Experiment: Aluminum chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3751 and PfGW456L13_3752 are separated by 162 nucleotides PfGW456L13_3752 and PfGW456L13_3753 are separated by 10 nucleotides PfGW456L13_3753 and PfGW456L13_3754 overlap by 4 nucleotides
PfGW456L13_3751 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 4,224,972 to 4,225,922
_3751
PfGW456L13_3752 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 4,226,085 to 4,226,825
_3752
PfGW456L13_3753 - Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10), at 4,226,836 to 4,227,336
_3753
PfGW456L13_3754 - Ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein (EC 1.14.12.18), at 4,227,333 to 4,228,616
_3754
Position (kb)
4226
4227 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4225.198 kb on - strand, within PfGW456L13_3751 at 4225.358 kb on + strand, within PfGW456L13_3751 at 4225.359 kb on - strand, within PfGW456L13_3751 at 4225.359 kb on - strand, within PfGW456L13_3751 at 4225.360 kb on + strand, within PfGW456L13_3751 at 4225.361 kb on - strand at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.481 kb on + strand, within PfGW456L13_3751 at 4225.513 kb on + strand, within PfGW456L13_3751 at 4225.828 kb on + strand at 4225.828 kb on + strand at 4225.828 kb on + strand at 4225.828 kb on + strand at 4225.828 kb on + strand at 4225.829 kb on - strand at 4225.829 kb on - strand at 4225.937 kb on - strand at 4225.937 kb on - strand at 4225.965 kb on - strand at 4225.965 kb on - strand at 4225.965 kb on - strand at 4225.965 kb on - strand at 4225.965 kb on - strand at 4226.985 kb on - strand, within PfGW456L13_3753 at 4226.985 kb on - strand, within PfGW456L13_3753 at 4227.143 kb on + strand, within PfGW456L13_3753 at 4227.144 kb on - strand, within PfGW456L13_3753 at 4227.150 kb on - strand, within PfGW456L13_3753 at 4227.150 kb on - strand, within PfGW456L13_3753 at 4227.200 kb on + strand, within PfGW456L13_3753 at 4227.200 kb on + strand, within PfGW456L13_3753 at 4227.200 kb on + strand, within PfGW456L13_3753 at 4227.200 kb on + strand, within PfGW456L13_3753 at 4227.200 kb on + strand, within PfGW456L13_3753 at 4227.200 kb on + strand, within PfGW456L13_3753 at 4227.201 kb on - strand, within PfGW456L13_3753 at 4227.201 kb on - strand, within PfGW456L13_3753 at 4227.240 kb on - strand, within PfGW456L13_3753 at 4227.365 kb on - strand at 4227.365 kb on - strand at 4227.365 kb on - strand at 4227.365 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 2.5 mM remove 4,225,198 - PfGW456L13_3751 0.24 -0.7 4,225,358 + PfGW456L13_3751 0.41 -1.1 4,225,359 - PfGW456L13_3751 0.41 +0.4 4,225,359 - PfGW456L13_3751 0.41 -0.3 4,225,360 + PfGW456L13_3751 0.41 -0.4 4,225,361 - +0.9 4,225,361 - PfGW456L13_3751 0.41 -2.5 4,225,361 - PfGW456L13_3751 0.41 -0.9 4,225,361 - PfGW456L13_3751 0.41 -1.1 4,225,361 - PfGW456L13_3751 0.41 +0.2 4,225,481 + PfGW456L13_3751 0.54 -0.4 4,225,513 + PfGW456L13_3751 0.57 -0.1 4,225,828 + -2.4 4,225,828 + -0.1 4,225,828 + +0.3 4,225,828 + -0.6 4,225,828 + +1.8 4,225,829 - +0.0 4,225,829 - +0.0 4,225,937 - +0.9 4,225,937 - +0.7 4,225,965 - +0.4 4,225,965 - -0.7 4,225,965 - -0.5 4,225,965 - -0.1 4,225,965 - +0.9 4,226,985 - PfGW456L13_3753 0.30 -1.1 4,226,985 - PfGW456L13_3753 0.30 -1.3 4,227,143 + PfGW456L13_3753 0.61 -0.6 4,227,144 - PfGW456L13_3753 0.61 -1.5 4,227,150 - PfGW456L13_3753 0.63 +1.3 4,227,150 - PfGW456L13_3753 0.63 -3.2 4,227,200 + PfGW456L13_3753 0.73 -0.5 4,227,200 + PfGW456L13_3753 0.73 -1.0 4,227,200 + PfGW456L13_3753 0.73 -0.4 4,227,200 + PfGW456L13_3753 0.73 +0.1 4,227,200 + PfGW456L13_3753 0.73 -0.8 4,227,200 + PfGW456L13_3753 0.73 +0.8 4,227,201 - PfGW456L13_3753 0.73 -0.2 4,227,201 - PfGW456L13_3753 0.73 +0.5 4,227,240 - PfGW456L13_3753 0.81 -0.1 4,227,365 - -0.1 4,227,365 - -0.6 4,227,365 - +0.9 4,227,365 - -0.0
Or see this region's nucleotide sequence