Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04020 and CA264_04025 are separated by 316 nucleotides CA264_04025 and CA264_04030 are separated by 120 nucleotides CA264_04030 and CA264_04035 are separated by 4 nucleotides
CA264_04020: CA264_04020 - hypothetical protein, at 931,649 to 932,614
_04020
CA264_04025: CA264_04025 - hypothetical protein, at 932,931 to 933,611
_04025
CA264_04030: CA264_04030 - multiple antibiotic resistance (MarC)-like protein, at 933,732 to 934,349
_04030
CA264_04035: CA264_04035 - universal stress protein family protein, at 934,354 to 935,229
_04035
Position (kb)
932
933
934 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 931.966 kb on + strand, within CA264_04020 at 932.201 kb on + strand, within CA264_04020 at 932.202 kb on - strand, within CA264_04020 at 932.242 kb on + strand, within CA264_04020 at 932.246 kb on + strand, within CA264_04020 at 932.247 kb on - strand, within CA264_04020 at 932.247 kb on - strand, within CA264_04020 at 932.260 kb on - strand, within CA264_04020 at 932.296 kb on - strand, within CA264_04020 at 932.296 kb on - strand, within CA264_04020 at 932.510 kb on - strand, within CA264_04020 at 932.578 kb on + strand at 932.578 kb on + strand at 932.590 kb on - strand at 932.623 kb on - strand at 932.699 kb on + strand at 932.770 kb on + strand at 932.855 kb on + strand at 932.855 kb on + strand at 932.857 kb on + strand at 932.858 kb on - strand at 932.877 kb on - strand at 932.894 kb on + strand at 932.894 kb on + strand at 932.894 kb on + strand at 932.894 kb on + strand at 932.894 kb on + strand at 932.894 kb on + strand at 932.895 kb on - strand at 932.895 kb on - strand at 932.895 kb on - strand at 932.896 kb on + strand at 932.896 kb on + strand at 932.896 kb on + strand at 932.897 kb on - strand at 932.897 kb on - strand at 932.917 kb on + strand at 932.930 kb on + strand at 932.931 kb on - strand at 933.114 kb on + strand, within CA264_04025 at 933.151 kb on + strand, within CA264_04025 at 933.152 kb on - strand, within CA264_04025 at 933.152 kb on - strand, within CA264_04025 at 933.173 kb on + strand, within CA264_04025 at 933.276 kb on + strand, within CA264_04025 at 933.300 kb on + strand, within CA264_04025 at 933.300 kb on + strand, within CA264_04025 at 933.300 kb on + strand, within CA264_04025 at 933.301 kb on - strand, within CA264_04025 at 933.301 kb on - strand, within CA264_04025 at 933.301 kb on - strand, within CA264_04025 at 933.303 kb on + strand, within CA264_04025 at 933.303 kb on + strand, within CA264_04025 at 933.303 kb on + strand, within CA264_04025 at 933.303 kb on + strand, within CA264_04025 at 933.304 kb on - strand, within CA264_04025 at 933.348 kb on + strand, within CA264_04025 at 933.367 kb on + strand, within CA264_04025 at 933.367 kb on + strand, within CA264_04025 at 933.368 kb on - strand, within CA264_04025 at 933.411 kb on + strand, within CA264_04025 at 933.412 kb on - strand, within CA264_04025 at 933.412 kb on - strand, within CA264_04025 at 933.461 kb on + strand, within CA264_04025 at 933.583 kb on + strand at 933.583 kb on + strand at 933.583 kb on + strand at 933.584 kb on - strand at 933.592 kb on - strand at 933.609 kb on + strand at 933.610 kb on - strand at 933.680 kb on + strand at 933.681 kb on - strand at 933.681 kb on - strand at 933.702 kb on + strand at 933.702 kb on + strand at 933.703 kb on - strand at 933.703 kb on - strand at 933.713 kb on + strand at 933.714 kb on - strand at 933.732 kb on - strand at 933.736 kb on + strand at 933.854 kb on + strand, within CA264_04030 at 933.854 kb on + strand, within CA264_04030 at 933.855 kb on - strand, within CA264_04030 at 933.978 kb on + strand, within CA264_04030 at 933.979 kb on - strand, within CA264_04030 at 933.982 kb on + strand, within CA264_04030 at 933.983 kb on - strand, within CA264_04030 at 933.983 kb on - strand, within CA264_04030 at 933.986 kb on + strand, within CA264_04030 at 933.987 kb on - strand, within CA264_04030 at 933.987 kb on - strand, within CA264_04030 at 934.064 kb on + strand, within CA264_04030 at 934.164 kb on + strand, within CA264_04030 at 934.164 kb on + strand, within CA264_04030 at 934.164 kb on + strand, within CA264_04030 at 934.165 kb on - strand, within CA264_04030 at 934.165 kb on - strand, within CA264_04030 at 934.165 kb on - strand, within CA264_04030 at 934.175 kb on + strand, within CA264_04030 at 934.175 kb on + strand, within CA264_04030 at 934.277 kb on - strand, within CA264_04030 at 934.290 kb on - strand at 934.292 kb on - strand at 934.292 kb on - strand at 934.292 kb on - strand at 934.346 kb on - strand at 934.347 kb on + strand at 934.348 kb on - strand at 934.355 kb on + strand at 934.356 kb on - strand at 934.356 kb on - strand at 934.356 kb on - strand at 934.377 kb on - strand at 934.413 kb on - strand at 934.490 kb on + strand, within CA264_04035 at 934.490 kb on + strand, within CA264_04035 at 934.490 kb on + strand, within CA264_04035 at 934.491 kb on - strand, within CA264_04035
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 931,966 + CA264_04020 0.33 -0.2 932,201 + CA264_04020 0.57 -0.3 932,202 - CA264_04020 0.57 -0.7 932,242 + CA264_04020 0.61 -0.1 932,246 + CA264_04020 0.62 +1.9 932,247 - CA264_04020 0.62 +0.9 932,247 - CA264_04020 0.62 -0.5 932,260 - CA264_04020 0.63 +2.7 932,296 - CA264_04020 0.67 -0.4 932,296 - CA264_04020 0.67 +0.2 932,510 - CA264_04020 0.89 +0.1 932,578 + -0.6 932,578 + -0.2 932,590 - +0.1 932,623 - -0.2 932,699 + +0.6 932,770 + -0.1 932,855 + -0.3 932,855 + +0.8 932,857 + +0.9 932,858 - +1.7 932,877 - -0.4 932,894 + -0.8 932,894 + -1.6 932,894 + +0.4 932,894 + +0.3 932,894 + -0.2 932,894 + +0.9 932,895 - -0.8 932,895 - -0.5 932,895 - -0.1 932,896 + +0.7 932,896 + +0.0 932,896 + -0.1 932,897 - -0.6 932,897 - -1.1 932,917 + +0.1 932,930 + -0.0 932,931 - -0.3 933,114 + CA264_04025 0.27 -0.1 933,151 + CA264_04025 0.32 -2.1 933,152 - CA264_04025 0.32 -0.8 933,152 - CA264_04025 0.32 -0.4 933,173 + CA264_04025 0.36 +0.8 933,276 + CA264_04025 0.51 +0.3 933,300 + CA264_04025 0.54 -0.8 933,300 + CA264_04025 0.54 -0.7 933,300 + CA264_04025 0.54 -1.1 933,301 - CA264_04025 0.54 -0.9 933,301 - CA264_04025 0.54 +0.3 933,301 - CA264_04025 0.54 -0.7 933,303 + CA264_04025 0.55 +1.1 933,303 + CA264_04025 0.55 -0.9 933,303 + CA264_04025 0.55 -0.1 933,303 + CA264_04025 0.55 -0.5 933,304 - CA264_04025 0.55 +0.1 933,348 + CA264_04025 0.61 +0.9 933,367 + CA264_04025 0.64 +0.3 933,367 + CA264_04025 0.64 +0.6 933,368 - CA264_04025 0.64 -0.1 933,411 + CA264_04025 0.70 -1.0 933,412 - CA264_04025 0.71 +0.1 933,412 - CA264_04025 0.71 -0.3 933,461 + CA264_04025 0.78 -0.5 933,583 + -1.3 933,583 + -2.5 933,583 + +0.2 933,584 - +0.8 933,592 - +0.4 933,609 + +0.7 933,610 - -0.4 933,680 + -0.7 933,681 - +1.2 933,681 - -0.7 933,702 + -0.8 933,702 + -0.5 933,703 - -0.7 933,703 - +0.1 933,713 + +0.1 933,714 - +1.1 933,732 - +1.0 933,736 + +0.6 933,854 + CA264_04030 0.20 +0.0 933,854 + CA264_04030 0.20 -0.5 933,855 - CA264_04030 0.20 +0.4 933,978 + CA264_04030 0.40 -0.1 933,979 - CA264_04030 0.40 -0.7 933,982 + CA264_04030 0.40 -0.4 933,983 - CA264_04030 0.41 +0.1 933,983 - CA264_04030 0.41 -0.7 933,986 + CA264_04030 0.41 -1.4 933,987 - CA264_04030 0.41 +1.5 933,987 - CA264_04030 0.41 +0.1 934,064 + CA264_04030 0.54 +0.0 934,164 + CA264_04030 0.70 -0.6 934,164 + CA264_04030 0.70 -1.4 934,164 + CA264_04030 0.70 -1.1 934,165 - CA264_04030 0.70 +0.3 934,165 - CA264_04030 0.70 -0.1 934,165 - CA264_04030 0.70 -1.1 934,175 + CA264_04030 0.72 +1.2 934,175 + CA264_04030 0.72 +0.6 934,277 - CA264_04030 0.88 -1.7 934,290 - -1.7 934,292 - -0.1 934,292 - +0.7 934,292 - -0.5 934,346 - +0.2 934,347 + +0.3 934,348 - -0.8 934,355 + -0.5 934,356 - +0.9 934,356 - -0.7 934,356 - -1.2 934,377 - -1.2 934,413 - -2.0 934,490 + CA264_04035 0.16 +0.9 934,490 + CA264_04035 0.16 -0.1 934,490 + CA264_04035 0.16 -0.8 934,491 - CA264_04035 0.16 +0.3
Or see this region's nucleotide sequence