Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS10145 and ABID97_RS10150 are separated by 42 nucleotides ABID97_RS10150 and ABID97_RS10155 are separated by 12 nucleotides ABID97_RS10155 and ABID97_RS10160 are separated by 59 nucleotides
ABID97_RS10145: ABID97_RS10145 - SRPBCC domain-containing protein, at 2,106,152 to 2,107,198
_RS10145
ABID97_RS10150: ABID97_RS10150 - methyltransferase domain-containing protein, at 2,107,241 to 2,108,206
_RS10150
ABID97_RS10155: ABID97_RS10155 - DUF393 domain-containing protein, at 2,108,219 to 2,108,641
_RS10155
ABID97_RS10160: ABID97_RS10160 - MarR family transcriptional regulator, at 2,108,701 to 2,109,288
_RS10160
Position (kb)
2107
2108
2109 Strain fitness (log2 ratio)
-1
0
1
2 at 2106.249 kb on + strand at 2106.328 kb on - strand, within ABID97_RS10145 at 2106.351 kb on + strand, within ABID97_RS10145 at 2106.351 kb on + strand, within ABID97_RS10145 at 2106.352 kb on - strand, within ABID97_RS10145 at 2106.352 kb on - strand, within ABID97_RS10145 at 2106.352 kb on - strand, within ABID97_RS10145 at 2106.858 kb on + strand, within ABID97_RS10145 at 2106.858 kb on + strand, within ABID97_RS10145 at 2106.916 kb on - strand, within ABID97_RS10145 at 2106.916 kb on - strand, within ABID97_RS10145 at 2106.918 kb on + strand, within ABID97_RS10145 at 2106.919 kb on - strand, within ABID97_RS10145 at 2106.954 kb on + strand, within ABID97_RS10145 at 2106.954 kb on + strand, within ABID97_RS10145 at 2106.954 kb on + strand, within ABID97_RS10145 at 2106.955 kb on - strand, within ABID97_RS10145 at 2106.955 kb on - strand, within ABID97_RS10145 at 2107.273 kb on - strand at 2107.314 kb on + strand at 2107.314 kb on + strand at 2107.839 kb on + strand, within ABID97_RS10150 at 2107.839 kb on + strand, within ABID97_RS10150 at 2107.840 kb on - strand, within ABID97_RS10150 at 2107.840 kb on - strand, within ABID97_RS10150 at 2108.049 kb on + strand, within ABID97_RS10150 at 2108.049 kb on + strand, within ABID97_RS10150 at 2108.049 kb on + strand, within ABID97_RS10150 at 2108.050 kb on - strand, within ABID97_RS10150 at 2108.050 kb on - strand, within ABID97_RS10150 at 2108.095 kb on - strand, within ABID97_RS10150 at 2108.095 kb on - strand, within ABID97_RS10150
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 2,106,249 + -0.7 2,106,328 - ABID97_RS10145 0.17 +0.3 2,106,351 + ABID97_RS10145 0.19 +0.0 2,106,351 + ABID97_RS10145 0.19 +0.5 2,106,352 - ABID97_RS10145 0.19 +0.5 2,106,352 - ABID97_RS10145 0.19 -0.4 2,106,352 - ABID97_RS10145 0.19 +0.3 2,106,858 + ABID97_RS10145 0.67 +0.1 2,106,858 + ABID97_RS10145 0.67 +1.6 2,106,916 - ABID97_RS10145 0.73 -0.4 2,106,916 - ABID97_RS10145 0.73 +0.0 2,106,918 + ABID97_RS10145 0.73 +0.2 2,106,919 - ABID97_RS10145 0.73 +0.8 2,106,954 + ABID97_RS10145 0.77 +0.0 2,106,954 + ABID97_RS10145 0.77 -0.1 2,106,954 + ABID97_RS10145 0.77 +1.6 2,106,955 - ABID97_RS10145 0.77 -0.7 2,106,955 - ABID97_RS10145 0.77 -0.1 2,107,273 - +0.1 2,107,314 + -0.2 2,107,314 + +0.0 2,107,839 + ABID97_RS10150 0.62 -1.4 2,107,839 + ABID97_RS10150 0.62 -0.4 2,107,840 - ABID97_RS10150 0.62 +0.7 2,107,840 - ABID97_RS10150 0.62 +1.9 2,108,049 + ABID97_RS10150 0.84 -0.2 2,108,049 + ABID97_RS10150 0.84 +0.7 2,108,049 + ABID97_RS10150 0.84 +2.1 2,108,050 - ABID97_RS10150 0.84 +0.8 2,108,050 - ABID97_RS10150 0.84 -0.1 2,108,095 - ABID97_RS10150 0.88 +0.6 2,108,095 - ABID97_RS10150 0.88 +0.6
Or see this region's nucleotide sequence