Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00330 and CA264_00335 overlap by 23 nucleotides CA264_00335 and CA264_00340 are separated by 303 nucleotides
CA264_00330: CA264_00330 - hypothetical protein, at 76,194 to 76,925
_00330
CA264_00335: CA264_00335 - dicarboxylate/amino acid:cation symporter, at 76,903 to 78,207
_00335
CA264_00340: CA264_00340 - ZIP family zinc transporter, at 78,511 to 79,260
_00340
Position (kb)
76
77
78
79 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 76.024 kb on - strand at 76.167 kb on - strand at 76.207 kb on + strand at 76.208 kb on - strand at 76.208 kb on - strand at 76.211 kb on + strand at 76.211 kb on + strand at 76.211 kb on + strand at 76.326 kb on + strand, within CA264_00330 at 76.327 kb on - strand, within CA264_00330 at 76.419 kb on + strand, within CA264_00330 at 76.424 kb on + strand, within CA264_00330 at 76.564 kb on - strand, within CA264_00330 at 76.582 kb on - strand, within CA264_00330 at 76.708 kb on - strand, within CA264_00330 at 76.723 kb on + strand, within CA264_00330 at 76.821 kb on - strand, within CA264_00330 at 76.822 kb on + strand, within CA264_00330 at 76.823 kb on - strand, within CA264_00330 at 76.823 kb on - strand, within CA264_00330 at 76.826 kb on + strand, within CA264_00330 at 76.827 kb on - strand, within CA264_00330 at 76.897 kb on + strand at 76.898 kb on - strand at 76.899 kb on + strand at 76.900 kb on - strand at 76.900 kb on - strand at 76.900 kb on - strand at 76.905 kb on - strand at 76.905 kb on - strand at 76.905 kb on - strand at 76.905 kb on - strand at 76.905 kb on - strand at 76.906 kb on + strand at 77.032 kb on + strand at 77.032 kb on + strand at 77.074 kb on + strand, within CA264_00335 at 77.222 kb on + strand, within CA264_00335 at 77.860 kb on - strand, within CA264_00335 at 78.063 kb on + strand, within CA264_00335 at 78.072 kb on + strand, within CA264_00335 at 78.131 kb on + strand at 78.207 kb on + strand at 78.208 kb on - strand at 78.214 kb on + strand at 78.240 kb on - strand at 78.259 kb on + strand at 78.261 kb on + strand at 78.261 kb on + strand at 78.264 kb on + strand at 78.264 kb on + strand at 78.265 kb on - strand at 78.272 kb on + strand at 78.278 kb on + strand at 78.329 kb on + strand at 78.330 kb on - strand at 78.330 kb on - strand at 78.363 kb on + strand at 78.363 kb on + strand at 78.363 kb on + strand at 78.482 kb on + strand at 78.621 kb on + strand, within CA264_00340 at 78.885 kb on + strand, within CA264_00340 at 78.900 kb on + strand, within CA264_00340 at 78.900 kb on + strand, within CA264_00340 at 78.901 kb on - strand, within CA264_00340 at 79.011 kb on + strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.019 kb on - strand, within CA264_00340 at 79.041 kb on + strand, within CA264_00340 at 79.050 kb on + strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.051 kb on - strand, within CA264_00340 at 79.053 kb on - strand, within CA264_00340 at 79.078 kb on + strand, within CA264_00340 at 79.079 kb on - strand, within CA264_00340 at 79.079 kb on - strand, within CA264_00340 at 79.081 kb on - strand, within CA264_00340 at 79.090 kb on - strand, within CA264_00340 at 79.198 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 76,024 - -2.1 76,167 - -0.6 76,207 + +0.4 76,208 - -0.8 76,208 - +0.4 76,211 + -1.6 76,211 + -0.5 76,211 + -1.0 76,326 + CA264_00330 0.18 +0.0 76,327 - CA264_00330 0.18 -1.0 76,419 + CA264_00330 0.31 -0.8 76,424 + CA264_00330 0.31 -1.2 76,564 - CA264_00330 0.51 -1.0 76,582 - CA264_00330 0.53 +0.2 76,708 - CA264_00330 0.70 -1.1 76,723 + CA264_00330 0.72 -0.8 76,821 - CA264_00330 0.86 +0.3 76,822 + CA264_00330 0.86 +0.8 76,823 - CA264_00330 0.86 -0.6 76,823 - CA264_00330 0.86 +0.6 76,826 + CA264_00330 0.86 -1.9 76,827 - CA264_00330 0.86 -2.2 76,897 + -1.2 76,898 - +0.2 76,899 + -0.7 76,900 - -0.5 76,900 - -0.2 76,900 - -1.7 76,905 - +0.1 76,905 - +2.7 76,905 - -0.7 76,905 - +0.6 76,905 - +0.1 76,906 + -0.9 77,032 + -1.6 77,032 + -1.1 77,074 + CA264_00335 0.13 +1.1 77,222 + CA264_00335 0.24 -1.1 77,860 - CA264_00335 0.73 -0.6 78,063 + CA264_00335 0.89 -0.9 78,072 + CA264_00335 0.90 -1.3 78,131 + -1.6 78,207 + -2.3 78,208 - +0.5 78,214 + +0.6 78,240 - -0.7 78,259 + -1.9 78,261 + -2.0 78,261 + -0.9 78,264 + -3.4 78,264 + -0.2 78,265 - -2.8 78,272 + -2.4 78,278 + -4.2 78,329 + +0.1 78,330 - -2.9 78,330 - -3.2 78,363 + -2.6 78,363 + -2.4 78,363 + -3.6 78,482 + -3.6 78,621 + CA264_00340 0.15 -0.9 78,885 + CA264_00340 0.50 -1.2 78,900 + CA264_00340 0.52 -0.1 78,900 + CA264_00340 0.52 -0.2 78,901 - CA264_00340 0.52 -1.9 79,011 + CA264_00340 0.67 -0.2 79,019 - CA264_00340 0.68 -0.9 79,019 - CA264_00340 0.68 -1.2 79,019 - CA264_00340 0.68 -0.8 79,041 + CA264_00340 0.71 +1.1 79,050 + CA264_00340 0.72 +2.1 79,051 - CA264_00340 0.72 -1.9 79,051 - CA264_00340 0.72 -2.0 79,051 - CA264_00340 0.72 -0.6 79,053 - CA264_00340 0.72 -1.9 79,078 + CA264_00340 0.76 +0.3 79,079 - CA264_00340 0.76 -0.5 79,079 - CA264_00340 0.76 +1.1 79,081 - CA264_00340 0.76 -2.0 79,090 - CA264_00340 0.77 +1.1 79,198 - -0.5
Or see this region's nucleotide sequence