Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20530 and CA264_20535 are separated by 48 nucleotides CA264_20535 and CA264_20540 are separated by 193 nucleotides CA264_20540 and CA264_20545 are separated by 79 nucleotides
CA264_20530: CA264_20530 - hypothetical protein, at 4,729,800 to 4,730,687
_20530
CA264_20535: CA264_20535 - hypothetical protein, at 4,730,736 to 4,731,239
_20535
CA264_20540: CA264_20540 - transglycosylase, at 4,731,433 to 4,733,763
_20540
CA264_20545: CA264_20545 - epimerase, at 4,733,843 to 4,734,760
_20545
Position (kb)
4731
4732
4733
4734 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4730.488 kb on + strand, within CA264_20530 at 4730.715 kb on + strand at 4730.716 kb on - strand at 4730.729 kb on + strand at 4730.730 kb on - strand at 4730.790 kb on - strand, within CA264_20535 at 4731.082 kb on - strand, within CA264_20535 at 4731.094 kb on - strand, within CA264_20535 at 4731.131 kb on + strand, within CA264_20535 at 4731.133 kb on + strand, within CA264_20535 at 4731.133 kb on + strand, within CA264_20535 at 4731.134 kb on - strand, within CA264_20535 at 4731.157 kb on + strand, within CA264_20535 at 4731.276 kb on + strand at 4731.278 kb on + strand at 4731.339 kb on - strand at 4731.339 kb on - strand at 4731.394 kb on + strand at 4731.542 kb on - strand at 4731.559 kb on + strand at 4731.559 kb on + strand at 4731.559 kb on + strand at 4731.560 kb on - strand at 4731.571 kb on + strand at 4731.572 kb on - strand at 4731.708 kb on + strand, within CA264_20540 at 4731.708 kb on + strand, within CA264_20540 at 4731.709 kb on - strand, within CA264_20540 at 4731.736 kb on - strand, within CA264_20540 at 4731.753 kb on - strand, within CA264_20540 at 4731.806 kb on - strand, within CA264_20540 at 4731.847 kb on - strand, within CA264_20540 at 4731.847 kb on - strand, within CA264_20540 at 4731.872 kb on - strand, within CA264_20540 at 4731.924 kb on + strand, within CA264_20540 at 4732.009 kb on + strand, within CA264_20540 at 4732.010 kb on - strand, within CA264_20540 at 4732.094 kb on + strand, within CA264_20540 at 4732.095 kb on - strand, within CA264_20540 at 4732.144 kb on + strand, within CA264_20540 at 4732.147 kb on + strand, within CA264_20540 at 4732.148 kb on - strand, within CA264_20540 at 4732.162 kb on - strand, within CA264_20540 at 4732.212 kb on - strand, within CA264_20540 at 4732.216 kb on + strand, within CA264_20540 at 4732.217 kb on - strand, within CA264_20540 at 4732.217 kb on - strand, within CA264_20540 at 4732.222 kb on + strand, within CA264_20540 at 4732.222 kb on + strand, within CA264_20540 at 4732.277 kb on - strand, within CA264_20540 at 4732.294 kb on + strand, within CA264_20540 at 4732.295 kb on - strand, within CA264_20540 at 4732.389 kb on - strand, within CA264_20540 at 4732.540 kb on - strand, within CA264_20540 at 4732.654 kb on - strand, within CA264_20540 at 4732.715 kb on - strand, within CA264_20540 at 4732.717 kb on + strand, within CA264_20540 at 4732.717 kb on + strand, within CA264_20540 at 4732.717 kb on + strand, within CA264_20540 at 4732.770 kb on + strand, within CA264_20540 at 4732.804 kb on + strand, within CA264_20540 at 4732.810 kb on - strand at 4732.814 kb on - strand, within CA264_20540 at 4732.858 kb on - strand, within CA264_20540 at 4732.871 kb on - strand, within CA264_20540 at 4732.908 kb on + strand, within CA264_20540 at 4732.939 kb on + strand, within CA264_20540 at 4732.939 kb on + strand, within CA264_20540 at 4732.939 kb on + strand, within CA264_20540 at 4732.940 kb on - strand, within CA264_20540 at 4732.940 kb on - strand, within CA264_20540 at 4732.993 kb on + strand, within CA264_20540 at 4733.007 kb on + strand, within CA264_20540 at 4733.073 kb on - strand, within CA264_20540 at 4733.073 kb on - strand, within CA264_20540 at 4733.073 kb on - strand, within CA264_20540 at 4733.095 kb on + strand, within CA264_20540 at 4733.103 kb on + strand, within CA264_20540 at 4733.108 kb on + strand, within CA264_20540 at 4733.108 kb on + strand, within CA264_20540 at 4733.109 kb on - strand, within CA264_20540 at 4733.191 kb on + strand, within CA264_20540 at 4733.191 kb on + strand, within CA264_20540 at 4733.192 kb on - strand, within CA264_20540 at 4733.229 kb on + strand, within CA264_20540 at 4733.230 kb on - strand, within CA264_20540 at 4733.235 kb on + strand, within CA264_20540 at 4733.461 kb on + strand, within CA264_20540 at 4733.461 kb on + strand, within CA264_20540 at 4733.462 kb on - strand, within CA264_20540 at 4733.556 kb on + strand at 4733.556 kb on + strand at 4733.623 kb on - strand at 4733.623 kb on - strand at 4733.671 kb on - strand at 4733.826 kb on + strand at 4733.828 kb on + strand at 4733.833 kb on + strand at 4733.834 kb on - strand at 4733.839 kb on - strand at 4733.889 kb on + strand at 4733.896 kb on - strand at 4733.957 kb on - strand, within CA264_20545 at 4734.053 kb on - strand, within CA264_20545 at 4734.129 kb on - strand, within CA264_20545 at 4734.171 kb on + strand, within CA264_20545 at 4734.171 kb on + strand, within CA264_20545 at 4734.172 kb on - strand, within CA264_20545 at 4734.172 kb on - strand, within CA264_20545 at 4734.287 kb on + strand, within CA264_20545 at 4734.361 kb on - strand, within CA264_20545 at 4734.437 kb on + strand, within CA264_20545 at 4734.437 kb on + strand, within CA264_20545 at 4734.438 kb on - strand, within CA264_20545 at 4734.542 kb on + strand, within CA264_20545 at 4734.542 kb on + strand, within CA264_20545 at 4734.568 kb on + strand, within CA264_20545 at 4734.568 kb on + strand, within CA264_20545 at 4734.569 kb on - strand, within CA264_20545 at 4734.570 kb on + strand, within CA264_20545 at 4734.570 kb on + strand, within CA264_20545 at 4734.571 kb on - strand, within CA264_20545 at 4734.571 kb on - strand, within CA264_20545 at 4734.599 kb on + strand, within CA264_20545 at 4734.600 kb on - strand, within CA264_20545 at 4734.600 kb on - strand, within CA264_20545 at 4734.602 kb on - strand, within CA264_20545 at 4734.634 kb on + strand, within CA264_20545 at 4734.635 kb on - strand, within CA264_20545 at 4734.720 kb on - strand at 4734.761 kb on - strand at 4734.761 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 4,730,488 + CA264_20530 0.77 +0.7 4,730,715 + +0.3 4,730,716 - -0.2 4,730,729 + +0.6 4,730,730 - -0.0 4,730,790 - CA264_20535 0.11 -0.8 4,731,082 - CA264_20535 0.69 -0.7 4,731,094 - CA264_20535 0.71 +0.1 4,731,131 + CA264_20535 0.78 +0.3 4,731,133 + CA264_20535 0.79 -0.8 4,731,133 + CA264_20535 0.79 +0.2 4,731,134 - CA264_20535 0.79 +0.7 4,731,157 + CA264_20535 0.84 -0.3 4,731,276 + -0.4 4,731,278 + +0.6 4,731,339 - -1.8 4,731,339 - +0.2 4,731,394 + -0.6 4,731,542 - +0.1 4,731,559 + -0.8 4,731,559 + +0.2 4,731,559 + -0.4 4,731,560 - -1.0 4,731,571 + -0.6 4,731,572 - -0.1 4,731,708 + CA264_20540 0.12 -0.2 4,731,708 + CA264_20540 0.12 -0.8 4,731,709 - CA264_20540 0.12 +0.2 4,731,736 - CA264_20540 0.13 +0.7 4,731,753 - CA264_20540 0.14 -1.0 4,731,806 - CA264_20540 0.16 -0.2 4,731,847 - CA264_20540 0.18 -0.4 4,731,847 - CA264_20540 0.18 +1.2 4,731,872 - CA264_20540 0.19 +0.2 4,731,924 + CA264_20540 0.21 +1.8 4,732,009 + CA264_20540 0.25 -0.3 4,732,010 - CA264_20540 0.25 +0.8 4,732,094 + CA264_20540 0.28 +2.6 4,732,095 - CA264_20540 0.28 +1.0 4,732,144 + CA264_20540 0.31 -0.1 4,732,147 + CA264_20540 0.31 +0.0 4,732,148 - CA264_20540 0.31 +1.1 4,732,162 - CA264_20540 0.31 +0.7 4,732,212 - CA264_20540 0.33 -0.4 4,732,216 + CA264_20540 0.34 -0.4 4,732,217 - CA264_20540 0.34 +0.3 4,732,217 - CA264_20540 0.34 +0.9 4,732,222 + CA264_20540 0.34 -1.0 4,732,222 + CA264_20540 0.34 -0.5 4,732,277 - CA264_20540 0.36 +0.2 4,732,294 + CA264_20540 0.37 +3.2 4,732,295 - CA264_20540 0.37 +0.2 4,732,389 - CA264_20540 0.41 -0.8 4,732,540 - CA264_20540 0.47 +0.1 4,732,654 - CA264_20540 0.52 -1.4 4,732,715 - CA264_20540 0.55 -0.5 4,732,717 + CA264_20540 0.55 -0.0 4,732,717 + CA264_20540 0.55 -1.1 4,732,717 + CA264_20540 0.55 -1.6 4,732,770 + CA264_20540 0.57 +0.2 4,732,804 + CA264_20540 0.59 -0.4 4,732,810 - -0.4 4,732,814 - CA264_20540 0.59 -0.1 4,732,858 - CA264_20540 0.61 +2.2 4,732,871 - CA264_20540 0.62 -0.2 4,732,908 + CA264_20540 0.63 -0.2 4,732,939 + CA264_20540 0.65 +0.6 4,732,939 + CA264_20540 0.65 -0.4 4,732,939 + CA264_20540 0.65 +0.6 4,732,940 - CA264_20540 0.65 +1.5 4,732,940 - CA264_20540 0.65 -0.4 4,732,993 + CA264_20540 0.67 +0.2 4,733,007 + CA264_20540 0.68 +0.3 4,733,073 - CA264_20540 0.70 +0.9 4,733,073 - CA264_20540 0.70 +2.2 4,733,073 - CA264_20540 0.70 +0.4 4,733,095 + CA264_20540 0.71 -0.1 4,733,103 + CA264_20540 0.72 -0.2 4,733,108 + CA264_20540 0.72 -0.4 4,733,108 + CA264_20540 0.72 -0.1 4,733,109 - CA264_20540 0.72 +0.2 4,733,191 + CA264_20540 0.75 -1.0 4,733,191 + CA264_20540 0.75 +0.1 4,733,192 - CA264_20540 0.75 +0.2 4,733,229 + CA264_20540 0.77 +1.5 4,733,230 - CA264_20540 0.77 -0.7 4,733,235 + CA264_20540 0.77 -0.1 4,733,461 + CA264_20540 0.87 +0.0 4,733,461 + CA264_20540 0.87 +0.0 4,733,462 - CA264_20540 0.87 +0.5 4,733,556 + -2.0 4,733,556 + -0.4 4,733,623 - -0.5 4,733,623 - +0.8 4,733,671 - +0.5 4,733,826 + +0.1 4,733,828 + -0.3 4,733,833 + +0.6 4,733,834 - -0.3 4,733,839 - +0.3 4,733,889 + +1.8 4,733,896 - -1.1 4,733,957 - CA264_20545 0.12 -0.1 4,734,053 - CA264_20545 0.23 -0.2 4,734,129 - CA264_20545 0.31 -0.4 4,734,171 + CA264_20545 0.36 -0.2 4,734,171 + CA264_20545 0.36 +0.1 4,734,172 - CA264_20545 0.36 +0.6 4,734,172 - CA264_20545 0.36 +1.2 4,734,287 + CA264_20545 0.48 -0.1 4,734,361 - CA264_20545 0.56 -0.7 4,734,437 + CA264_20545 0.65 -0.9 4,734,437 + CA264_20545 0.65 -0.4 4,734,438 - CA264_20545 0.65 +0.9 4,734,542 + CA264_20545 0.76 -1.2 4,734,542 + CA264_20545 0.76 -1.8 4,734,568 + CA264_20545 0.79 -0.6 4,734,568 + CA264_20545 0.79 -0.7 4,734,569 - CA264_20545 0.79 +0.0 4,734,570 + CA264_20545 0.79 +0.2 4,734,570 + CA264_20545 0.79 -0.3 4,734,571 - CA264_20545 0.79 -0.2 4,734,571 - CA264_20545 0.79 -0.4 4,734,599 + CA264_20545 0.82 -0.0 4,734,600 - CA264_20545 0.82 +1.2 4,734,600 - CA264_20545 0.82 +1.2 4,734,602 - CA264_20545 0.83 -0.4 4,734,634 + CA264_20545 0.86 -1.1 4,734,635 - CA264_20545 0.86 +0.2 4,734,720 - -1.8 4,734,761 - -1.2 4,734,761 - -0.1
Or see this region's nucleotide sequence