Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07230 and CA264_07235 are separated by 692 nucleotides CA264_07235 and CA264_07240 are separated by 127 nucleotides CA264_07240 and CA264_07245 are separated by 225 nucleotides
CA264_07230: CA264_07230 - hypothetical protein, at 1,669,374 to 1,669,754
_07230
CA264_07235: CA264_07235 - SIGNAL peptide protein, at 1,670,447 to 1,670,845
_07235
CA264_07240: CA264_07240 - hypothetical protein, at 1,670,973 to 1,671,440
_07240
CA264_07245: CA264_07245 - hypothetical protein, at 1,671,666 to 1,672,232
_07245
Position (kb)
1670
1671 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1669.554 kb on - strand, within CA264_07230 at 1669.571 kb on + strand, within CA264_07230 at 1669.571 kb on + strand, within CA264_07230 at 1669.595 kb on - strand, within CA264_07230 at 1669.607 kb on - strand, within CA264_07230 at 1669.638 kb on + strand, within CA264_07230 at 1669.639 kb on - strand, within CA264_07230 at 1669.639 kb on - strand, within CA264_07230 at 1669.642 kb on + strand, within CA264_07230 at 1669.642 kb on + strand, within CA264_07230 at 1669.642 kb on + strand, within CA264_07230 at 1669.643 kb on - strand, within CA264_07230 at 1669.643 kb on - strand, within CA264_07230 at 1669.733 kb on + strand at 1669.733 kb on + strand at 1669.734 kb on - strand at 1669.737 kb on + strand at 1669.738 kb on - strand at 1669.738 kb on - strand at 1669.738 kb on - strand at 1669.739 kb on + strand at 1669.739 kb on + strand at 1669.740 kb on - strand at 1669.740 kb on - strand at 1669.872 kb on - strand at 1669.905 kb on + strand at 1669.905 kb on + strand at 1669.906 kb on - strand at 1669.929 kb on + strand at 1669.929 kb on + strand at 1669.944 kb on + strand at 1669.945 kb on - strand at 1669.958 kb on + strand at 1669.959 kb on - strand at 1669.962 kb on - strand at 1669.962 kb on - strand at 1669.989 kb on + strand at 1669.996 kb on + strand at 1669.996 kb on + strand at 1669.997 kb on - strand at 1670.002 kb on + strand at 1670.003 kb on - strand at 1670.003 kb on - strand at 1670.006 kb on - strand at 1670.022 kb on + strand at 1670.028 kb on + strand at 1670.028 kb on + strand at 1670.028 kb on + strand at 1670.029 kb on - strand at 1670.029 kb on - strand at 1670.029 kb on - strand at 1670.118 kb on + strand at 1670.119 kb on - strand at 1670.126 kb on + strand at 1670.126 kb on + strand at 1670.127 kb on - strand at 1670.127 kb on - strand at 1670.128 kb on + strand at 1670.128 kb on + strand at 1670.129 kb on - strand at 1670.129 kb on - strand at 1670.207 kb on + strand at 1670.237 kb on + strand at 1670.237 kb on + strand at 1670.245 kb on + strand at 1670.246 kb on - strand at 1670.356 kb on - strand at 1670.366 kb on + strand at 1670.377 kb on + strand at 1670.400 kb on + strand at 1670.430 kb on + strand at 1670.436 kb on + strand at 1670.436 kb on + strand at 1670.436 kb on + strand at 1670.437 kb on - strand at 1670.439 kb on + strand at 1670.534 kb on + strand, within CA264_07235 at 1670.614 kb on + strand, within CA264_07235 at 1670.665 kb on + strand, within CA264_07235 at 1670.714 kb on - strand, within CA264_07235 at 1670.714 kb on - strand, within CA264_07235 at 1670.717 kb on + strand, within CA264_07235 at 1670.717 kb on + strand, within CA264_07235 at 1670.717 kb on + strand, within CA264_07235 at 1670.718 kb on - strand, within CA264_07235 at 1670.718 kb on - strand, within CA264_07235 at 1670.741 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.750 kb on + strand, within CA264_07235 at 1670.752 kb on + strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.753 kb on - strand, within CA264_07235 at 1670.773 kb on + strand, within CA264_07235 at 1670.792 kb on + strand, within CA264_07235 at 1670.793 kb on - strand, within CA264_07235 at 1670.793 kb on - strand, within CA264_07235 at 1670.844 kb on - strand at 1670.902 kb on + strand at 1670.910 kb on + strand at 1670.995 kb on + strand at 1670.995 kb on + strand at 1671.083 kb on - strand, within CA264_07240 at 1671.130 kb on + strand, within CA264_07240 at 1671.146 kb on + strand, within CA264_07240 at 1671.147 kb on - strand, within CA264_07240 at 1671.147 kb on - strand, within CA264_07240 at 1671.168 kb on + strand, within CA264_07240 at 1671.168 kb on + strand, within CA264_07240 at 1671.169 kb on - strand, within CA264_07240 at 1671.169 kb on - strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.247 kb on + strand, within CA264_07240 at 1671.248 kb on - strand, within CA264_07240 at 1671.248 kb on - strand, within CA264_07240 at 1671.278 kb on + strand, within CA264_07240 at 1671.417 kb on + strand at 1671.472 kb on + strand at 1671.472 kb on + strand at 1671.473 kb on - strand at 1671.501 kb on + strand at 1671.588 kb on + strand at 1671.589 kb on - strand at 1671.644 kb on + strand at 1671.644 kb on + strand at 1671.760 kb on - strand, within CA264_07245 at 1671.793 kb on - strand, within CA264_07245 at 1671.793 kb on - strand, within CA264_07245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 1,669,554 - CA264_07230 0.47 +0.1 1,669,571 + CA264_07230 0.52 -0.8 1,669,571 + CA264_07230 0.52 -0.4 1,669,595 - CA264_07230 0.58 -0.1 1,669,607 - CA264_07230 0.61 +0.4 1,669,638 + CA264_07230 0.69 -0.3 1,669,639 - CA264_07230 0.70 +0.9 1,669,639 - CA264_07230 0.70 -0.2 1,669,642 + CA264_07230 0.70 +2.3 1,669,642 + CA264_07230 0.70 +0.1 1,669,642 + CA264_07230 0.70 +0.7 1,669,643 - CA264_07230 0.71 -0.1 1,669,643 - CA264_07230 0.71 -0.3 1,669,733 + -0.4 1,669,733 + +1.2 1,669,734 - -0.0 1,669,737 + +0.7 1,669,738 - +0.0 1,669,738 - -0.2 1,669,738 - -0.0 1,669,739 + -0.1 1,669,739 + -0.0 1,669,740 - -0.2 1,669,740 - -0.1 1,669,872 - +0.7 1,669,905 + +0.0 1,669,905 + +0.2 1,669,906 - -0.2 1,669,929 + -0.6 1,669,929 + +0.1 1,669,944 + -0.6 1,669,945 - -0.4 1,669,958 + -0.4 1,669,959 - -0.8 1,669,962 - +0.3 1,669,962 - +0.2 1,669,989 + +0.1 1,669,996 + -0.3 1,669,996 + +0.1 1,669,997 - +0.4 1,670,002 + -2.1 1,670,003 - -0.2 1,670,003 - +0.6 1,670,006 - -0.5 1,670,022 + +0.0 1,670,028 + +0.7 1,670,028 + -1.0 1,670,028 + -0.3 1,670,029 - +1.0 1,670,029 - +0.0 1,670,029 - -0.3 1,670,118 + -0.3 1,670,119 - -0.7 1,670,126 + -0.1 1,670,126 + +0.7 1,670,127 - -0.4 1,670,127 - +0.7 1,670,128 + +0.7 1,670,128 + -0.3 1,670,129 - -1.2 1,670,129 - -0.8 1,670,207 + -0.6 1,670,237 + +0.7 1,670,237 + -1.0 1,670,245 + +0.5 1,670,246 - +0.3 1,670,356 - +0.1 1,670,366 + +0.7 1,670,377 + +0.7 1,670,400 + -0.1 1,670,430 + +0.0 1,670,436 + +0.2 1,670,436 + -0.3 1,670,436 + -0.3 1,670,437 - -0.4 1,670,439 + -0.5 1,670,534 + CA264_07235 0.22 -0.3 1,670,614 + CA264_07235 0.42 -1.3 1,670,665 + CA264_07235 0.55 +2.7 1,670,714 - CA264_07235 0.67 +0.5 1,670,714 - CA264_07235 0.67 -0.9 1,670,717 + CA264_07235 0.68 -0.3 1,670,717 + CA264_07235 0.68 -0.0 1,670,717 + CA264_07235 0.68 +1.2 1,670,718 - CA264_07235 0.68 -0.7 1,670,718 - CA264_07235 0.68 -0.2 1,670,741 + CA264_07235 0.74 -0.8 1,670,750 + CA264_07235 0.76 -1.8 1,670,750 + CA264_07235 0.76 -0.8 1,670,750 + CA264_07235 0.76 -0.9 1,670,750 + CA264_07235 0.76 +0.5 1,670,752 + CA264_07235 0.76 -0.3 1,670,753 - CA264_07235 0.77 +1.1 1,670,753 - CA264_07235 0.77 +0.1 1,670,753 - CA264_07235 0.77 -0.4 1,670,753 - CA264_07235 0.77 +0.1 1,670,773 + CA264_07235 0.82 +0.7 1,670,792 + CA264_07235 0.86 +0.7 1,670,793 - CA264_07235 0.87 +1.6 1,670,793 - CA264_07235 0.87 -0.1 1,670,844 - +0.5 1,670,902 + -0.7 1,670,910 + -0.3 1,670,995 + -0.5 1,670,995 + +0.7 1,671,083 - CA264_07240 0.24 -0.3 1,671,130 + CA264_07240 0.34 -0.6 1,671,146 + CA264_07240 0.37 +0.3 1,671,147 - CA264_07240 0.37 -1.7 1,671,147 - CA264_07240 0.37 +0.0 1,671,168 + CA264_07240 0.42 -1.4 1,671,168 + CA264_07240 0.42 -0.8 1,671,169 - CA264_07240 0.42 -0.4 1,671,169 - CA264_07240 0.42 +0.7 1,671,247 + CA264_07240 0.59 -0.7 1,671,247 + CA264_07240 0.59 -0.8 1,671,247 + CA264_07240 0.59 -2.3 1,671,247 + CA264_07240 0.59 +0.2 1,671,248 - CA264_07240 0.59 +0.0 1,671,248 - CA264_07240 0.59 -0.1 1,671,278 + CA264_07240 0.65 -1.0 1,671,417 + -0.3 1,671,472 + -1.3 1,671,472 + +1.7 1,671,473 - -1.1 1,671,501 + -0.8 1,671,588 + +1.0 1,671,589 - -1.2 1,671,644 + -1.2 1,671,644 + -1.1 1,671,760 - CA264_07245 0.17 -2.3 1,671,793 - CA264_07245 0.22 -2.4 1,671,793 - CA264_07245 0.22 -1.7
Or see this region's nucleotide sequence