Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14470 and CA264_14475 are separated by 92 nucleotides CA264_14475 and CA264_14480 are separated by 14 nucleotides CA264_14480 and CA264_14485 are separated by 182 nucleotides
CA264_14470: CA264_14470 - hypothetical protein, at 3,397,169 to 3,397,504
_14470
CA264_14475: CA264_14475 - hypothetical protein, at 3,397,597 to 3,398,550
_14475
CA264_14480: CA264_14480 - large-conductance mechanosensitive channel, at 3,398,565 to 3,399,014
_14480
CA264_14485: CA264_14485 - enoyl-CoA hydratase, at 3,399,197 to 3,399,979
_14485
Position (kb)
3397
3398
3399 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3396.648 kb on + strand at 3396.659 kb on + strand at 3396.697 kb on + strand at 3396.727 kb on + strand at 3396.727 kb on + strand at 3396.728 kb on - strand at 3396.729 kb on + strand at 3396.729 kb on + strand at 3396.730 kb on - strand at 3396.730 kb on - strand at 3396.730 kb on - strand at 3396.730 kb on - strand at 3396.733 kb on + strand at 3396.733 kb on + strand at 3396.734 kb on - strand at 3396.780 kb on - strand at 3396.791 kb on - strand at 3396.850 kb on - strand at 3396.879 kb on + strand at 3396.951 kb on + strand at 3397.005 kb on + strand at 3397.090 kb on - strand at 3397.090 kb on - strand at 3397.146 kb on + strand at 3397.147 kb on - strand at 3397.148 kb on + strand at 3397.149 kb on - strand at 3397.149 kb on - strand at 3397.149 kb on - strand at 3397.152 kb on + strand at 3397.153 kb on - strand at 3397.154 kb on + strand at 3397.155 kb on - strand at 3397.160 kb on + strand at 3397.210 kb on + strand, within CA264_14470 at 3397.210 kb on + strand, within CA264_14470 at 3397.211 kb on - strand, within CA264_14470 at 3397.311 kb on + strand, within CA264_14470 at 3397.315 kb on + strand, within CA264_14470 at 3397.316 kb on - strand, within CA264_14470 at 3397.320 kb on + strand, within CA264_14470 at 3397.320 kb on + strand, within CA264_14470 at 3397.353 kb on - strand, within CA264_14470 at 3397.401 kb on + strand, within CA264_14470 at 3397.414 kb on + strand, within CA264_14470 at 3397.415 kb on - strand, within CA264_14470 at 3397.524 kb on + strand at 3397.527 kb on + strand at 3397.529 kb on + strand at 3397.792 kb on + strand, within CA264_14475 at 3397.885 kb on + strand, within CA264_14475 at 3397.932 kb on + strand, within CA264_14475 at 3398.005 kb on + strand, within CA264_14475 at 3398.013 kb on + strand, within CA264_14475 at 3398.014 kb on - strand, within CA264_14475 at 3398.038 kb on - strand, within CA264_14475 at 3398.067 kb on - strand, within CA264_14475 at 3398.186 kb on + strand, within CA264_14475 at 3398.236 kb on - strand, within CA264_14475 at 3398.283 kb on - strand, within CA264_14475 at 3398.286 kb on + strand, within CA264_14475 at 3398.287 kb on - strand, within CA264_14475 at 3398.402 kb on - strand, within CA264_14475 at 3398.511 kb on + strand at 3398.511 kb on + strand at 3398.521 kb on + strand at 3398.522 kb on - strand at 3398.566 kb on + strand at 3398.566 kb on + strand at 3398.567 kb on - strand at 3398.576 kb on + strand at 3398.658 kb on - strand, within CA264_14480 at 3398.709 kb on - strand, within CA264_14480 at 3398.725 kb on - strand, within CA264_14480 at 3398.763 kb on + strand, within CA264_14480 at 3398.776 kb on + strand, within CA264_14480 at 3398.777 kb on - strand, within CA264_14480 at 3398.832 kb on + strand, within CA264_14480 at 3398.852 kb on + strand, within CA264_14480 at 3398.859 kb on + strand, within CA264_14480 at 3398.860 kb on - strand, within CA264_14480 at 3398.891 kb on + strand, within CA264_14480 at 3398.891 kb on + strand, within CA264_14480 at 3398.894 kb on + strand, within CA264_14480 at 3398.895 kb on - strand, within CA264_14480 at 3398.898 kb on - strand, within CA264_14480 at 3399.019 kb on - strand at 3399.027 kb on - strand at 3399.030 kb on + strand at 3399.044 kb on + strand at 3399.121 kb on - strand at 3399.121 kb on - strand at 3399.196 kb on + strand at 3399.251 kb on - strand at 3399.251 kb on - strand at 3399.251 kb on - strand at 3399.275 kb on - strand at 3399.295 kb on + strand, within CA264_14485 at 3399.296 kb on - strand, within CA264_14485 at 3399.346 kb on - strand, within CA264_14485
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 3,396,648 + -1.2 3,396,659 + -0.6 3,396,697 + -0.3 3,396,727 + +1.8 3,396,727 + -0.2 3,396,728 - -0.1 3,396,729 + +1.2 3,396,729 + +1.2 3,396,730 - -1.4 3,396,730 - +1.0 3,396,730 - -1.4 3,396,730 - -0.8 3,396,733 + +0.2 3,396,733 + +0.6 3,396,734 - -0.8 3,396,780 - -0.6 3,396,791 - -0.6 3,396,850 - -0.3 3,396,879 + -0.5 3,396,951 + -0.6 3,397,005 + +1.2 3,397,090 - +0.8 3,397,090 - +0.6 3,397,146 + -0.3 3,397,147 - -0.3 3,397,148 + +2.0 3,397,149 - +1.2 3,397,149 - -0.5 3,397,149 - +0.2 3,397,152 + -0.8 3,397,153 - -0.8 3,397,154 + -0.5 3,397,155 - -0.0 3,397,160 + -0.2 3,397,210 + CA264_14470 0.12 -0.7 3,397,210 + CA264_14470 0.12 +0.6 3,397,211 - CA264_14470 0.12 +0.8 3,397,311 + CA264_14470 0.42 -0.4 3,397,315 + CA264_14470 0.43 -0.2 3,397,316 - CA264_14470 0.44 +1.2 3,397,320 + CA264_14470 0.45 -0.9 3,397,320 + CA264_14470 0.45 -0.7 3,397,353 - CA264_14470 0.55 +1.2 3,397,401 + CA264_14470 0.69 -2.2 3,397,414 + CA264_14470 0.73 -1.5 3,397,415 - CA264_14470 0.73 +0.3 3,397,524 + +0.6 3,397,527 + -0.1 3,397,529 + -0.3 3,397,792 + CA264_14475 0.20 -1.3 3,397,885 + CA264_14475 0.30 -1.8 3,397,932 + CA264_14475 0.35 +0.2 3,398,005 + CA264_14475 0.43 -1.2 3,398,013 + CA264_14475 0.44 -0.1 3,398,014 - CA264_14475 0.44 +1.2 3,398,038 - CA264_14475 0.46 -0.4 3,398,067 - CA264_14475 0.49 -2.3 3,398,186 + CA264_14475 0.62 -2.0 3,398,236 - CA264_14475 0.67 -0.4 3,398,283 - CA264_14475 0.72 -1.6 3,398,286 + CA264_14475 0.72 +1.2 3,398,287 - CA264_14475 0.72 -0.2 3,398,402 - CA264_14475 0.84 -1.7 3,398,511 + -1.2 3,398,511 + -1.0 3,398,521 + -0.6 3,398,522 - -2.2 3,398,566 + -0.5 3,398,566 + +1.8 3,398,567 - -2.0 3,398,576 + +2.2 3,398,658 - CA264_14480 0.21 -2.0 3,398,709 - CA264_14480 0.32 -0.4 3,398,725 - CA264_14480 0.36 +1.2 3,398,763 + CA264_14480 0.44 -1.6 3,398,776 + CA264_14480 0.47 -0.9 3,398,777 - CA264_14480 0.47 -0.6 3,398,832 + CA264_14480 0.59 -1.6 3,398,852 + CA264_14480 0.64 -3.0 3,398,859 + CA264_14480 0.65 +1.2 3,398,860 - CA264_14480 0.66 -0.3 3,398,891 + CA264_14480 0.72 -0.6 3,398,891 + CA264_14480 0.72 +2.8 3,398,894 + CA264_14480 0.73 +0.4 3,398,895 - CA264_14480 0.73 -0.2 3,398,898 - CA264_14480 0.74 -1.0 3,399,019 - +0.4 3,399,027 - -0.8 3,399,030 + -1.2 3,399,044 + +3.3 3,399,121 - +0.0 3,399,121 - +0.3 3,399,196 + -1.1 3,399,251 - +0.5 3,399,251 - -1.1 3,399,251 - -0.3 3,399,275 - -0.8 3,399,295 + CA264_14485 0.13 +0.5 3,399,296 - CA264_14485 0.13 +0.8 3,399,346 - CA264_14485 0.19 -0.7
Or see this region's nucleotide sequence