Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS22110 and ABID97_RS22115 are separated by 78 nucleotides ABID97_RS22115 and ABID97_RS22120 are separated by 123 nucleotides
ABID97_RS22110: ABID97_RS22110 - NCS2 family permease, at 4,575,881 to 4,577,287
_RS22110
ABID97_RS22115: ABID97_RS22115 - LysR family transcriptional regulator, at 4,577,366 to 4,578,364
_RS22115
ABID97_RS22120: ABID97_RS22120 - xanthine dehydrogenase molybdopterin binding subunit, at 4,578,488 to 4,580,938
_RS22120
Position (kb)
4577
4578
4579 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4576.481 kb on + strand, within ABID97_RS22110 at 4576.482 kb on - strand, within ABID97_RS22110 at 4576.482 kb on - strand, within ABID97_RS22110 at 4576.482 kb on - strand, within ABID97_RS22110 at 4576.917 kb on + strand, within ABID97_RS22110 at 4576.918 kb on - strand, within ABID97_RS22110 at 4576.927 kb on - strand, within ABID97_RS22110 at 4577.085 kb on + strand, within ABID97_RS22110 at 4577.086 kb on - strand, within ABID97_RS22110 at 4577.309 kb on + strand at 4577.309 kb on + strand at 4577.310 kb on - strand at 4577.526 kb on + strand, within ABID97_RS22115 at 4577.527 kb on - strand, within ABID97_RS22115 at 4577.529 kb on + strand, within ABID97_RS22115 at 4577.529 kb on + strand, within ABID97_RS22115 at 4577.529 kb on + strand, within ABID97_RS22115 at 4577.530 kb on - strand, within ABID97_RS22115 at 4577.530 kb on - strand, within ABID97_RS22115 at 4577.937 kb on + strand, within ABID97_RS22115 at 4578.255 kb on + strand, within ABID97_RS22115 at 4578.255 kb on + strand, within ABID97_RS22115 at 4578.255 kb on + strand, within ABID97_RS22115 at 4578.256 kb on - strand, within ABID97_RS22115 at 4578.442 kb on + strand at 4578.738 kb on + strand, within ABID97_RS22120 at 4578.738 kb on + strand, within ABID97_RS22120 at 4578.739 kb on - strand, within ABID97_RS22120 at 4578.963 kb on + strand, within ABID97_RS22120 at 4578.963 kb on + strand, within ABID97_RS22120 at 4578.963 kb on + strand, within ABID97_RS22120 at 4578.969 kb on + strand, within ABID97_RS22120 at 4578.970 kb on - strand, within ABID97_RS22120 at 4579.023 kb on + strand, within ABID97_RS22120 at 4579.024 kb on - strand, within ABID97_RS22120
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 4,576,481 + ABID97_RS22110 0.43 -0.4 4,576,482 - ABID97_RS22110 0.43 -1.6 4,576,482 - ABID97_RS22110 0.43 -1.2 4,576,482 - ABID97_RS22110 0.43 -2.1 4,576,917 + ABID97_RS22110 0.74 -1.6 4,576,918 - ABID97_RS22110 0.74 -1.4 4,576,927 - ABID97_RS22110 0.74 -1.7 4,577,085 + ABID97_RS22110 0.86 -1.5 4,577,086 - ABID97_RS22110 0.86 -2.1 4,577,309 + -1.5 4,577,309 + +1.2 4,577,310 - -1.3 4,577,526 + ABID97_RS22115 0.16 -2.5 4,577,527 - ABID97_RS22115 0.16 -3.5 4,577,529 + ABID97_RS22115 0.16 -0.1 4,577,529 + ABID97_RS22115 0.16 -1.7 4,577,529 + ABID97_RS22115 0.16 -1.7 4,577,530 - ABID97_RS22115 0.16 -2.9 4,577,530 - ABID97_RS22115 0.16 -1.2 4,577,937 + ABID97_RS22115 0.57 -2.6 4,578,255 + ABID97_RS22115 0.89 -1.2 4,578,255 + ABID97_RS22115 0.89 -1.8 4,578,255 + ABID97_RS22115 0.89 -0.8 4,578,256 - ABID97_RS22115 0.89 +0.0 4,578,442 + -1.9 4,578,738 + ABID97_RS22120 0.10 -2.9 4,578,738 + ABID97_RS22120 0.10 -0.9 4,578,739 - ABID97_RS22120 0.10 -3.6 4,578,963 + ABID97_RS22120 0.19 -2.5 4,578,963 + ABID97_RS22120 0.19 -1.8 4,578,963 + ABID97_RS22120 0.19 -1.8 4,578,969 + ABID97_RS22120 0.20 +0.2 4,578,970 - ABID97_RS22120 0.20 -3.5 4,579,023 + ABID97_RS22120 0.22 -2.4 4,579,024 - ABID97_RS22120 0.22 -0.5
Or see this region's nucleotide sequence