Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15840 and ABID97_RS15845 are separated by 121 nucleotides ABID97_RS15845 and ABID97_RS15850 are separated by 12 nucleotides ABID97_RS15850 and ABID97_RS15855 are separated by 21 nucleotides ABID97_RS15855 and ABID97_RS15860 are separated by 18 nucleotides
ABID97_RS15840: ABID97_RS15840 - aminotransferase class V-fold PLP-dependent enzyme, at 3,281,635 to 3,282,879
_RS15840
ABID97_RS15845: ABID97_RS15845 - GntR family transcriptional regulator, at 3,283,001 to 3,283,696
_RS15845
ABID97_RS15850: ABID97_RS15850 - FAD-linked oxidase C-terminal domain-containing protein, at 3,283,709 to 3,286,786
_RS15850
ABID97_RS15855: ABID97_RS15855 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 3,286,808 to 3,287,365
_RS15855
ABID97_RS15860: ABID97_RS15860 - pyridoxamine 5'-phosphate oxidase family protein, at 3,287,384 to 3,287,998
_RS15860
Position (kb) 3283
3284
3285
3286
3287 Strain fitness (log2 ratio) -1
0
1 at 3282.935 kb on + strand at 3283.164 kb on + strand, within ABID97_RS15845 at 3283.397 kb on + strand, within ABID97_RS15845 at 3283.467 kb on - strand, within ABID97_RS15845 at 3283.847 kb on + strand at 3283.847 kb on + strand at 3284.519 kb on + strand, within ABID97_RS15850 at 3284.519 kb on + strand, within ABID97_RS15850 at 3284.520 kb on - strand, within ABID97_RS15850 at 3284.991 kb on - strand, within ABID97_RS15850 at 3285.044 kb on + strand, within ABID97_RS15850 at 3285.812 kb on + strand, within ABID97_RS15850 at 3286.785 kb on - strand at 3286.785 kb on - strand at 3287.147 kb on + strand, within ABID97_RS15855 at 3287.483 kb on + strand, within ABID97_RS15860 at 3287.483 kb on + strand, within ABID97_RS15860
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 3,282,935 + +0.2 3,283,164 + ABID97_RS15845 0.23 +0.3 3,283,397 + ABID97_RS15845 0.57 -0.3 3,283,467 - ABID97_RS15845 0.67 -0.4 3,283,847 + +0.5 3,283,847 + -0.0 3,284,519 + ABID97_RS15850 0.26 +0.2 3,284,519 + ABID97_RS15850 0.26 +0.2 3,284,520 - ABID97_RS15850 0.26 +1.4 3,284,991 - ABID97_RS15850 0.42 +0.2 3,285,044 + ABID97_RS15850 0.43 -0.5 3,285,812 + ABID97_RS15850 0.68 -1.1 3,286,785 - -0.6 3,286,785 - -0.1 3,287,147 + ABID97_RS15855 0.61 -0.0 3,287,483 + ABID97_RS15860 0.16 +0.3 3,287,483 + ABID97_RS15860 0.16 -0.7
Or see this region's nucleotide sequence