Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0730 and Echvi_0731 are separated by 21 nucleotides Echvi_0731 and Echvi_0732 are separated by 216 nucleotides Echvi_0732 and Echvi_0733 are separated by 54 nucleotides
Echvi_0730: Echvi_0730 - hypothetical protein, at 817,294 to 818,628
_0730
Echvi_0731: Echvi_0731 - Fe-S oxidoreductase, at 818,650 to 819,444
_0731
Echvi_0732: Echvi_0732 - hypothetical protein, at 819,661 to 820,149
_0732
Echvi_0733: Echvi_0733 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 820,204 to 822,126
_0733
Position (kb) 818
819
820 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 819.457 kb on - strand at 819.457 kb on - strand at 819.473 kb on + strand at 819.534 kb on + strand at 819.534 kb on + strand at 819.534 kb on + strand at 819.587 kb on - strand at 819.587 kb on - strand at 819.625 kb on - strand at 819.626 kb on + strand at 819.627 kb on - strand at 819.630 kb on + strand at 819.660 kb on + strand at 819.660 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.664 kb on + strand at 819.665 kb on - strand at 819.665 kb on - strand at 819.665 kb on - strand at 819.666 kb on + strand at 819.707 kb on + strand at 819.707 kb on + strand at 819.708 kb on - strand at 819.708 kb on - strand at 819.708 kb on - strand at 819.708 kb on - strand at 819.709 kb on + strand at 819.709 kb on + strand at 819.709 kb on + strand at 819.709 kb on + strand at 819.751 kb on - strand, within Echvi_0732 at 820.018 kb on + strand, within Echvi_0732 at 820.019 kb on - strand, within Echvi_0732 at 820.060 kb on - strand, within Echvi_0732 at 820.104 kb on - strand at 820.148 kb on - strand at 820.165 kb on + strand at 820.167 kb on + strand at 820.167 kb on + strand at 820.167 kb on + strand at 820.167 kb on + strand at 820.167 kb on + strand at 820.170 kb on + strand at 820.170 kb on + strand at 820.179 kb on + strand at 820.179 kb on + strand at 820.179 kb on + strand at 820.179 kb on + strand at 820.183 kb on + strand at 820.183 kb on + strand at 820.185 kb on + strand at 820.203 kb on + strand at 820.204 kb on - strand at 820.237 kb on - strand at 820.254 kb on - strand at 820.260 kb on + strand at 820.260 kb on + strand at 820.307 kb on - strand at 820.337 kb on + strand at 820.337 kb on + strand at 820.372 kb on + strand at 820.372 kb on + strand at 820.372 kb on + strand at 820.372 kb on + strand at 820.373 kb on - strand at 820.373 kb on - strand at 820.376 kb on - strand at 820.376 kb on - strand at 820.426 kb on + strand, within Echvi_0733 at 820.427 kb on - strand, within Echvi_0733 at 820.429 kb on + strand, within Echvi_0733 at 820.430 kb on - strand, within Echvi_0733 at 820.430 kb on - strand, within Echvi_0733 at 820.430 kb on - strand, within Echvi_0733 at 820.430 kb on - strand, within Echvi_0733 at 820.435 kb on - strand, within Echvi_0733 at 820.435 kb on - strand, within Echvi_0733 at 820.435 kb on - strand, within Echvi_0733 at 820.435 kb on - strand, within Echvi_0733
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 819,457 - -0.2 819,457 - +1.4 819,473 + +2.5 819,534 + +0.6 819,534 + +1.0 819,534 + +0.3 819,587 - -1.8 819,587 - +0.0 819,625 - -2.3 819,626 + -2.2 819,627 - -1.2 819,630 + -0.6 819,660 + +0.5 819,660 + +0.8 819,664 + -1.4 819,664 + -1.0 819,664 + -0.8 819,664 + +0.3 819,664 + -0.0 819,664 + +1.5 819,664 + +0.1 819,664 + +0.2 819,664 + -0.0 819,664 + -0.8 819,665 - +0.4 819,665 - +0.3 819,665 - -0.0 819,666 + -0.0 819,707 + +0.8 819,707 + -0.8 819,708 - +1.0 819,708 - -0.5 819,708 - +1.1 819,708 - -0.3 819,709 + -0.2 819,709 + +0.3 819,709 + +0.0 819,709 + +0.6 819,751 - Echvi_0732 0.18 -1.2 820,018 + Echvi_0732 0.73 +0.3 820,019 - Echvi_0732 0.73 -2.4 820,060 - Echvi_0732 0.82 +0.3 820,104 - +0.1 820,148 - -1.8 820,165 + -0.1 820,167 + -1.1 820,167 + -1.1 820,167 + -0.0 820,167 + -0.2 820,167 + +0.2 820,170 + -1.1 820,170 + +0.4 820,179 + -0.8 820,179 + -0.3 820,179 + +0.6 820,179 + +1.1 820,183 + +0.2 820,183 + -0.2 820,185 + -0.6 820,203 + -0.7 820,204 - +0.5 820,237 - +0.7 820,254 - +0.8 820,260 + +1.8 820,260 + +0.9 820,307 - +0.2 820,337 + +2.8 820,337 + +0.5 820,372 + +0.8 820,372 + -1.1 820,372 + +0.3 820,372 + +1.5 820,373 - +1.7 820,373 - +1.3 820,376 - -0.2 820,376 - +0.7 820,426 + Echvi_0733 0.12 +0.8 820,427 - Echvi_0733 0.12 +0.4 820,429 + Echvi_0733 0.12 +1.1 820,430 - Echvi_0733 0.12 +0.7 820,430 - Echvi_0733 0.12 +0.7 820,430 - Echvi_0733 0.12 +0.7 820,430 - Echvi_0733 0.12 -1.2 820,435 - Echvi_0733 0.12 +0.4 820,435 - Echvi_0733 0.12 +1.2 820,435 - Echvi_0733 0.12 +0.0 820,435 - Echvi_0733 0.12 +1.1
Or see this region's nucleotide sequence