Experiment: Adenine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS00110 and ABID97_RS00115 are separated by 65 nucleotides ABID97_RS00115 and ABID97_RS00120 are separated by 11 nucleotides
ABID97_RS00110: ABID97_RS00110 - SGNH/GDSL hydrolase family protein, at 23,041 to 24,363
_RS00110
ABID97_RS00115: ABID97_RS00115 - carboxyl transferase domain-containing protein, at 24,429 to 27,734
_RS00115
ABID97_RS00120: ABID97_RS00120 - AMP-binding protein, at 27,746 to 29,359
_RS00120
Position (kb) 24
25
26
27
28 Strain fitness (log2 ratio) -1
0
1
2
3 at 23.608 kb on + strand, within ABID97_RS00110 at 24.384 kb on + strand at 24.385 kb on - strand at 24.419 kb on + strand at 24.420 kb on - strand at 24.441 kb on + strand at 24.441 kb on + strand at 24.442 kb on - strand at 24.442 kb on - strand at 24.442 kb on - strand at 24.445 kb on + strand at 24.445 kb on + strand at 24.445 kb on + strand at 24.446 kb on - strand at 24.446 kb on - strand at 24.770 kb on - strand, within ABID97_RS00115 at 25.133 kb on - strand, within ABID97_RS00115 at 25.216 kb on + strand, within ABID97_RS00115 at 25.217 kb on - strand, within ABID97_RS00115 at 25.225 kb on + strand, within ABID97_RS00115 at 25.226 kb on - strand, within ABID97_RS00115 at 25.226 kb on - strand, within ABID97_RS00115 at 25.669 kb on + strand, within ABID97_RS00115 at 25.670 kb on - strand, within ABID97_RS00115 at 25.676 kb on - strand, within ABID97_RS00115 at 25.825 kb on + strand, within ABID97_RS00115 at 26.080 kb on + strand, within ABID97_RS00115 at 26.080 kb on + strand, within ABID97_RS00115 at 26.080 kb on + strand, within ABID97_RS00115 at 26.080 kb on + strand, within ABID97_RS00115 at 26.081 kb on - strand, within ABID97_RS00115 at 26.081 kb on - strand, within ABID97_RS00115 at 26.563 kb on + strand, within ABID97_RS00115 at 26.564 kb on - strand, within ABID97_RS00115 at 26.591 kb on - strand, within ABID97_RS00115 at 26.591 kb on - strand, within ABID97_RS00115 at 27.139 kb on + strand, within ABID97_RS00115 at 27.139 kb on + strand, within ABID97_RS00115 at 27.140 kb on - strand, within ABID97_RS00115 at 27.140 kb on - strand, within ABID97_RS00115 at 27.140 kb on - strand, within ABID97_RS00115 at 27.140 kb on - strand, within ABID97_RS00115 at 27.140 kb on - strand, within ABID97_RS00115 at 27.140 kb on - strand, within ABID97_RS00115 at 27.140 kb on - strand, within ABID97_RS00115 at 27.559 kb on + strand at 27.837 kb on + strand at 27.837 kb on + strand at 27.838 kb on - strand at 27.838 kb on - strand at 27.838 kb on - strand at 28.023 kb on + strand, within ABID97_RS00120 at 28.159 kb on - strand, within ABID97_RS00120 at 28.159 kb on - strand, within ABID97_RS00120 at 28.308 kb on + strand, within ABID97_RS00120 at 28.308 kb on + strand, within ABID97_RS00120 at 28.308 kb on + strand, within ABID97_RS00120 at 28.309 kb on - strand, within ABID97_RS00120 at 28.309 kb on - strand, within ABID97_RS00120 at 28.512 kb on + strand, within ABID97_RS00120 at 28.530 kb on + strand, within ABID97_RS00120 at 28.530 kb on + strand, within ABID97_RS00120 at 28.641 kb on + strand, within ABID97_RS00120 at 28.641 kb on + strand, within ABID97_RS00120
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (C) remove 23,608 + ABID97_RS00110 0.43 +0.7 24,384 + +0.5 24,385 - +0.1 24,419 + +0.3 24,420 - +0.2 24,441 + -0.7 24,441 + +0.3 24,442 - +2.1 24,442 - +0.2 24,442 - -0.1 24,445 + +0.3 24,445 + +2.5 24,445 + -0.7 24,446 - +0.6 24,446 - +1.3 24,770 - ABID97_RS00115 0.10 +0.1 25,133 - ABID97_RS00115 0.21 +0.1 25,216 + ABID97_RS00115 0.24 -0.2 25,217 - ABID97_RS00115 0.24 -0.3 25,225 + ABID97_RS00115 0.24 +0.2 25,226 - ABID97_RS00115 0.24 -0.3 25,226 - ABID97_RS00115 0.24 +0.3 25,669 + ABID97_RS00115 0.38 +0.1 25,670 - ABID97_RS00115 0.38 -0.3 25,676 - ABID97_RS00115 0.38 +0.5 25,825 + ABID97_RS00115 0.42 +3.0 26,080 + ABID97_RS00115 0.50 +0.1 26,080 + ABID97_RS00115 0.50 +0.2 26,080 + ABID97_RS00115 0.50 -1.4 26,080 + ABID97_RS00115 0.50 +0.0 26,081 - ABID97_RS00115 0.50 -0.8 26,081 - ABID97_RS00115 0.50 -0.2 26,563 + ABID97_RS00115 0.65 -0.0 26,564 - ABID97_RS00115 0.65 -0.2 26,591 - ABID97_RS00115 0.65 -0.0 26,591 - ABID97_RS00115 0.65 -0.1 27,139 + ABID97_RS00115 0.82 +0.2 27,139 + ABID97_RS00115 0.82 +0.2 27,140 - ABID97_RS00115 0.82 +0.3 27,140 - ABID97_RS00115 0.82 +0.1 27,140 - ABID97_RS00115 0.82 +0.4 27,140 - ABID97_RS00115 0.82 -0.2 27,140 - ABID97_RS00115 0.82 +0.2 27,140 - ABID97_RS00115 0.82 -0.3 27,140 - ABID97_RS00115 0.82 +0.0 27,559 + -0.4 27,837 + -0.1 27,837 + +0.7 27,838 - +0.2 27,838 - +0.2 27,838 - +0.4 28,023 + ABID97_RS00120 0.17 -0.0 28,159 - ABID97_RS00120 0.26 +0.3 28,159 - ABID97_RS00120 0.26 -0.2 28,308 + ABID97_RS00120 0.35 +0.5 28,308 + ABID97_RS00120 0.35 -0.5 28,308 + ABID97_RS00120 0.35 -0.0 28,309 - ABID97_RS00120 0.35 +0.2 28,309 - ABID97_RS00120 0.35 -0.0 28,512 + ABID97_RS00120 0.47 +0.1 28,530 + ABID97_RS00120 0.49 -0.6 28,530 + ABID97_RS00120 0.49 +0.0 28,641 + ABID97_RS00120 0.55 +0.4 28,641 + ABID97_RS00120 0.55 -0.4
Or see this region's nucleotide sequence