Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02970 and ABID97_RS02975 are separated by 87 nucleotides ABID97_RS02975 and ABID97_RS02980 are separated by 114 nucleotides ABID97_RS02980 and ABID97_RS02985 are separated by 181 nucleotides ABID97_RS02985 and ABID97_RS02990 are separated by 208 nucleotides
ABID97_RS02970: ABID97_RS02970 - RcnB family protein, at 603,767 to 604,273
_RS02970
ABID97_RS02975: ABID97_RS02975 - hypothetical protein, at 604,361 to 604,621
_RS02975
ABID97_RS02980: ABID97_RS02980 - CysB family HTH-type transcriptional regulator, at 604,736 to 605,680
_RS02980
ABID97_RS02985: ABID97_RS02985 - TetR family transcriptional regulator C-terminal domain-containing protein, at 605,862 to 606,464
_RS02985
ABID97_RS02990: ABID97_RS02990 - alpha/beta fold hydrolase, at 606,673 to 607,593
_RS02990
Position (kb) 604
605
606 Strain fitness (log2 ratio) -1
0
1 at 604.005 kb on - strand, within ABID97_RS02970 at 604.022 kb on + strand, within ABID97_RS02970 at 604.037 kb on + strand, within ABID97_RS02970 at 604.038 kb on - strand, within ABID97_RS02970 at 604.136 kb on + strand, within ABID97_RS02970 at 604.136 kb on + strand, within ABID97_RS02970 at 604.136 kb on + strand, within ABID97_RS02970 at 604.136 kb on + strand, within ABID97_RS02970 at 604.136 kb on + strand, within ABID97_RS02970 at 604.136 kb on + strand, within ABID97_RS02970 at 604.137 kb on - strand, within ABID97_RS02970 at 604.137 kb on - strand, within ABID97_RS02970 at 604.151 kb on + strand, within ABID97_RS02970 at 604.161 kb on - strand, within ABID97_RS02970 at 604.214 kb on + strand, within ABID97_RS02970 at 604.215 kb on - strand, within ABID97_RS02970 at 604.215 kb on - strand, within ABID97_RS02970 at 604.215 kb on - strand, within ABID97_RS02970 at 604.271 kb on + strand at 604.272 kb on - strand at 604.272 kb on - strand at 604.461 kb on + strand, within ABID97_RS02975 at 604.461 kb on + strand, within ABID97_RS02975 at 604.462 kb on - strand, within ABID97_RS02975 at 604.462 kb on - strand, within ABID97_RS02975 at 604.462 kb on - strand, within ABID97_RS02975 at 604.462 kb on - strand, within ABID97_RS02975 at 604.462 kb on - strand, within ABID97_RS02975 at 604.462 kb on - strand, within ABID97_RS02975 at 604.462 kb on - strand, within ABID97_RS02975 at 604.662 kb on + strand at 604.662 kb on + strand at 604.663 kb on - strand at 604.663 kb on - strand at 604.746 kb on + strand at 604.830 kb on + strand at 604.831 kb on - strand, within ABID97_RS02980 at 604.831 kb on - strand, within ABID97_RS02980 at 604.836 kb on + strand, within ABID97_RS02980 at 604.836 kb on + strand, within ABID97_RS02980 at 604.836 kb on + strand, within ABID97_RS02980 at 604.836 kb on + strand, within ABID97_RS02980 at 604.836 kb on + strand, within ABID97_RS02980 at 604.836 kb on + strand, within ABID97_RS02980 at 604.836 kb on + strand, within ABID97_RS02980 at 604.837 kb on - strand, within ABID97_RS02980 at 604.837 kb on - strand, within ABID97_RS02980 at 604.837 kb on - strand, within ABID97_RS02980 at 604.837 kb on - strand, within ABID97_RS02980 at 604.837 kb on - strand, within ABID97_RS02980 at 604.848 kb on + strand, within ABID97_RS02980 at 604.848 kb on + strand, within ABID97_RS02980 at 604.848 kb on + strand, within ABID97_RS02980 at 604.848 kb on + strand, within ABID97_RS02980 at 604.848 kb on + strand, within ABID97_RS02980 at 604.849 kb on - strand, within ABID97_RS02980 at 604.849 kb on - strand, within ABID97_RS02980 at 604.849 kb on - strand, within ABID97_RS02980 at 604.941 kb on + strand, within ABID97_RS02980 at 604.941 kb on + strand, within ABID97_RS02980 at 604.986 kb on + strand, within ABID97_RS02980 at 604.986 kb on + strand, within ABID97_RS02980 at 604.986 kb on + strand, within ABID97_RS02980 at 604.986 kb on + strand, within ABID97_RS02980 at 604.987 kb on - strand, within ABID97_RS02980 at 604.987 kb on - strand, within ABID97_RS02980 at 604.987 kb on - strand, within ABID97_RS02980 at 604.987 kb on - strand, within ABID97_RS02980 at 604.987 kb on - strand, within ABID97_RS02980 at 604.987 kb on - strand, within ABID97_RS02980 at 605.094 kb on + strand, within ABID97_RS02980 at 605.094 kb on + strand, within ABID97_RS02980 at 605.095 kb on - strand, within ABID97_RS02980 at 605.746 kb on - strand at 606.054 kb on + strand, within ABID97_RS02985 at 606.055 kb on - strand, within ABID97_RS02985 at 606.055 kb on - strand, within ABID97_RS02985 at 606.186 kb on + strand, within ABID97_RS02985 at 606.186 kb on + strand, within ABID97_RS02985 at 606.186 kb on + strand, within ABID97_RS02985 at 606.186 kb on + strand, within ABID97_RS02985 at 606.186 kb on + strand, within ABID97_RS02985 at 606.186 kb on + strand, within ABID97_RS02985 at 606.186 kb on + strand, within ABID97_RS02985 at 606.187 kb on - strand, within ABID97_RS02985 at 606.187 kb on - strand, within ABID97_RS02985 at 606.187 kb on - strand, within ABID97_RS02985 at 606.453 kb on + strand at 606.573 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 604,005 - ABID97_RS02970 0.47 +1.0 604,022 + ABID97_RS02970 0.50 +0.1 604,037 + ABID97_RS02970 0.53 +0.6 604,038 - ABID97_RS02970 0.53 +0.1 604,136 + ABID97_RS02970 0.73 -0.2 604,136 + ABID97_RS02970 0.73 -0.4 604,136 + ABID97_RS02970 0.73 +0.0 604,136 + ABID97_RS02970 0.73 -0.2 604,136 + ABID97_RS02970 0.73 -1.2 604,136 + ABID97_RS02970 0.73 +0.2 604,137 - ABID97_RS02970 0.73 -0.2 604,137 - ABID97_RS02970 0.73 -1.0 604,151 + ABID97_RS02970 0.76 -0.3 604,161 - ABID97_RS02970 0.78 +0.2 604,214 + ABID97_RS02970 0.88 +0.4 604,215 - ABID97_RS02970 0.88 +0.1 604,215 - ABID97_RS02970 0.88 +1.4 604,215 - ABID97_RS02970 0.88 +0.2 604,271 + -0.1 604,272 - -0.3 604,272 - +0.2 604,461 + ABID97_RS02975 0.38 -0.9 604,461 + ABID97_RS02975 0.38 -0.0 604,462 - ABID97_RS02975 0.39 +0.8 604,462 - ABID97_RS02975 0.39 -0.3 604,462 - ABID97_RS02975 0.39 -0.8 604,462 - ABID97_RS02975 0.39 -0.0 604,462 - ABID97_RS02975 0.39 -0.6 604,462 - ABID97_RS02975 0.39 -0.8 604,462 - ABID97_RS02975 0.39 -0.9 604,662 + -0.4 604,662 + -0.9 604,663 - -0.2 604,663 - -0.4 604,746 + -1.2 604,830 + +0.4 604,831 - ABID97_RS02980 0.10 -0.2 604,831 - ABID97_RS02980 0.10 -0.5 604,836 + ABID97_RS02980 0.11 +0.1 604,836 + ABID97_RS02980 0.11 +0.3 604,836 + ABID97_RS02980 0.11 +1.1 604,836 + ABID97_RS02980 0.11 -0.5 604,836 + ABID97_RS02980 0.11 -0.3 604,836 + ABID97_RS02980 0.11 +0.0 604,836 + ABID97_RS02980 0.11 +0.6 604,837 - ABID97_RS02980 0.11 -0.5 604,837 - ABID97_RS02980 0.11 -0.2 604,837 - ABID97_RS02980 0.11 +0.0 604,837 - ABID97_RS02980 0.11 -0.7 604,837 - ABID97_RS02980 0.11 -0.8 604,848 + ABID97_RS02980 0.12 -1.2 604,848 + ABID97_RS02980 0.12 -0.5 604,848 + ABID97_RS02980 0.12 -0.3 604,848 + ABID97_RS02980 0.12 +0.3 604,848 + ABID97_RS02980 0.12 +1.2 604,849 - ABID97_RS02980 0.12 -0.3 604,849 - ABID97_RS02980 0.12 -0.2 604,849 - ABID97_RS02980 0.12 -0.9 604,941 + ABID97_RS02980 0.22 -0.5 604,941 + ABID97_RS02980 0.22 -0.0 604,986 + ABID97_RS02980 0.26 -0.0 604,986 + ABID97_RS02980 0.26 -1.3 604,986 + ABID97_RS02980 0.26 -0.7 604,986 + ABID97_RS02980 0.26 -1.0 604,987 - ABID97_RS02980 0.27 +1.2 604,987 - ABID97_RS02980 0.27 -0.3 604,987 - ABID97_RS02980 0.27 -0.4 604,987 - ABID97_RS02980 0.27 -0.3 604,987 - ABID97_RS02980 0.27 -0.0 604,987 - ABID97_RS02980 0.27 +0.3 605,094 + ABID97_RS02980 0.38 +0.0 605,094 + ABID97_RS02980 0.38 +0.1 605,095 - ABID97_RS02980 0.38 -0.2 605,746 - +0.5 606,054 + ABID97_RS02985 0.32 -1.0 606,055 - ABID97_RS02985 0.32 -0.3 606,055 - ABID97_RS02985 0.32 -0.0 606,186 + ABID97_RS02985 0.54 -1.4 606,186 + ABID97_RS02985 0.54 -1.0 606,186 + ABID97_RS02985 0.54 -1.2 606,186 + ABID97_RS02985 0.54 -1.0 606,186 + ABID97_RS02985 0.54 -0.6 606,186 + ABID97_RS02985 0.54 -1.5 606,186 + ABID97_RS02985 0.54 -1.7 606,187 - ABID97_RS02985 0.54 -0.4 606,187 - ABID97_RS02985 0.54 -0.5 606,187 - ABID97_RS02985 0.54 -0.5 606,453 + -1.0 606,573 + +0.3
Or see this region's nucleotide sequence