Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01910 and CA264_01915 are separated by 292 nucleotides CA264_01915 and CA264_01920 overlap by 4 nucleotides CA264_01920 and CA264_01925 are separated by 347 nucleotides CA264_01925 and CA264_01930 are separated by 11 nucleotides
CA264_01910: CA264_01910 - transposase, at 445,924 to 446,472
_01910
CA264_01915: CA264_01915 - hypothetical protein, at 446,765 to 447,676
_01915
CA264_01920: CA264_01920 - hypothetical protein, at 447,673 to 448,083
_01920
CA264_01925: CA264_01925 - tRNA-Leu, at 448,431 to 448,514
_01925
CA264_01930: CA264_01930 - Fe-S protein assembly co-chaperone HscB, at 448,526 to 449,062
_01930
Position (kb) 446
447
448 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.853 kb on - strand at 445.863 kb on + strand at 445.901 kb on - strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.911 kb on - strand at 445.939 kb on - strand at 445.941 kb on + strand at 445.942 kb on - strand at 445.967 kb on + strand at 445.985 kb on + strand, within CA264_01910 at 445.985 kb on + strand, within CA264_01910 at 445.986 kb on - strand, within CA264_01910 at 445.989 kb on + strand, within CA264_01910 at 445.990 kb on - strand, within CA264_01910 at 446.041 kb on - strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.077 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.307 kb on + strand, within CA264_01910 at 446.352 kb on + strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.378 kb on + strand, within CA264_01910 at 446.379 kb on - strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.411 kb on - strand, within CA264_01910 at 446.432 kb on + strand at 446.435 kb on - strand at 446.460 kb on - strand at 446.472 kb on + strand at 446.473 kb on - strand at 446.479 kb on + strand at 446.479 kb on + strand at 446.480 kb on - strand at 446.480 kb on - strand at 446.482 kb on + strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.490 kb on - strand at 446.500 kb on + strand at 446.500 kb on + strand at 446.501 kb on - strand at 446.509 kb on - strand at 446.538 kb on + strand at 446.538 kb on + strand at 446.539 kb on - strand at 446.545 kb on + strand at 446.549 kb on + strand at 446.550 kb on - strand at 446.550 kb on - strand at 446.695 kb on - strand at 446.695 kb on - strand at 446.716 kb on + strand at 446.716 kb on + strand at 446.716 kb on + strand at 446.717 kb on - strand at 446.723 kb on - strand at 446.820 kb on + strand at 446.877 kb on + strand, within CA264_01915 at 446.941 kb on + strand, within CA264_01915 at 446.969 kb on + strand, within CA264_01915 at 447.052 kb on + strand, within CA264_01915 at 447.121 kb on - strand, within CA264_01915 at 447.121 kb on - strand, within CA264_01915 at 447.132 kb on - strand, within CA264_01915 at 447.153 kb on - strand, within CA264_01915 at 447.157 kb on + strand, within CA264_01915 at 447.227 kb on + strand, within CA264_01915 at 447.230 kb on - strand, within CA264_01915 at 447.238 kb on + strand, within CA264_01915 at 447.252 kb on - strand, within CA264_01915 at 447.270 kb on - strand, within CA264_01915 at 447.434 kb on + strand, within CA264_01915 at 447.447 kb on - strand, within CA264_01915 at 447.447 kb on - strand, within CA264_01915 at 447.447 kb on - strand, within CA264_01915 at 447.480 kb on - strand, within CA264_01915 at 447.522 kb on - strand, within CA264_01915 at 447.542 kb on + strand, within CA264_01915 at 447.592 kb on + strand at 447.592 kb on + strand at 447.593 kb on - strand at 447.648 kb on - strand at 447.648 kb on - strand at 447.661 kb on + strand at 447.662 kb on - strand at 447.676 kb on + strand at 447.677 kb on - strand at 447.678 kb on + strand at 447.679 kb on - strand at 447.679 kb on - strand at 447.698 kb on - strand at 447.702 kb on - strand at 447.702 kb on - strand at 447.706 kb on + strand at 447.706 kb on + strand at 447.706 kb on + strand at 447.726 kb on + strand, within CA264_01920 at 447.726 kb on + strand, within CA264_01920 at 447.727 kb on - strand, within CA264_01920 at 447.727 kb on - strand, within CA264_01920 at 447.732 kb on + strand, within CA264_01920 at 447.732 kb on + strand, within CA264_01920 at 447.733 kb on - strand, within CA264_01920 at 447.736 kb on + strand, within CA264_01920 at 447.737 kb on - strand, within CA264_01920 at 447.743 kb on - strand, within CA264_01920 at 447.744 kb on + strand, within CA264_01920 at 447.784 kb on - strand, within CA264_01920 at 447.808 kb on - strand, within CA264_01920 at 447.818 kb on - strand, within CA264_01920 at 447.916 kb on + strand, within CA264_01920 at 447.919 kb on - strand, within CA264_01920 at 447.958 kb on + strand, within CA264_01920 at 447.979 kb on - strand, within CA264_01920 at 448.067 kb on - strand at 448.067 kb on - strand at 448.067 kb on - strand at 448.111 kb on + strand at 448.120 kb on + strand at 448.120 kb on + strand at 448.163 kb on - strand at 448.164 kb on + strand at 448.164 kb on + strand at 448.164 kb on + strand at 448.164 kb on + strand at 448.165 kb on - strand at 448.168 kb on - strand at 448.233 kb on + strand at 448.234 kb on - strand at 448.288 kb on - strand at 448.334 kb on + strand at 448.340 kb on + strand at 448.340 kb on + strand at 448.393 kb on + strand at 448.402 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 445,769 + +0.6 445,769 + +0.1 445,769 + -2.2 445,769 + -0.2 445,769 + +0.3 445,769 + -0.1 445,803 + -0.3 445,803 + +0.2 445,803 + -0.6 445,803 + -0.8 445,803 + +0.3 445,804 - -1.7 445,804 - -1.8 445,804 - +0.3 445,853 - +0.3 445,863 + -0.5 445,901 - -0.5 445,910 + -0.4 445,910 + -0.6 445,910 + +1.0 445,910 + -0.5 445,911 - -1.2 445,939 - +0.1 445,941 + +1.7 445,942 - -0.3 445,967 + -0.0 445,985 + CA264_01910 0.11 +0.4 445,985 + CA264_01910 0.11 +2.0 445,986 - CA264_01910 0.11 +1.4 445,989 + CA264_01910 0.12 -0.0 445,990 - CA264_01910 0.12 -0.0 446,041 - CA264_01910 0.21 +1.0 446,042 + CA264_01910 0.21 -1.7 446,042 + CA264_01910 0.21 -0.6 446,043 - CA264_01910 0.22 -0.5 446,043 - CA264_01910 0.22 -0.8 446,043 - CA264_01910 0.22 -1.0 446,077 - CA264_01910 0.28 -0.1 446,227 - CA264_01910 0.55 +0.0 446,227 - CA264_01910 0.55 -1.2 446,307 + CA264_01910 0.70 +1.3 446,352 + CA264_01910 0.78 -2.0 446,353 - CA264_01910 0.78 -1.3 446,353 - CA264_01910 0.78 +2.0 446,378 + CA264_01910 0.83 +0.4 446,379 - CA264_01910 0.83 -1.0 446,410 + CA264_01910 0.89 -0.2 446,410 + CA264_01910 0.89 -0.3 446,411 - CA264_01910 0.89 -0.5 446,432 + -0.4 446,435 - +0.1 446,460 - -0.7 446,472 + +0.4 446,473 - -1.0 446,479 + +0.2 446,479 + -0.3 446,480 - +0.2 446,480 - +0.1 446,482 + -0.1 446,483 - -0.8 446,483 - +1.6 446,483 - +0.7 446,490 - -0.7 446,500 + -0.3 446,500 + +0.3 446,501 - -0.6 446,509 - +0.5 446,538 + -1.9 446,538 + -1.3 446,539 - -0.1 446,545 + -0.2 446,549 + +1.5 446,550 - +0.3 446,550 - -1.2 446,695 - -0.0 446,695 - -0.0 446,716 + +0.0 446,716 + +0.2 446,716 + -1.0 446,717 - -2.0 446,723 - -0.1 446,820 + -2.6 446,877 + CA264_01915 0.12 -0.8 446,941 + CA264_01915 0.19 +0.4 446,969 + CA264_01915 0.22 -0.2 447,052 + CA264_01915 0.31 -0.6 447,121 - CA264_01915 0.39 +0.4 447,121 - CA264_01915 0.39 +0.5 447,132 - CA264_01915 0.40 +0.8 447,153 - CA264_01915 0.43 +1.3 447,157 + CA264_01915 0.43 +0.0 447,227 + CA264_01915 0.51 -0.0 447,230 - CA264_01915 0.51 -0.6 447,238 + CA264_01915 0.52 +1.0 447,252 - CA264_01915 0.53 -0.2 447,270 - CA264_01915 0.55 -0.2 447,434 + CA264_01915 0.73 -2.8 447,447 - CA264_01915 0.75 -1.1 447,447 - CA264_01915 0.75 -0.9 447,447 - CA264_01915 0.75 -1.6 447,480 - CA264_01915 0.78 -0.5 447,522 - CA264_01915 0.83 -0.3 447,542 + CA264_01915 0.85 -0.2 447,592 + -0.3 447,592 + -0.0 447,593 - +0.3 447,648 - -0.7 447,648 - -0.0 447,661 + -1.1 447,662 - -2.2 447,676 + -1.8 447,677 - +0.5 447,678 + +0.3 447,679 - -0.6 447,679 - +0.2 447,698 - +0.1 447,702 - -0.3 447,702 - -2.3 447,706 + +0.6 447,706 + -0.1 447,706 + -0.4 447,726 + CA264_01920 0.13 +2.6 447,726 + CA264_01920 0.13 +0.4 447,727 - CA264_01920 0.13 -1.1 447,727 - CA264_01920 0.13 +0.4 447,732 + CA264_01920 0.14 +0.0 447,732 + CA264_01920 0.14 -3.0 447,733 - CA264_01920 0.15 +1.2 447,736 + CA264_01920 0.15 -0.7 447,737 - CA264_01920 0.16 +0.3 447,743 - CA264_01920 0.17 +1.0 447,744 + CA264_01920 0.17 -0.5 447,784 - CA264_01920 0.27 +0.7 447,808 - CA264_01920 0.33 -0.8 447,818 - CA264_01920 0.35 -0.2 447,916 + CA264_01920 0.59 -1.0 447,919 - CA264_01920 0.60 -0.0 447,958 + CA264_01920 0.69 -0.0 447,979 - CA264_01920 0.74 -0.2 448,067 - -0.1 448,067 - -0.0 448,067 - -0.4 448,111 + +0.1 448,120 + +1.6 448,120 + -0.3 448,163 - +0.1 448,164 + +0.1 448,164 + +0.5 448,164 + -0.2 448,164 + -0.9 448,165 - +0.6 448,168 - -0.2 448,233 + +0.2 448,234 - +0.1 448,288 - -0.8 448,334 + -0.7 448,340 + +0.2 448,340 + +0.4 448,393 + -1.8 448,402 + -0.1
Or see this region's nucleotide sequence