Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02095 and ABID97_RS02100 are separated by 54 nucleotides ABID97_RS02100 and ABID97_RS02105 are separated by 18 nucleotides
ABID97_RS02095: ABID97_RS02095 - M48 family metalloprotease, at 419,825 to 421,390
_RS02095
ABID97_RS02100: ABID97_RS02100 - cyclic pyranopterin monophosphate synthase MoaC, at 421,445 to 421,927
_RS02100
ABID97_RS02105: ABID97_RS02105 - Wzy polymerase domain-containing protein, at 421,946 to 423,682
_RS02105
Position (kb) 421
422 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 420.603 kb on + strand, within ABID97_RS02095 at 420.604 kb on - strand, within ABID97_RS02095 at 420.609 kb on + strand, within ABID97_RS02095 at 420.610 kb on - strand, within ABID97_RS02095 at 420.610 kb on - strand, within ABID97_RS02095 at 420.610 kb on - strand, within ABID97_RS02095 at 420.639 kb on + strand, within ABID97_RS02095 at 420.639 kb on + strand, within ABID97_RS02095 at 421.000 kb on - strand, within ABID97_RS02095 at 421.000 kb on - strand, within ABID97_RS02095 at 421.000 kb on - strand, within ABID97_RS02095 at 421.140 kb on + strand, within ABID97_RS02095 at 421.140 kb on + strand, within ABID97_RS02095 at 421.167 kb on + strand, within ABID97_RS02095 at 421.167 kb on + strand, within ABID97_RS02095 at 421.168 kb on - strand, within ABID97_RS02095 at 421.168 kb on - strand, within ABID97_RS02095 at 421.168 kb on - strand, within ABID97_RS02095 at 421.182 kb on + strand, within ABID97_RS02095 at 421.311 kb on - strand at 421.414 kb on + strand at 421.414 kb on + strand at 421.414 kb on + strand at 421.414 kb on + strand at 421.414 kb on + strand at 421.415 kb on - strand at 421.708 kb on + strand, within ABID97_RS02100 at 421.829 kb on + strand, within ABID97_RS02100 at 421.829 kb on + strand, within ABID97_RS02100 at 421.829 kb on + strand, within ABID97_RS02100 at 421.830 kb on - strand, within ABID97_RS02100 at 421.830 kb on - strand, within ABID97_RS02100 at 421.830 kb on - strand, within ABID97_RS02100 at 421.913 kb on + strand at 421.913 kb on + strand at 421.913 kb on + strand at 421.913 kb on + strand at 421.914 kb on - strand at 421.914 kb on - strand at 421.914 kb on - strand at 421.914 kb on - strand at 421.947 kb on + strand at 421.948 kb on - strand at 422.244 kb on + strand, within ABID97_RS02105 at 422.244 kb on + strand, within ABID97_RS02105 at 422.245 kb on - strand, within ABID97_RS02105 at 422.245 kb on - strand, within ABID97_RS02105 at 422.245 kb on - strand, within ABID97_RS02105 at 422.274 kb on + strand, within ABID97_RS02105 at 422.274 kb on + strand, within ABID97_RS02105 at 422.295 kb on + strand, within ABID97_RS02105 at 422.296 kb on - strand, within ABID97_RS02105 at 422.296 kb on - strand, within ABID97_RS02105 at 422.296 kb on - strand, within ABID97_RS02105 at 422.311 kb on - strand, within ABID97_RS02105 at 422.469 kb on + strand, within ABID97_RS02105 at 422.481 kb on + strand, within ABID97_RS02105 at 422.691 kb on + strand, within ABID97_RS02105 at 422.692 kb on - strand, within ABID97_RS02105 at 422.692 kb on - strand, within ABID97_RS02105 at 422.703 kb on + strand, within ABID97_RS02105 at 422.704 kb on - strand, within ABID97_RS02105 at 422.704 kb on - strand, within ABID97_RS02105 at 422.887 kb on - strand, within ABID97_RS02105
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 420,603 + ABID97_RS02095 0.50 -0.2 420,604 - ABID97_RS02095 0.50 -0.5 420,609 + ABID97_RS02095 0.50 -0.2 420,610 - ABID97_RS02095 0.50 -0.0 420,610 - ABID97_RS02095 0.50 -0.4 420,610 - ABID97_RS02095 0.50 -0.7 420,639 + ABID97_RS02095 0.52 +0.2 420,639 + ABID97_RS02095 0.52 -0.1 421,000 - ABID97_RS02095 0.75 -0.1 421,000 - ABID97_RS02095 0.75 +0.4 421,000 - ABID97_RS02095 0.75 +2.2 421,140 + ABID97_RS02095 0.84 +0.6 421,140 + ABID97_RS02095 0.84 -0.4 421,167 + ABID97_RS02095 0.86 -0.6 421,167 + ABID97_RS02095 0.86 +0.2 421,168 - ABID97_RS02095 0.86 +0.1 421,168 - ABID97_RS02095 0.86 -0.1 421,168 - ABID97_RS02095 0.86 -0.7 421,182 + ABID97_RS02095 0.87 +0.2 421,311 - -0.3 421,414 + +0.0 421,414 + +0.2 421,414 + +1.2 421,414 + +0.2 421,414 + -0.2 421,415 - -1.1 421,708 + ABID97_RS02100 0.54 -2.3 421,829 + ABID97_RS02100 0.80 -5.2 421,829 + ABID97_RS02100 0.80 +0.4 421,829 + ABID97_RS02100 0.80 -2.7 421,830 - ABID97_RS02100 0.80 -3.3 421,830 - ABID97_RS02100 0.80 -0.7 421,830 - ABID97_RS02100 0.80 -1.8 421,913 + +0.7 421,913 + -0.4 421,913 + -0.6 421,913 + +0.1 421,914 - -0.6 421,914 - -0.3 421,914 - +0.1 421,914 - -0.1 421,947 + -1.0 421,948 - +0.6 422,244 + ABID97_RS02105 0.17 -0.2 422,244 + ABID97_RS02105 0.17 -0.4 422,245 - ABID97_RS02105 0.17 -1.2 422,245 - ABID97_RS02105 0.17 +0.9 422,245 - ABID97_RS02105 0.17 -0.3 422,274 + ABID97_RS02105 0.19 -0.1 422,274 + ABID97_RS02105 0.19 +0.4 422,295 + ABID97_RS02105 0.20 +0.4 422,296 - ABID97_RS02105 0.20 -0.3 422,296 - ABID97_RS02105 0.20 +0.3 422,296 - ABID97_RS02105 0.20 -0.0 422,311 - ABID97_RS02105 0.21 +0.0 422,469 + ABID97_RS02105 0.30 -1.1 422,481 + ABID97_RS02105 0.31 +0.0 422,691 + ABID97_RS02105 0.43 +0.1 422,692 - ABID97_RS02105 0.43 -0.9 422,692 - ABID97_RS02105 0.43 +0.7 422,703 + ABID97_RS02105 0.44 -0.4 422,704 - ABID97_RS02105 0.44 -0.1 422,704 - ABID97_RS02105 0.44 -0.8 422,887 - ABID97_RS02105 0.54 +0.1
Or see this region's nucleotide sequence