Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS19480 and ABID97_RS19485 are separated by 105 nucleotides ABID97_RS19485 and ABID97_RS19490 are separated by 144 nucleotides
ABID97_RS19480: ABID97_RS19480 - LysR family transcriptional regulator, at 4,020,799 to 4,021,743
_RS19480
ABID97_RS19485: ABID97_RS19485 - CoA-acylating methylmalonate-semialdehyde dehydrogenase, at 4,021,849 to 4,023,357
_RS19485
ABID97_RS19490: ABID97_RS19490 - class I SAM-dependent methyltransferase, at 4,023,502 to 4,024,347
_RS19490
Position (kb)
4021
4022
4023
4024 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4020.890 kb on - strand at 4020.896 kb on + strand, within ABID97_RS19480 at 4021.214 kb on + strand, within ABID97_RS19480 at 4021.671 kb on - strand at 4021.790 kb on + strand at 4022.016 kb on + strand, within ABID97_RS19485 at 4022.545 kb on + strand, within ABID97_RS19485 at 4022.546 kb on - strand, within ABID97_RS19485 at 4022.546 kb on - strand, within ABID97_RS19485 at 4022.551 kb on + strand, within ABID97_RS19485 at 4022.855 kb on - strand, within ABID97_RS19485 at 4022.855 kb on - strand, within ABID97_RS19485 at 4022.998 kb on + strand, within ABID97_RS19485 at 4022.998 kb on + strand, within ABID97_RS19485 at 4022.998 kb on + strand, within ABID97_RS19485 at 4023.250 kb on + strand at 4023.274 kb on + strand at 4023.356 kb on - strand at 4023.356 kb on - strand at 4023.434 kb on - strand at 4023.691 kb on + strand, within ABID97_RS19490 at 4023.691 kb on + strand, within ABID97_RS19490 at 4023.692 kb on - strand, within ABID97_RS19490 at 4023.797 kb on - strand, within ABID97_RS19490 at 4024.009 kb on + strand, within ABID97_RS19490 at 4024.009 kb on + strand, within ABID97_RS19490 at 4024.010 kb on - strand, within ABID97_RS19490 at 4024.225 kb on + strand, within ABID97_RS19490 at 4024.226 kb on - strand, within ABID97_RS19490 at 4024.303 kb on + strand at 4024.304 kb on - strand at 4024.346 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 4,020,890 - -0.2 4,020,896 + ABID97_RS19480 0.10 -0.3 4,021,214 + ABID97_RS19480 0.44 -0.0 4,021,671 - +0.6 4,021,790 + -1.1 4,022,016 + ABID97_RS19485 0.11 +0.3 4,022,545 + ABID97_RS19485 0.46 +0.2 4,022,546 - ABID97_RS19485 0.46 +0.6 4,022,546 - ABID97_RS19485 0.46 -0.2 4,022,551 + ABID97_RS19485 0.47 +0.8 4,022,855 - ABID97_RS19485 0.67 +2.1 4,022,855 - ABID97_RS19485 0.67 -0.1 4,022,998 + ABID97_RS19485 0.76 -0.3 4,022,998 + ABID97_RS19485 0.76 +0.3 4,022,998 + ABID97_RS19485 0.76 -0.2 4,023,250 + +0.2 4,023,274 + -0.6 4,023,356 - +1.5 4,023,356 - -0.0 4,023,434 - +0.6 4,023,691 + ABID97_RS19490 0.22 +0.8 4,023,691 + ABID97_RS19490 0.22 +0.4 4,023,692 - ABID97_RS19490 0.22 -0.0 4,023,797 - ABID97_RS19490 0.35 -0.8 4,024,009 + ABID97_RS19490 0.60 -0.7 4,024,009 + ABID97_RS19490 0.60 -0.0 4,024,010 - ABID97_RS19490 0.60 +0.0 4,024,225 + ABID97_RS19490 0.85 -2.5 4,024,226 - ABID97_RS19490 0.86 +0.0 4,024,303 + -0.6 4,024,304 - -0.3 4,024,346 - +0.2
Or see this region's nucleotide sequence