Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02580 and CA264_02585 are separated by 7 nucleotides CA264_02585 and CA264_02590 are separated by 219 nucleotides CA264_02590 and CA264_02595 are separated by 195 nucleotides
CA264_02580: CA264_02580 - transcriptional regulator, at 600,670 to 600,978
_02580
CA264_02585: CA264_02585 - hypothetical protein, at 600,986 to 601,609
_02585
CA264_02590: CA264_02590 - ribosomal subunit interface protein, at 601,829 to 602,134
_02590
CA264_02595: CA264_02595 - oxidoreductase, at 602,330 to 603,112
_02595
Position (kb) 601
602
603 Strain fitness (log2 ratio) -2
-1
0
1
2 at 600.951 kb on + strand at 600.955 kb on + strand at 600.955 kb on + strand at 600.956 kb on - strand at 600.956 kb on - strand at 600.957 kb on + strand at 600.964 kb on + strand at 600.964 kb on + strand at 600.964 kb on + strand at 600.965 kb on - strand at 600.980 kb on + strand at 601.005 kb on + strand at 601.007 kb on + strand at 601.008 kb on - strand at 601.020 kb on + strand at 601.020 kb on + strand at 601.025 kb on + strand at 601.025 kb on + strand at 601.025 kb on + strand at 601.026 kb on - strand at 601.081 kb on - strand, within CA264_02585 at 601.157 kb on - strand, within CA264_02585 at 601.196 kb on + strand, within CA264_02585 at 601.226 kb on + strand, within CA264_02585 at 601.271 kb on + strand, within CA264_02585 at 601.440 kb on + strand, within CA264_02585 at 601.440 kb on + strand, within CA264_02585 at 601.441 kb on - strand, within CA264_02585 at 601.445 kb on + strand, within CA264_02585 at 601.446 kb on - strand, within CA264_02585 at 601.446 kb on - strand, within CA264_02585 at 601.487 kb on + strand, within CA264_02585 at 601.559 kb on - strand at 601.559 kb on - strand at 601.647 kb on - strand at 601.667 kb on + strand at 601.668 kb on - strand at 601.668 kb on - strand at 601.669 kb on + strand at 601.669 kb on + strand at 601.669 kb on + strand at 601.674 kb on + strand at 601.680 kb on - strand at 601.759 kb on + strand at 601.815 kb on + strand at 601.835 kb on + strand at 601.836 kb on - strand at 601.836 kb on - strand at 601.837 kb on + strand at 601.857 kb on + strand at 601.869 kb on + strand, within CA264_02590 at 601.870 kb on - strand, within CA264_02590 at 601.885 kb on - strand, within CA264_02590 at 601.903 kb on - strand, within CA264_02590 at 601.903 kb on - strand, within CA264_02590 at 602.000 kb on - strand, within CA264_02590 at 602.049 kb on + strand, within CA264_02590 at 602.050 kb on - strand, within CA264_02590 at 602.078 kb on + strand, within CA264_02590 at 602.079 kb on - strand, within CA264_02590 at 602.177 kb on + strand at 602.177 kb on + strand at 602.178 kb on - strand at 602.180 kb on - strand at 602.187 kb on + strand at 602.187 kb on + strand at 602.285 kb on + strand at 602.286 kb on - strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.287 kb on + strand at 602.291 kb on + strand at 602.292 kb on - strand at 602.292 kb on - strand at 602.299 kb on + strand at 602.300 kb on - strand at 602.300 kb on - strand at 602.300 kb on - strand at 602.302 kb on - strand at 602.316 kb on + strand at 602.317 kb on - strand at 602.342 kb on + strand at 602.388 kb on + strand at 602.388 kb on + strand at 602.398 kb on + strand at 602.435 kb on - strand, within CA264_02595 at 602.505 kb on + strand, within CA264_02595 at 602.506 kb on - strand, within CA264_02595 at 602.526 kb on + strand, within CA264_02595 at 603.052 kb on + strand at 603.106 kb on + strand at 603.117 kb on - strand at 603.117 kb on - strand at 603.131 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 600,951 + +2.0 600,955 + -0.1 600,955 + -0.4 600,956 - -0.9 600,956 - -0.3 600,957 + +1.0 600,964 + -0.8 600,964 + -0.0 600,964 + -0.4 600,965 - +2.0 600,980 + -0.2 601,005 + -0.0 601,007 + -0.0 601,008 - -1.0 601,020 + -0.8 601,020 + +0.2 601,025 + -0.3 601,025 + -0.6 601,025 + -1.0 601,026 - -0.7 601,081 - CA264_02585 0.15 -0.3 601,157 - CA264_02585 0.27 -0.6 601,196 + CA264_02585 0.34 -0.5 601,226 + CA264_02585 0.38 -0.3 601,271 + CA264_02585 0.46 -0.5 601,440 + CA264_02585 0.73 +0.4 601,440 + CA264_02585 0.73 +1.5 601,441 - CA264_02585 0.73 -0.8 601,445 + CA264_02585 0.74 +0.2 601,446 - CA264_02585 0.74 -0.3 601,446 - CA264_02585 0.74 -1.6 601,487 + CA264_02585 0.80 -1.6 601,559 - +0.2 601,559 - +0.2 601,647 - -1.0 601,667 + -1.0 601,668 - +0.6 601,668 - -0.6 601,669 + -0.3 601,669 + -0.9 601,669 + -0.4 601,674 + +0.1 601,680 - -0.2 601,759 + -0.8 601,815 + -0.5 601,835 + -0.5 601,836 - -0.4 601,836 - -0.1 601,837 + +0.2 601,857 + +1.2 601,869 + CA264_02590 0.13 -0.3 601,870 - CA264_02590 0.13 -0.0 601,885 - CA264_02590 0.18 -0.5 601,903 - CA264_02590 0.24 -1.3 601,903 - CA264_02590 0.24 -2.5 602,000 - CA264_02590 0.56 -0.6 602,049 + CA264_02590 0.72 -1.0 602,050 - CA264_02590 0.72 -0.2 602,078 + CA264_02590 0.81 -0.6 602,079 - CA264_02590 0.82 +0.4 602,177 + +0.0 602,177 + -1.0 602,178 - -0.4 602,180 - +0.8 602,187 + +0.3 602,187 + -0.8 602,285 + +0.8 602,286 - -1.3 602,287 + +0.0 602,287 + -0.0 602,287 + +1.2 602,287 + -0.1 602,291 + -0.2 602,292 - +0.4 602,292 - -0.5 602,299 + -0.3 602,300 - -0.2 602,300 - -0.0 602,300 - -0.8 602,302 - +0.2 602,316 + +0.1 602,317 - +0.4 602,342 + +1.3 602,388 + +0.1 602,388 + +0.4 602,398 + +0.8 602,435 - CA264_02595 0.13 -2.2 602,505 + CA264_02595 0.22 +0.2 602,506 - CA264_02595 0.22 -0.2 602,526 + CA264_02595 0.25 -0.3 603,052 + -0.4 603,106 + +0.7 603,117 - -0.6 603,117 - -0.1 603,131 - -0.4
Or see this region's nucleotide sequence