Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17855 and CA264_17860 are separated by 441 nucleotides CA264_17860 and CA264_17865 are separated by 53 nucleotides
CA264_17855: CA264_17855 - EamA family transporter, at 4,152,014 to 4,152,763
_17855
CA264_17860: CA264_17860 - tRNA dihydrouridine synthase DusB, at 4,153,205 to 4,154,194
_17860
CA264_17865: CA264_17865 - CPBP family intramembrane metalloprotease domain-containing protein, at 4,154,248 to 4,155,213
_17865
Position (kb)
4153
4154
4155 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4152.234 kb on + strand, within CA264_17855 at 4152.234 kb on + strand, within CA264_17855 at 4152.234 kb on + strand, within CA264_17855 at 4152.235 kb on - strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.270 kb on - strand, within CA264_17855 at 4152.270 kb on - strand, within CA264_17855 at 4152.276 kb on + strand, within CA264_17855 at 4152.276 kb on + strand, within CA264_17855 at 4152.321 kb on - strand, within CA264_17855 at 4152.379 kb on + strand, within CA264_17855 at 4152.379 kb on + strand, within CA264_17855 at 4152.379 kb on + strand, within CA264_17855 at 4152.420 kb on - strand, within CA264_17855 at 4152.426 kb on + strand, within CA264_17855 at 4152.426 kb on + strand, within CA264_17855 at 4152.435 kb on + strand, within CA264_17855 at 4152.435 kb on + strand, within CA264_17855 at 4152.436 kb on - strand, within CA264_17855 at 4152.436 kb on - strand, within CA264_17855 at 4152.438 kb on + strand, within CA264_17855 at 4152.439 kb on - strand, within CA264_17855 at 4152.439 kb on - strand, within CA264_17855 at 4152.439 kb on - strand, within CA264_17855 at 4152.479 kb on - strand, within CA264_17855 at 4152.592 kb on + strand, within CA264_17855 at 4152.593 kb on - strand, within CA264_17855 at 4152.593 kb on - strand, within CA264_17855 at 4152.593 kb on - strand, within CA264_17855 at 4152.793 kb on - strand at 4152.904 kb on + strand at 4152.905 kb on - strand at 4152.925 kb on - strand at 4152.949 kb on - strand at 4152.949 kb on - strand at 4152.957 kb on - strand at 4153.078 kb on - strand at 4153.335 kb on + strand, within CA264_17860 at 4153.409 kb on + strand, within CA264_17860 at 4153.445 kb on + strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.484 kb on + strand, within CA264_17860 at 4153.537 kb on - strand, within CA264_17860 at 4153.574 kb on + strand, within CA264_17860 at 4153.659 kb on + strand, within CA264_17860 at 4153.660 kb on - strand, within CA264_17860 at 4153.686 kb on - strand, within CA264_17860 at 4153.741 kb on - strand, within CA264_17860 at 4153.802 kb on + strand, within CA264_17860 at 4153.897 kb on - strand, within CA264_17860 at 4154.065 kb on + strand, within CA264_17860 at 4154.082 kb on - strand, within CA264_17860 at 4154.082 kb on - strand, within CA264_17860 at 4154.129 kb on + strand at 4154.129 kb on + strand at 4154.169 kb on - strand at 4154.169 kb on - strand at 4154.174 kb on + strand at 4154.174 kb on + strand at 4154.179 kb on + strand at 4154.190 kb on - strand at 4154.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 4,152,234 + CA264_17855 0.29 -0.3 4,152,234 + CA264_17855 0.29 +0.5 4,152,234 + CA264_17855 0.29 -0.2 4,152,235 - CA264_17855 0.29 +0.8 4,152,269 + CA264_17855 0.34 +1.9 4,152,269 + CA264_17855 0.34 -0.6 4,152,269 + CA264_17855 0.34 +0.2 4,152,269 + CA264_17855 0.34 +1.1 4,152,270 - CA264_17855 0.34 -0.1 4,152,270 - CA264_17855 0.34 +0.4 4,152,276 + CA264_17855 0.35 -0.1 4,152,276 + CA264_17855 0.35 -0.2 4,152,321 - CA264_17855 0.41 -0.1 4,152,379 + CA264_17855 0.49 +1.6 4,152,379 + CA264_17855 0.49 -0.5 4,152,379 + CA264_17855 0.49 -0.4 4,152,420 - CA264_17855 0.54 +0.4 4,152,426 + CA264_17855 0.55 -2.0 4,152,426 + CA264_17855 0.55 -1.1 4,152,435 + CA264_17855 0.56 -0.7 4,152,435 + CA264_17855 0.56 -1.1 4,152,436 - CA264_17855 0.56 -0.4 4,152,436 - CA264_17855 0.56 -1.6 4,152,438 + CA264_17855 0.57 -0.4 4,152,439 - CA264_17855 0.57 +0.6 4,152,439 - CA264_17855 0.57 +0.5 4,152,439 - CA264_17855 0.57 -0.0 4,152,479 - CA264_17855 0.62 +1.0 4,152,592 + CA264_17855 0.77 +0.2 4,152,593 - CA264_17855 0.77 +2.9 4,152,593 - CA264_17855 0.77 -0.1 4,152,593 - CA264_17855 0.77 -1.2 4,152,793 - +0.1 4,152,904 + -2.2 4,152,905 - +0.3 4,152,925 - +1.0 4,152,949 - -1.0 4,152,949 - -1.2 4,152,957 - -1.6 4,153,078 - -0.2 4,153,335 + CA264_17860 0.13 +2.3 4,153,409 + CA264_17860 0.21 -0.5 4,153,445 + CA264_17860 0.24 -0.3 4,153,465 - CA264_17860 0.26 -1.3 4,153,465 - CA264_17860 0.26 -0.3 4,153,465 - CA264_17860 0.26 -1.2 4,153,484 + CA264_17860 0.28 +0.7 4,153,537 - CA264_17860 0.34 -1.5 4,153,574 + CA264_17860 0.37 +0.3 4,153,659 + CA264_17860 0.46 +0.4 4,153,660 - CA264_17860 0.46 -1.5 4,153,686 - CA264_17860 0.49 -0.6 4,153,741 - CA264_17860 0.54 -0.4 4,153,802 + CA264_17860 0.60 +0.3 4,153,897 - CA264_17860 0.70 +0.0 4,154,065 + CA264_17860 0.87 -0.2 4,154,082 - CA264_17860 0.89 -1.9 4,154,082 - CA264_17860 0.89 -1.7 4,154,129 + -1.2 4,154,129 + -0.2 4,154,169 - +0.3 4,154,169 - -2.0 4,154,174 + -1.4 4,154,174 + +0.1 4,154,179 + -1.4 4,154,190 - -1.4 4,154,232 - -0.5
Or see this region's nucleotide sequence