Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21660 and ABID97_RS21665 are separated by 132 nucleotides ABID97_RS21665 and ABID97_RS21670 are separated by 20 nucleotides ABID97_RS21670 and ABID97_RS21675 are separated by 74 nucleotides ABID97_RS21675 and ABID97_RS21680 overlap by 1 nucleotides
ABID97_RS21660: ABID97_RS21660 - hypothetical protein, at 4,481,094 to 4,481,714
_RS21660
ABID97_RS21665: ABID97_RS21665 - pyrimidine/purine nucleoside phosphorylase, at 4,481,847 to 4,482,173
_RS21665
ABID97_RS21670: ABID97_RS21670 - argininosuccinate synthase, at 4,482,194 to 4,483,534
_RS21670
ABID97_RS21675: ABID97_RS21675 - hypothetical protein, at 4,483,609 to 4,484,448
_RS21675
ABID97_RS21680: ABID97_RS21680 - UDP-N-acetylmuramate dehydrogenase, at 4,484,448 to 4,485,500
_RS21680
Position (kb) 4482
4483
4484 Strain fitness (log2 ratio) -1
0
1
2 at 4481.247 kb on + strand, within ABID97_RS21660 at 4481.248 kb on - strand, within ABID97_RS21660 at 4481.260 kb on - strand, within ABID97_RS21660 at 4481.260 kb on - strand, within ABID97_RS21660 at 4481.260 kb on - strand, within ABID97_RS21660 at 4481.280 kb on + strand, within ABID97_RS21660 at 4481.338 kb on - strand, within ABID97_RS21660 at 4481.427 kb on + strand, within ABID97_RS21660 at 4481.428 kb on - strand, within ABID97_RS21660 at 4481.451 kb on + strand, within ABID97_RS21660 at 4481.469 kb on + strand, within ABID97_RS21660 at 4481.551 kb on - strand, within ABID97_RS21660 at 4481.551 kb on - strand, within ABID97_RS21660 at 4481.551 kb on - strand, within ABID97_RS21660 at 4481.571 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.619 kb on + strand, within ABID97_RS21660 at 4481.619 kb on + strand, within ABID97_RS21660 at 4481.619 kb on + strand, within ABID97_RS21660 at 4483.532 kb on + strand at 4483.829 kb on + strand, within ABID97_RS21675 at 4483.829 kb on + strand, within ABID97_RS21675 at 4484.176 kb on - strand, within ABID97_RS21675 at 4484.176 kb on - strand, within ABID97_RS21675 at 4484.270 kb on + strand, within ABID97_RS21675 at 4484.270 kb on + strand, within ABID97_RS21675 at 4484.271 kb on - strand, within ABID97_RS21675 at 4484.271 kb on - strand, within ABID97_RS21675
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 4,481,247 + ABID97_RS21660 0.25 -0.9 4,481,248 - ABID97_RS21660 0.25 +0.4 4,481,260 - ABID97_RS21660 0.27 -0.3 4,481,260 - ABID97_RS21660 0.27 -0.2 4,481,260 - ABID97_RS21660 0.27 +0.6 4,481,280 + ABID97_RS21660 0.30 -0.1 4,481,338 - ABID97_RS21660 0.39 -0.7 4,481,427 + ABID97_RS21660 0.54 -0.9 4,481,428 - ABID97_RS21660 0.54 +1.2 4,481,451 + ABID97_RS21660 0.57 -1.0 4,481,469 + ABID97_RS21660 0.60 -0.3 4,481,551 - ABID97_RS21660 0.74 -0.5 4,481,551 - ABID97_RS21660 0.74 +0.8 4,481,551 - ABID97_RS21660 0.74 -0.0 4,481,571 + ABID97_RS21660 0.77 -0.2 4,481,601 + ABID97_RS21660 0.82 +0.7 4,481,601 + ABID97_RS21660 0.82 -0.4 4,481,601 + ABID97_RS21660 0.82 +0.5 4,481,601 + ABID97_RS21660 0.82 +0.4 4,481,601 + ABID97_RS21660 0.82 -0.2 4,481,601 + ABID97_RS21660 0.82 +0.5 4,481,601 + ABID97_RS21660 0.82 +0.1 4,481,601 + ABID97_RS21660 0.82 -0.5 4,481,601 + ABID97_RS21660 0.82 -0.0 4,481,602 - ABID97_RS21660 0.82 +0.8 4,481,602 - ABID97_RS21660 0.82 -0.2 4,481,602 - ABID97_RS21660 0.82 -1.0 4,481,602 - ABID97_RS21660 0.82 -0.3 4,481,602 - ABID97_RS21660 0.82 -0.0 4,481,619 + ABID97_RS21660 0.85 +2.2 4,481,619 + ABID97_RS21660 0.85 +0.1 4,481,619 + ABID97_RS21660 0.85 +0.9 4,483,532 + +0.0 4,483,829 + ABID97_RS21675 0.26 -0.5 4,483,829 + ABID97_RS21675 0.26 -0.2 4,484,176 - ABID97_RS21675 0.68 -0.2 4,484,176 - ABID97_RS21675 0.68 -0.2 4,484,270 + ABID97_RS21675 0.79 +0.6 4,484,270 + ABID97_RS21675 0.79 +0.3 4,484,271 - ABID97_RS21675 0.79 -0.1 4,484,271 - ABID97_RS21675 0.79 -0.5
Or see this region's nucleotide sequence