Experiment: Aluminum chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_770 and PfGW456L13_771 are separated by 140 nucleotides PfGW456L13_771 and PfGW456L13_772 are separated by 78 nucleotides
PfGW456L13_770 - Superfamily II DNA and RNA helicases, at 873,957 to 874,328
_770
PfGW456L13_771 - Predicted signal transduction protein, at 874,469 to 875,872
_771
PfGW456L13_772 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 875,951 to 878,026
_772
Position (kb) 874
875
876 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 873.569 kb on + strand at 873.570 kb on - strand at 873.570 kb on - strand at 873.614 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.635 kb on + strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.636 kb on - strand at 873.766 kb on + strand at 873.789 kb on + strand at 873.790 kb on - strand at 873.790 kb on - strand at 873.828 kb on + strand at 873.891 kb on - strand at 874.001 kb on + strand, within PfGW456L13_770 at 874.169 kb on + strand, within PfGW456L13_770 at 874.182 kb on + strand, within PfGW456L13_770 at 874.305 kb on + strand at 874.305 kb on + strand at 874.305 kb on + strand at 874.305 kb on + strand at 874.305 kb on + strand at 874.305 kb on + strand at 874.305 kb on + strand at 874.306 kb on - strand at 874.306 kb on - strand at 874.306 kb on - strand at 874.326 kb on + strand at 874.326 kb on + strand at 874.326 kb on + strand at 874.327 kb on - strand at 874.327 kb on - strand at 874.327 kb on - strand at 874.327 kb on - strand at 874.420 kb on + strand at 874.420 kb on + strand at 874.420 kb on + strand at 874.421 kb on - strand at 874.533 kb on - strand at 874.618 kb on + strand, within PfGW456L13_771 at 874.671 kb on + strand, within PfGW456L13_771 at 874.683 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.800 kb on + strand, within PfGW456L13_771 at 874.801 kb on - strand, within PfGW456L13_771 at 874.801 kb on - strand, within PfGW456L13_771 at 874.801 kb on - strand, within PfGW456L13_771 at 874.801 kb on - strand, within PfGW456L13_771 at 874.801 kb on - strand, within PfGW456L13_771 at 874.915 kb on - strand, within PfGW456L13_771 at 874.915 kb on - strand, within PfGW456L13_771 at 874.986 kb on + strand, within PfGW456L13_771 at 874.986 kb on + strand, within PfGW456L13_771 at 874.986 kb on + strand, within PfGW456L13_771 at 874.986 kb on + strand, within PfGW456L13_771 at 874.987 kb on - strand, within PfGW456L13_771 at 874.987 kb on - strand, within PfGW456L13_771 at 875.005 kb on - strand, within PfGW456L13_771 at 875.148 kb on + strand, within PfGW456L13_771 at 875.148 kb on + strand, within PfGW456L13_771 at 875.148 kb on + strand, within PfGW456L13_771 at 875.149 kb on - strand, within PfGW456L13_771 at 875.152 kb on - strand, within PfGW456L13_771 at 875.320 kb on + strand, within PfGW456L13_771 at 875.542 kb on - strand, within PfGW456L13_771 at 875.711 kb on + strand, within PfGW456L13_771 at 875.712 kb on - strand, within PfGW456L13_771 at 875.790 kb on + strand at 875.791 kb on - strand at 875.880 kb on - strand at 875.889 kb on + strand at 875.889 kb on + strand at 875.889 kb on + strand at 875.889 kb on + strand at 875.890 kb on - strand at 875.890 kb on - strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.905 kb on + strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.906 kb on - strand at 875.907 kb on + strand at 875.907 kb on + strand at 875.907 kb on + strand at 875.964 kb on + strand at 875.965 kb on - strand at 875.965 kb on - strand at 875.965 kb on - strand at 876.104 kb on + strand at 876.104 kb on + strand at 876.104 kb on + strand at 876.105 kb on - strand at 876.105 kb on - strand at 876.105 kb on - strand at 876.105 kb on - strand at 876.240 kb on + strand, within PfGW456L13_772 at 876.240 kb on + strand, within PfGW456L13_772 at 876.241 kb on - strand, within PfGW456L13_772 at 876.241 kb on - strand, within PfGW456L13_772 at 876.241 kb on - strand, within PfGW456L13_772 at 876.241 kb on - strand, within PfGW456L13_772 at 876.241 kb on - strand, within PfGW456L13_772 at 876.711 kb on + strand, within PfGW456L13_772 at 876.819 kb on - strand, within PfGW456L13_772
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2.5 mM remove 873,569 + +0.5 873,570 - +1.1 873,570 - +0.5 873,614 + -0.1 873,635 + +0.4 873,635 + -0.3 873,635 + -0.3 873,635 + -2.1 873,635 + -1.0 873,635 + +0.6 873,635 + -0.7 873,636 - -0.6 873,636 - -0.6 873,636 - -0.7 873,636 - -0.5 873,636 - -0.3 873,636 - -0.1 873,636 - +0.4 873,636 - -0.4 873,636 - +0.3 873,766 + -0.1 873,789 + +0.1 873,790 - -1.1 873,790 - +0.6 873,828 + +0.0 873,891 - -1.6 874,001 + PfGW456L13_770 0.12 -0.4 874,169 + PfGW456L13_770 0.57 -0.5 874,182 + PfGW456L13_770 0.60 -0.7 874,305 + +0.3 874,305 + +0.4 874,305 + +0.3 874,305 + -0.8 874,305 + -0.4 874,305 + -0.2 874,305 + +0.4 874,306 - -0.4 874,306 - +0.4 874,306 - -0.8 874,326 + +0.2 874,326 + -0.7 874,326 + +0.2 874,327 - +0.2 874,327 - +1.2 874,327 - +0.5 874,327 - -1.5 874,420 + -1.2 874,420 + +0.4 874,420 + -0.1 874,421 - -0.3 874,533 - +0.3 874,618 + PfGW456L13_771 0.11 +0.8 874,671 + PfGW456L13_771 0.14 -1.6 874,683 + PfGW456L13_771 0.15 -1.7 874,800 + PfGW456L13_771 0.24 -0.4 874,800 + PfGW456L13_771 0.24 -0.5 874,800 + PfGW456L13_771 0.24 -0.8 874,800 + PfGW456L13_771 0.24 -1.1 874,800 + PfGW456L13_771 0.24 -0.5 874,800 + PfGW456L13_771 0.24 -0.5 874,800 + PfGW456L13_771 0.24 -0.2 874,800 + PfGW456L13_771 0.24 -0.8 874,801 - PfGW456L13_771 0.24 -0.3 874,801 - PfGW456L13_771 0.24 -0.2 874,801 - PfGW456L13_771 0.24 -1.0 874,801 - PfGW456L13_771 0.24 -0.8 874,801 - PfGW456L13_771 0.24 +0.6 874,915 - PfGW456L13_771 0.32 -1.2 874,915 - PfGW456L13_771 0.32 +0.3 874,986 + PfGW456L13_771 0.37 -0.7 874,986 + PfGW456L13_771 0.37 +0.0 874,986 + PfGW456L13_771 0.37 -0.0 874,986 + PfGW456L13_771 0.37 -1.1 874,987 - PfGW456L13_771 0.37 -1.0 874,987 - PfGW456L13_771 0.37 -0.0 875,005 - PfGW456L13_771 0.38 +0.1 875,148 + PfGW456L13_771 0.48 -0.5 875,148 + PfGW456L13_771 0.48 -3.3 875,148 + PfGW456L13_771 0.48 -1.2 875,149 - PfGW456L13_771 0.48 -0.7 875,152 - PfGW456L13_771 0.49 +0.4 875,320 + PfGW456L13_771 0.61 -1.4 875,542 - PfGW456L13_771 0.76 +1.6 875,711 + PfGW456L13_771 0.88 +0.3 875,712 - PfGW456L13_771 0.89 -0.1 875,790 + +1.3 875,791 - +0.4 875,880 - -0.3 875,889 + +0.1 875,889 + -0.2 875,889 + +1.1 875,889 + -0.7 875,890 - +0.9 875,890 - +0.2 875,905 + -0.9 875,905 + +0.1 875,905 + -0.9 875,905 + +0.2 875,905 + +0.4 875,905 + -0.9 875,905 + -0.8 875,905 + -0.6 875,905 + -0.9 875,906 - +1.1 875,906 - -0.6 875,906 - +0.7 875,906 - -0.1 875,906 - +0.9 875,906 - +1.0 875,906 - -0.3 875,906 - -1.0 875,906 - -0.4 875,906 - -0.7 875,906 - -1.0 875,907 + -0.2 875,907 + +0.4 875,907 + +0.2 875,964 + +0.4 875,965 - +2.0 875,965 - -1.4 875,965 - -0.5 876,104 + -1.4 876,104 + -1.6 876,104 + -0.6 876,105 - +0.2 876,105 - -2.3 876,105 - -2.8 876,105 - -0.7 876,240 + PfGW456L13_772 0.14 -1.8 876,240 + PfGW456L13_772 0.14 -0.9 876,241 - PfGW456L13_772 0.14 -0.8 876,241 - PfGW456L13_772 0.14 -3.3 876,241 - PfGW456L13_772 0.14 -1.4 876,241 - PfGW456L13_772 0.14 -2.5 876,241 - PfGW456L13_772 0.14 -1.8 876,711 + PfGW456L13_772 0.37 +0.3 876,819 - PfGW456L13_772 0.42 -1.5
Or see this region's nucleotide sequence