Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00320 and CA264_00325 are separated by 108 nucleotides CA264_00325 and CA264_00330 are separated by 422 nucleotides
CA264_00320: CA264_00320 - hypothetical protein, at 74,641 to 75,291
_00320
CA264_00325: CA264_00325 - hypothetical protein, at 75,400 to 75,771
_00325
CA264_00330: CA264_00330 - hypothetical protein, at 76,194 to 76,925
_00330
Position (kb)
75
76 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 74.405 kb on + strand at 74.461 kb on + strand at 74.462 kb on - strand at 74.462 kb on - strand at 74.505 kb on + strand at 74.723 kb on + strand, within CA264_00320 at 74.723 kb on + strand, within CA264_00320 at 74.780 kb on - strand, within CA264_00320 at 74.862 kb on - strand, within CA264_00320 at 74.957 kb on + strand, within CA264_00320 at 74.958 kb on - strand, within CA264_00320 at 74.961 kb on + strand, within CA264_00320 at 74.962 kb on - strand, within CA264_00320 at 75.041 kb on + strand, within CA264_00320 at 75.086 kb on - strand, within CA264_00320 at 75.107 kb on + strand, within CA264_00320 at 75.108 kb on - strand, within CA264_00320 at 75.108 kb on - strand, within CA264_00320 at 75.261 kb on + strand at 75.311 kb on - strand at 75.393 kb on - strand at 75.423 kb on - strand at 75.423 kb on - strand at 75.426 kb on + strand at 75.554 kb on + strand, within CA264_00325 at 75.555 kb on - strand, within CA264_00325 at 75.608 kb on + strand, within CA264_00325 at 75.669 kb on + strand, within CA264_00325 at 75.669 kb on + strand, within CA264_00325 at 75.689 kb on + strand, within CA264_00325 at 75.690 kb on - strand, within CA264_00325 at 75.690 kb on - strand, within CA264_00325 at 75.738 kb on - strand at 75.871 kb on + strand at 75.872 kb on - strand at 76.024 kb on - strand at 76.167 kb on - strand at 76.207 kb on + strand at 76.208 kb on - strand at 76.208 kb on - strand at 76.211 kb on + strand at 76.211 kb on + strand at 76.211 kb on + strand at 76.326 kb on + strand, within CA264_00330 at 76.327 kb on - strand, within CA264_00330 at 76.419 kb on + strand, within CA264_00330 at 76.424 kb on + strand, within CA264_00330 at 76.564 kb on - strand, within CA264_00330 at 76.582 kb on - strand, within CA264_00330 at 76.708 kb on - strand, within CA264_00330 at 76.723 kb on + strand, within CA264_00330
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 74,405 + -0.4 74,461 + -0.4 74,462 - -0.1 74,462 - +1.4 74,505 + -0.7 74,723 + CA264_00320 0.13 -0.9 74,723 + CA264_00320 0.13 -0.1 74,780 - CA264_00320 0.21 -0.5 74,862 - CA264_00320 0.34 +0.7 74,957 + CA264_00320 0.49 +1.1 74,958 - CA264_00320 0.49 -0.3 74,961 + CA264_00320 0.49 -0.3 74,962 - CA264_00320 0.49 -0.6 75,041 + CA264_00320 0.61 -0.7 75,086 - CA264_00320 0.68 +0.8 75,107 + CA264_00320 0.72 +1.1 75,108 - CA264_00320 0.72 +0.4 75,108 - CA264_00320 0.72 -0.4 75,261 + +0.0 75,311 - -0.2 75,393 - -0.4 75,423 - -1.2 75,423 - -0.2 75,426 + -1.6 75,554 + CA264_00325 0.41 -0.5 75,555 - CA264_00325 0.42 +1.1 75,608 + CA264_00325 0.56 -2.9 75,669 + CA264_00325 0.72 -0.6 75,669 + CA264_00325 0.72 -0.9 75,689 + CA264_00325 0.78 -0.9 75,690 - CA264_00325 0.78 +2.1 75,690 - CA264_00325 0.78 +1.8 75,738 - -0.7 75,871 + -0.8 75,872 - -0.7 76,024 - -2.1 76,167 - -0.6 76,207 + +0.4 76,208 - -0.8 76,208 - +0.4 76,211 + -1.6 76,211 + -0.5 76,211 + -1.0 76,326 + CA264_00330 0.18 +0.0 76,327 - CA264_00330 0.18 -1.0 76,419 + CA264_00330 0.31 -0.8 76,424 + CA264_00330 0.31 -1.2 76,564 - CA264_00330 0.51 -1.0 76,582 - CA264_00330 0.53 +0.2 76,708 - CA264_00330 0.70 -1.1 76,723 + CA264_00330 0.72 -0.8
Or see this region's nucleotide sequence