Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22200 and ABID97_RS22205 are separated by 79 nucleotides ABID97_RS22205 and ABID97_RS22210 are separated by 7 nucleotides ABID97_RS22210 and ABID97_RS22215 are separated by 2 nucleotides
ABID97_RS22200: ABID97_RS22200 - hydroxyisourate hydrolase, at 4,599,999 to 4,600,349
_RS22200
ABID97_RS22205: ABID97_RS22205 - GntR family transcriptional regulator, at 4,600,429 to 4,601,103
_RS22205
ABID97_RS22210: ABID97_RS22210 - allantoinase PuuE, at 4,601,111 to 4,602,076
_RS22210
ABID97_RS22215: ABID97_RS22215 - 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, at 4,602,079 to 4,603,857
_RS22215
Position (kb) 4601
4602
4603 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 4600.202 kb on - strand, within ABID97_RS22200 at 4600.279 kb on + strand, within ABID97_RS22200 at 4600.279 kb on + strand, within ABID97_RS22200 at 4600.279 kb on + strand, within ABID97_RS22200 at 4600.280 kb on - strand, within ABID97_RS22200 at 4600.280 kb on - strand, within ABID97_RS22200 at 4600.425 kb on + strand at 4600.425 kb on + strand at 4600.425 kb on + strand at 4600.426 kb on - strand at 4601.228 kb on + strand, within ABID97_RS22210 at 4601.345 kb on + strand, within ABID97_RS22210 at 4601.345 kb on + strand, within ABID97_RS22210 at 4601.346 kb on - strand, within ABID97_RS22210 at 4601.346 kb on - strand, within ABID97_RS22210 at 4601.351 kb on + strand, within ABID97_RS22210 at 4601.520 kb on - strand, within ABID97_RS22210 at 4601.612 kb on + strand, within ABID97_RS22210 at 4601.613 kb on - strand, within ABID97_RS22210 at 4601.657 kb on + strand, within ABID97_RS22210 at 4601.658 kb on - strand, within ABID97_RS22210 at 4601.685 kb on - strand, within ABID97_RS22210 at 4601.687 kb on + strand, within ABID97_RS22210 at 4601.834 kb on + strand, within ABID97_RS22210 at 4602.149 kb on - strand at 4602.415 kb on + strand, within ABID97_RS22215 at 4602.700 kb on + strand, within ABID97_RS22215 at 4602.700 kb on + strand, within ABID97_RS22215 at 4602.701 kb on - strand, within ABID97_RS22215 at 4602.857 kb on - strand, within ABID97_RS22215 at 4603.003 kb on + strand, within ABID97_RS22215
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 4,600,202 - ABID97_RS22200 0.58 -2.5 4,600,279 + ABID97_RS22200 0.80 -3.7 4,600,279 + ABID97_RS22200 0.80 -2.6 4,600,279 + ABID97_RS22200 0.80 -3.2 4,600,280 - ABID97_RS22200 0.80 -3.6 4,600,280 - ABID97_RS22200 0.80 -5.0 4,600,425 + -0.9 4,600,425 + -1.5 4,600,425 + -2.4 4,600,426 - +0.1 4,601,228 + ABID97_RS22210 0.12 -4.1 4,601,345 + ABID97_RS22210 0.24 -3.7 4,601,345 + ABID97_RS22210 0.24 -3.2 4,601,346 - ABID97_RS22210 0.24 -4.6 4,601,346 - ABID97_RS22210 0.24 -1.2 4,601,351 + ABID97_RS22210 0.25 -2.4 4,601,520 - ABID97_RS22210 0.42 -4.0 4,601,612 + ABID97_RS22210 0.52 -2.6 4,601,613 - ABID97_RS22210 0.52 -4.9 4,601,657 + ABID97_RS22210 0.57 -1.4 4,601,658 - ABID97_RS22210 0.57 -0.3 4,601,685 - ABID97_RS22210 0.59 -2.3 4,601,687 + ABID97_RS22210 0.60 -3.3 4,601,834 + ABID97_RS22210 0.75 -3.6 4,602,149 - +0.5 4,602,415 + ABID97_RS22215 0.19 -3.4 4,602,700 + ABID97_RS22215 0.35 -3.1 4,602,700 + ABID97_RS22215 0.35 -4.4 4,602,701 - ABID97_RS22215 0.35 -2.9 4,602,857 - ABID97_RS22215 0.44 -3.4 4,603,003 + ABID97_RS22215 0.52 -3.2
Or see this region's nucleotide sequence