182 kb on + strand at 163.183 kb on - strand at 163.237 kb on + strand at 163.237 kb on + strand at 163.237 kb on + strand at 163.238 kb on - strand at 163.238 kb on - strand at 163.250 kb on + strand at 163.250 kb on + strand at 163.426 kb on - strand, within PfGW456L13_143 at 163.512 kb on + strand, within PfGW456L13_143 at 163.513 kb on - strand, within PfGW456L13_143 at 163.513 kb on - strand, within PfGW456L13_143 at 163.865 kb on + strand, within PfGW456L13_143 at 163.865 kb on + strand, within PfGW456L13_143 at 163.865 kb on + strand, within PfGW456L13_143 at 163.865 kb on + strand, within PfGW456L13_143 at 163.866 kb on - strand, within PfGW456L13_143 at 164.027 kb on + strand at 164.027 kb on + strand at 164.027 kb on + strand at 164.028 kb on - strand at 164.028 kb on - strand at 164.028 kb on - strand at 164.036 kb on + strand at 164.036 kb on + strand at 164.036 kb on + strand at 164.036 kb on + strand at 164.036 kb on + strand at 164.036 kb on + strand at 164.036 kb on + strand at 164.037 kb on - strand at 164.037 kb on - strand at 164.037 kb on - strand at 164.037 kb on - strand at 164.037 kb on - strand at 164.037 kb on - strand at 164.037 kb on - strand at 164.037 kb on - strand at 164.043 kb on + strand at 164.043 kb on + strand at 164.043 kb on + strand at 164.043 kb on + strand at 164.044 kb on - strand at 164.044 kb on - strand at 164.044 kb on - strand at 164.077 kb on - strand at 164.134 kb on - strand at 164.317 kb on + strand at 164.317 kb on + strand at 164.317 kb on + strand at 164.318 kb on - strand at 164.577 kb on - strand, within PfGW456L13_144 at 164.577 kb on - strand, within PfGW456L13_144 at 164.579 kb on + strand, within PfGW456L13_144 at 164.621 kb on + strand, within PfGW456L13_144 at 164.621 kb on + strand, within PfGW456L13_144 at 164.621 kb on + strand, within PfGW456L13_144 at 164.621 kb on + strand, within PfGW456L13_144 at 164.625 kb on + strand, within PfGW456L13_144 at 164.626 kb on - strand, within PfGW456L13_144 at 164.731 kb on + strand, within PfGW456L13_144 at 164.731 kb on + strand, within PfGW456L13_144 at 164.731 kb on + strand, within PfGW456L13_144 at 164.731 kb on + strand, within PfGW456L13_144 at 164.732 kb on - strand, within PfGW456L13_144 at 164.732 kb on - strand, within PfGW456L13_144 at 164.732 kb on - strand, within PfGW456L13_144 at 164.954 kb on + strand, within PfGW456L13_144 at 165.376 kb on + strand, within PfGW456L13_144 at 165.447 kb on - strand, within PfGW456L13_144 at 165.513 kb on - strand, within PfGW456L13_144 at 166.028 kb on + strand, within PfGW456L13_144 at 166.028 kb on + strand, within PfGW456L13_144 at 166.029 kb on - strand, within PfGW456L13_144 at 166.451 kb on + strand at 166.451 kb on + strand at 166.452 kb on - strand at 166.452 kb on - strand at 166.452 kb on - strand at 166.452 kb on - strand at 166.469 kb on + strand at 166.470 kb on - strand at 166.470 kb on - strand at 166.470 kb on - strand at 166.470 kb on - strand at 166.470 kb on - strand at 166.710 kb on + strand at 166.710 kb on + strand at 166.712 kb on + strand at 166.731 kb on + strand at 166.737 kb on + strand at 166.760 kb on + strand at 166.760 kb on + strand at 166.760 kb on + strand at 166.763 kb on + strand at 166.763 kb on + strand at 166.763 kb on + strand at 166.763 kb on + strand at 166.763 kb on + strand at 166.763 kb on + strand at 166.774 kb on + strand at 166.774 kb on + strand at 166.774 kb on + strand at 166.774 kb on + strand at 166.874 kb on + strand at 167.018 kb on + strand at 167.084 kb on + strand at 167.085 kb on - strand at 167.130 kb on + strand at 167.131 kb on - strand at 167.350 kb on + strand at 167.350 kb on + strand at 167.350 kb on + strand at 167.351 kb on - strand at 167.351 kb on - strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.377 kb on + strand at 167.378 kb on - strand at 167.378 kb on - strand at 167.378 kb on - strand at 167.378 kb on - strand at 167.378 kb on - strand at 167.378 kb on - strand at 167.378 kb on - strand at 167.378 kb on - strand at 167.453 kb on + strand at 167.543 kb on + strand at 167.543 kb on + strand at 167.544 kb on - strand at 167.634 kb on + strand, within PfGW456L13_145 at 167.634 kb on + strand, within PfGW456L13_145 at 167.634 kb on + strand, within PfGW456L13_145 at 167.635 kb on - strand, within PfGW456L13_145
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 163,142 + +0.1 163,143 - +0.5 163,154 - +0.5 163,182 + -0.5 163,183 - -0.5 163,237 + -0.5 163,237 + +1.0 163,237 + -1.4 163,238 - -0.3 163,238 - -0.4 163,250 + +0.7 163,250 + +0.3 163,426 - PfGW456L13_143 0.17 -2.1 163,512 + PfGW456L13_143 0.28 -0.2 163,513 - PfGW456L13_143 0.28 +1.1 163,513 - PfGW456L13_143 0.28 +1.0 163,865 + PfGW456L13_143 0.74 +0.2 163,865 + PfGW456L13_143 0.74 +0.2 163,865 + PfGW456L13_143 0.74 -0.6 163,865 + PfGW456L13_143 0.74 +0.2 163,866 - PfGW456L13_143 0.74 +0.8 164,027 + +0.0 164,027 + -0.2 164,027 + +1.3 164,028 - -0.5 164,028 - +1.5 164,028 - +0.4 164,036 + +0.5 164,036 + +0.8 164,036 + +0.3 164,036 + +0.5 164,036 + +0.2 164,036 + -0.0 164,036 + +1.5 164,037 - -0.0 164,037 - -0.0 164,037 - -1.2 164,037 - +1.0 164,037 - +0.5 164,037 - -1.1 164,037 - +0.3 164,037 - -0.6 164,043 + -0.9 164,043 + -0.2 164,043 + -1.8 164,043 + -0.1 164,044 - +1.1 164,044 - -1.1 164,044 - -1.4 164,077 - +0.5 164,134 - -1.9 164,317 + +0.4 164,317 + +0.2 164,317 + +1.8 164,318 - +0.2 164,577 - PfGW456L13_144 0.20 -2.4 164,577 - PfGW456L13_144 0.20 -1.4 164,579 + PfGW456L13_144 0.20 -1.5 164,621 + PfGW456L13_144 0.21 +0.5 164,621 + PfGW456L13_144 0.21 -1.5 164,621 + PfGW456L13_144 0.21 -1.5 164,621 + PfGW456L13_144 0.21 +0.2 164,625 + PfGW456L13_144 0.21 -2.2 164,626 - PfGW456L13_144 0.21 -2.9 164,731 + PfGW456L13_144 0.25 -0.8 164,731 + PfGW456L13_144 0.25 -0.1 164,731 + PfGW456L13_144 0.25 -1.1 164,731 + PfGW456L13_144 0.25 -2.0 164,732 - PfGW456L13_144 0.25 -1.1 164,732 - PfGW456L13_144 0.25 -1.9 164,732 - PfGW456L13_144 0.25 -2.3 164,954 + PfGW456L13_144 0.34 -2.0 165,376 + PfGW456L13_144 0.50 -0.5 165,447 - PfGW456L13_144 0.53 -1.1 165,513 - PfGW456L13_144 0.55 -0.5 166,028 + PfGW456L13_144 0.75 -0.5 166,028 + PfGW456L13_144 0.75 -1.5 166,029 - PfGW456L13_144 0.75 -0.1 166,451 + +1.5 166,451 + -0.9 166,452 - -2.0 166,452 - -0.1 166,452 - -1.5 166,452 - -0.9 166,469 + +1.0 166,470 - -0.5 166,470 - -0.9 166,470 - -1.8 166,470 - -0.7 166,470 - +0.0 166,710 + -0.1 166,710 + +1.0 166,712 + -1.4 166,731 + -0.1 166,737 + -0.3 166,760 + -1.1 166,760 + +1.2 166,760 + +1.4 166,763 + -0.1 166,763 + -0.3 166,763 + -0.5 166,763 + +1.2 166,763 + +0.6 166,763 + -0.2 166,774 + +1.2 166,774 + -1.4 166,774 + -0.4 166,774 + +0.0 166,874 + -0.1 167,018 + -2.8 167,084 + +1.0 167,085 - +0.2 167,130 + +1.2 167,131 - +0.8 167,350 + -2.1 167,350 + +0.3 167,350 + -3.6 167,351 - +0.8 167,351 - -0.1 167,377 + -1.7 167,377 + +0.5 167,377 + +0.2 167,377 + +0.2 167,377 + +1.7 167,377 + -0.4 167,377 + +0.6 167,377 + -0.8 167,377 + +0.3 167,377 + -0.7 167,377 + +0.4 167,378 - -1.2 167,378 - -0.2 167,378 - +1.5 167,378 - -3.4 167,378 - -0.5 167,378 - -0.7 167,378 - -0.3 167,378 - -1.0 167,453 + +1.6 167,543 + -0.5 167,543 + +1.5 167,544 - -0.4 167,634 + PfGW456L13_145 0.10 +0.1 167,634 + PfGW456L13_145 0.10 -0.3 167,634 + PfGW456L13_145 0.10 +1.2 167,635 - PfGW456L13_145 0.10 -0.2
Or see this region's nucleotide sequence