Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13685 and ABID97_RS13690 are separated by 322 nucleotides ABID97_RS13690 and ABID97_RS13695 are separated by 18 nucleotides ABID97_RS13695 and ABID97_RS13700 are separated by 862 nucleotides
ABID97_RS13685: ABID97_RS13685 - hydrogenase small subunit, at 2,848,346 to 2,849,437
_RS13685
ABID97_RS13690: ABID97_RS13690 - hypothetical protein, at 2,849,760 to 2,849,978
_RS13690
ABID97_RS13695: ABID97_RS13695 - hypothetical protein, at 2,849,997 to 2,850,314
_RS13695
ABID97_RS13700: ABID97_RS13700 - hypothetical protein, at 2,851,177 to 2,851,899
_RS13700
Position (kb)
2849
2850
2851 Strain fitness (log2 ratio)
-1
0
1 at 2849.100 kb on + strand, within ABID97_RS13685 at 2849.101 kb on - strand, within ABID97_RS13685 at 2849.101 kb on - strand, within ABID97_RS13685 at 2849.101 kb on - strand, within ABID97_RS13685 at 2849.112 kb on + strand, within ABID97_RS13685 at 2849.113 kb on - strand, within ABID97_RS13685 at 2849.377 kb on - strand at 2849.809 kb on + strand, within ABID97_RS13690 at 2849.996 kb on + strand at 2850.123 kb on + strand, within ABID97_RS13695 at 2850.123 kb on + strand, within ABID97_RS13695 at 2850.124 kb on - strand, within ABID97_RS13695 at 2850.539 kb on + strand at 2850.596 kb on - strand at 2850.596 kb on - strand at 2850.664 kb on + strand at 2850.665 kb on - strand at 2850.672 kb on - strand at 2850.702 kb on - strand at 2850.777 kb on - strand at 2850.811 kb on + strand at 2850.822 kb on - strand at 2850.858 kb on + strand at 2850.913 kb on + strand at 2851.076 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 2,849,100 + ABID97_RS13685 0.69 -0.8 2,849,101 - ABID97_RS13685 0.69 -1.2 2,849,101 - ABID97_RS13685 0.69 +1.6 2,849,101 - ABID97_RS13685 0.69 -0.9 2,849,112 + ABID97_RS13685 0.70 -0.1 2,849,113 - ABID97_RS13685 0.70 +0.2 2,849,377 - +0.1 2,849,809 + ABID97_RS13690 0.22 +0.5 2,849,996 + +0.4 2,850,123 + ABID97_RS13695 0.40 -0.3 2,850,123 + ABID97_RS13695 0.40 +0.1 2,850,124 - ABID97_RS13695 0.40 +0.2 2,850,539 + +0.3 2,850,596 - +1.0 2,850,596 - +0.3 2,850,664 + -0.6 2,850,665 - -0.0 2,850,672 - -0.4 2,850,702 - +0.1 2,850,777 - -0.2 2,850,811 + +0.1 2,850,822 - +0.0 2,850,858 + -0.2 2,850,913 + +0.2 2,851,076 + +0.1
Or see this region's nucleotide sequence