Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12240 and CA264_12245 overlap by 1 nucleotides CA264_12245 and CA264_12250 overlap by 48 nucleotides CA264_12250 and CA264_12255 are separated by 214 nucleotides
CA264_12240: CA264_12240 - ABC transporter ATP-binding protein, at 2,851,138 to 2,852,097
_12240
CA264_12245: CA264_12245 - ABC transporter permease, at 2,852,097 to 2,852,867
_12245
CA264_12250: CA264_12250 - hypothetical protein, at 2,852,820 to 2,853,548
_12250
CA264_12255: CA264_12255 - bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II, at 2,853,763 to 2,855,010
_12255
Position (kb)
2852
2853
2854 Strain fitness (log2 ratio)
-2
-1
0
1 at 2851.833 kb on - strand, within CA264_12240 at 2852.124 kb on - strand at 2852.155 kb on + strand at 2852.155 kb on + strand at 2852.244 kb on + strand, within CA264_12245 at 2852.245 kb on - strand, within CA264_12245 at 2852.340 kb on + strand, within CA264_12245 at 2852.341 kb on - strand, within CA264_12245 at 2852.372 kb on - strand, within CA264_12245 at 2852.469 kb on + strand, within CA264_12245 at 2852.539 kb on - strand, within CA264_12245 at 2852.634 kb on + strand, within CA264_12245 at 2852.691 kb on + strand, within CA264_12245 at 2852.801 kb on - strand at 2852.838 kb on + strand at 2853.033 kb on + strand, within CA264_12250 at 2853.033 kb on + strand, within CA264_12250 at 2853.034 kb on - strand, within CA264_12250 at 2853.042 kb on + strand, within CA264_12250 at 2853.043 kb on - strand, within CA264_12250 at 2853.083 kb on - strand, within CA264_12250 at 2853.144 kb on - strand, within CA264_12250 at 2853.144 kb on - strand, within CA264_12250 at 2853.151 kb on + strand, within CA264_12250 at 2853.152 kb on - strand, within CA264_12250 at 2853.152 kb on - strand, within CA264_12250 at 2853.263 kb on + strand, within CA264_12250 at 2853.265 kb on + strand, within CA264_12250 at 2853.278 kb on + strand, within CA264_12250 at 2853.301 kb on + strand, within CA264_12250 at 2853.417 kb on + strand, within CA264_12250 at 2853.530 kb on + strand at 2853.565 kb on + strand at 2853.566 kb on - strand at 2853.569 kb on + strand at 2853.570 kb on - strand at 2853.624 kb on - strand at 2853.624 kb on - strand at 2853.633 kb on + strand at 2853.634 kb on - strand at 2853.635 kb on + strand at 2853.635 kb on + strand at 2853.642 kb on + strand at 2853.658 kb on - strand at 2853.697 kb on + strand at 2853.730 kb on + strand at 2853.730 kb on + strand at 2853.764 kb on + strand at 2853.764 kb on + strand at 2853.765 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 2,851,833 - CA264_12240 0.72 +0.8 2,852,124 - +0.0 2,852,155 + -0.7 2,852,155 + +0.1 2,852,244 + CA264_12245 0.19 -0.6 2,852,245 - CA264_12245 0.19 +0.2 2,852,340 + CA264_12245 0.32 -0.4 2,852,341 - CA264_12245 0.32 +0.3 2,852,372 - CA264_12245 0.36 -0.6 2,852,469 + CA264_12245 0.48 -0.4 2,852,539 - CA264_12245 0.57 -1.3 2,852,634 + CA264_12245 0.70 +0.1 2,852,691 + CA264_12245 0.77 -1.7 2,852,801 - +0.2 2,852,838 + +0.7 2,853,033 + CA264_12250 0.29 -0.4 2,853,033 + CA264_12250 0.29 -0.8 2,853,034 - CA264_12250 0.29 -0.4 2,853,042 + CA264_12250 0.30 -0.5 2,853,043 - CA264_12250 0.31 -0.3 2,853,083 - CA264_12250 0.36 -0.3 2,853,144 - CA264_12250 0.44 +1.0 2,853,144 - CA264_12250 0.44 +1.0 2,853,151 + CA264_12250 0.45 -0.2 2,853,152 - CA264_12250 0.46 +0.4 2,853,152 - CA264_12250 0.46 -1.0 2,853,263 + CA264_12250 0.61 +0.6 2,853,265 + CA264_12250 0.61 -0.6 2,853,278 + CA264_12250 0.63 -1.0 2,853,301 + CA264_12250 0.66 -1.2 2,853,417 + CA264_12250 0.82 +0.3 2,853,530 + -0.3 2,853,565 + +0.3 2,853,566 - +0.2 2,853,569 + +0.0 2,853,570 - -0.6 2,853,624 - +0.8 2,853,624 - +1.0 2,853,633 + -0.4 2,853,634 - +0.0 2,853,635 + +0.8 2,853,635 + -1.1 2,853,642 + +0.1 2,853,658 - -0.2 2,853,697 + +0.1 2,853,730 + -0.7 2,853,730 + +0.0 2,853,764 + -2.0 2,853,764 + +1.6 2,853,765 - +0.5
Or see this region's nucleotide sequence