Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS11055 and ABID97_RS11060 are separated by 11 nucleotides ABID97_RS11060 and ABID97_RS11065 are separated by 10 nucleotides
ABID97_RS11055: ABID97_RS11055 - sugar phosphate isomerase/epimerase family protein, at 2,287,194 to 2,288,072
_RS11055
ABID97_RS11060: ABID97_RS11060 - dihydrodipicolinate synthase family protein, at 2,288,084 to 2,289,271
_RS11060
ABID97_RS11065: ABID97_RS11065 - Gfo/Idh/MocA family oxidoreductase, at 2,289,282 to 2,290,445
_RS11065
Position (kb)
2288
2289
2290 Strain fitness (log2 ratio)
-1
0
1 at 2287.144 kb on + strand at 2287.195 kb on + strand at 2287.196 kb on - strand at 2287.221 kb on - strand at 2287.414 kb on + strand, within ABID97_RS11055 at 2287.483 kb on + strand, within ABID97_RS11055 at 2287.483 kb on + strand, within ABID97_RS11055 at 2287.484 kb on - strand, within ABID97_RS11055 at 2287.484 kb on - strand, within ABID97_RS11055 at 2287.484 kb on - strand, within ABID97_RS11055 at 2287.484 kb on - strand, within ABID97_RS11055 at 2287.700 kb on - strand, within ABID97_RS11055 at 2288.286 kb on + strand, within ABID97_RS11060 at 2288.287 kb on - strand, within ABID97_RS11060 at 2288.493 kb on + strand, within ABID97_RS11060 at 2288.494 kb on - strand, within ABID97_RS11060 at 2288.515 kb on - strand, within ABID97_RS11060 at 2289.389 kb on - strand at 2289.733 kb on + strand, within ABID97_RS11065
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 2,287,144 + +0.7 2,287,195 + -0.1 2,287,196 - +1.1 2,287,221 - +0.1 2,287,414 + ABID97_RS11055 0.25 -0.4 2,287,483 + ABID97_RS11055 0.33 -0.4 2,287,483 + ABID97_RS11055 0.33 -0.6 2,287,484 - ABID97_RS11055 0.33 +0.7 2,287,484 - ABID97_RS11055 0.33 +0.6 2,287,484 - ABID97_RS11055 0.33 -0.6 2,287,484 - ABID97_RS11055 0.33 +0.2 2,287,700 - ABID97_RS11055 0.58 +0.6 2,288,286 + ABID97_RS11060 0.17 -0.2 2,288,287 - ABID97_RS11060 0.17 +0.0 2,288,493 + ABID97_RS11060 0.34 +0.5 2,288,494 - ABID97_RS11060 0.35 +0.1 2,288,515 - ABID97_RS11060 0.36 +0.6 2,289,389 - +0.0 2,289,733 + ABID97_RS11065 0.39 +0.4
Or see this region's nucleotide sequence