Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03655 and ABID97_RS03660 are separated by 29 nucleotides ABID97_RS03660 and ABID97_RS03665 are separated by 87 nucleotides ABID97_RS03665 and ABID97_RS03670 are separated by 10 nucleotides
ABID97_RS03655: ABID97_RS03655 - glycolate oxidase subunit GlcE, at 752,648 to 753,775
_RS03655
ABID97_RS03660: ABID97_RS03660 - glycolate oxidase subunit GlcF, at 753,805 to 755,037
_RS03660
ABID97_RS03665: ABID97_RS03665 - carboxypeptidase regulatory-like domain-containing protein, at 755,125 to 755,556
_RS03665
ABID97_RS03670: ABID97_RS03670 - glutathione peroxidase, at 755,567 to 756,055
_RS03670
Position (kb) 753
754
755
756 Strain fitness (log2 ratio) -1
0
1
2 at 752.805 kb on - strand, within ABID97_RS03655 at 753.002 kb on + strand, within ABID97_RS03655 at 753.916 kb on + strand at 753.917 kb on - strand at 753.917 kb on - strand at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.961 kb on + strand, within ABID97_RS03660 at 753.962 kb on - strand, within ABID97_RS03660 at 753.962 kb on - strand, within ABID97_RS03660 at 753.962 kb on - strand, within ABID97_RS03660 at 754.075 kb on + strand, within ABID97_RS03660 at 754.604 kb on - strand, within ABID97_RS03660 at 754.604 kb on - strand, within ABID97_RS03660 at 754.849 kb on + strand, within ABID97_RS03660 at 754.850 kb on - strand, within ABID97_RS03660 at 755.260 kb on + strand, within ABID97_RS03665 at 755.260 kb on + strand, within ABID97_RS03665 at 755.260 kb on + strand, within ABID97_RS03665 at 755.261 kb on - strand, within ABID97_RS03665 at 755.360 kb on - strand, within ABID97_RS03665 at 755.464 kb on + strand, within ABID97_RS03665 at 755.737 kb on - strand, within ABID97_RS03670 at 755.799 kb on + strand, within ABID97_RS03670 at 755.800 kb on - strand, within ABID97_RS03670 at 755.901 kb on + strand, within ABID97_RS03670 at 755.991 kb on + strand, within ABID97_RS03670 at 755.991 kb on + strand, within ABID97_RS03670 at 755.991 kb on + strand, within ABID97_RS03670 at 755.992 kb on - strand, within ABID97_RS03670 at 755.992 kb on - strand, within ABID97_RS03670
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 752,805 - ABID97_RS03655 0.14 +1.7 753,002 + ABID97_RS03655 0.31 +0.2 753,916 + +0.4 753,917 - +0.2 753,917 - +1.9 753,961 + ABID97_RS03660 0.13 +0.5 753,961 + ABID97_RS03660 0.13 +1.5 753,961 + ABID97_RS03660 0.13 +0.6 753,961 + ABID97_RS03660 0.13 +0.1 753,961 + ABID97_RS03660 0.13 +0.1 753,962 - ABID97_RS03660 0.13 -0.1 753,962 - ABID97_RS03660 0.13 -0.7 753,962 - ABID97_RS03660 0.13 +0.4 754,075 + ABID97_RS03660 0.22 +0.1 754,604 - ABID97_RS03660 0.65 -0.1 754,604 - ABID97_RS03660 0.65 +0.6 754,849 + ABID97_RS03660 0.85 +0.2 754,850 - ABID97_RS03660 0.85 +0.6 755,260 + ABID97_RS03665 0.31 -1.0 755,260 + ABID97_RS03665 0.31 -0.4 755,260 + ABID97_RS03665 0.31 -0.1 755,261 - ABID97_RS03665 0.31 -0.3 755,360 - ABID97_RS03665 0.54 -0.1 755,464 + ABID97_RS03665 0.78 +0.5 755,737 - ABID97_RS03670 0.35 -0.3 755,799 + ABID97_RS03670 0.47 +1.0 755,800 - ABID97_RS03670 0.48 -0.3 755,901 + ABID97_RS03670 0.68 +0.2 755,991 + ABID97_RS03670 0.87 -0.2 755,991 + ABID97_RS03670 0.87 +0.2 755,991 + ABID97_RS03670 0.87 +0.4 755,992 - ABID97_RS03670 0.87 -0.7 755,992 - ABID97_RS03670 0.87 -0.4
Or see this region's nucleotide sequence